RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
SREK1-216ENST00000612404 COA5Q86WW8 74 aa8.66□□□□□ -1.02
SREK1-216ENST00000612404 LCE2CQ5TA81 110 aa8.66□□□□□ -1.02
SREK1-216ENST00000612404 S4R3F8 94 aa8.66□□□□□ -1.02
SREK1-216ENST00000612404 CHKB-CPT1BH3BT56 60 aa8.65□□□□□ -1.02
SREK1-216ENST00000612404 LCA10Q71F78 164 aa8.62□□□□□ -1.03
SREK1-216ENST00000612404 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
SREK1-216ENST00000612404 MT1HP80294 61 aa8.53□□□□□ -1.04
SREK1-216ENST00000612404 SPTSSBQ8NFR3 76 aa8.5□□□□□ -1.05
SREK1-216ENST00000612404 M0R2T5 61 aa8.49□□□□□ -1.05
SREK1-216ENST00000612404 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
SREK1-216ENST00000612404 Q1T7F1 81 aa8.45□□□□□ -1.06
SREK1-216ENST00000612404 PRO0628Q9UI54 55 aa8.42□□□□□ -1.06
SREK1-216ENST00000612404 V9GYY9 64 aa8.36□□□□□ -1.07
SREK1-216ENST00000612404 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
SREK1-216ENST00000612404 BRK1Q8WUW1 75 aa8.3□□□□□ -1.08
SREK1-216ENST00000612404 ADM2Q7Z4H4 148 aa8.25□□□□□ -1.09
SREK1-216ENST00000612404 KRTAP10-6P60371 365 aaPredicted RBP8.24□□□□□ -1.09
SREK1-216ENST00000612404 SEC61GP60059 68 aa8.23□□□□□ -1.09
SREK1-216ENST00000612404 H0YAA0 97 aa8.23□□□□□ -1.09
SREK1-216ENST00000612404 PSPHP1O15172 72 aa8.23□□□□□ -1.09
SREK1-216ENST00000612404 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
SREK1-216ENST00000612404 A0A1B0GU69 56 aa8.21□□□□□ -1.09
SREK1-216ENST00000612404 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
SREK1-216ENST00000612404 Q5VV11 94 aa8.18□□□□□ -1.1
SREK1-216ENST00000612404 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
SREK1-216ENST00000612404 P0C880 135 aa8.17□□□□□ -1.1
SREK1-216ENST00000612404 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
SREK1-216ENST00000612404 PRR15LQ9BU68 103 aa8.15□□□□□ -1.1
SREK1-216ENST00000612404 MT2AP02795 61 aa8.13□□□□□ -1.11
SREK1-216ENST00000612404 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
SREK1-216ENST00000612404 MT1FP04733 61 aa8.08□□□□□ -1.12
SREK1-216ENST00000612404 A0A1B0GU33 70 aa8.02□□□□□ -1.13
SREK1-216ENST00000612404 R4GN34 69 aa7.99□□□□□ -1.13
SREK1-216ENST00000612404 A6NED7 52 aa7.97□□□□□ -1.13
SREK1-216ENST00000612404 CRIPTQ9P021 101 aa7.97□□□□□ -1.13
SREK1-216ENST00000612404 M0QZ58 72 aa7.96□□□□□ -1.13
SREK1-216ENST00000612404 CDC42SE1Q9NRR8 79 aa7.94□□□□□ -1.14
SREK1-216ENST00000612404 A8MU10 97 aa7.93□□□□□ -1.14
SREK1-216ENST00000612404 UQCR11O14957 56 aa7.91□□□□□ -1.14
SREK1-216ENST00000612404 KRTAP13-4Q3LI77 160 aa7.91□□□□□ -1.14
SREK1-216ENST00000612404 SPATA8Q6RVD6 105 aa7.91□□□□□ -1.14
SREK1-216ENST00000612404 KRTAP9-3Q9BYQ3 159 aa7.88□□□□□ -1.15
SREK1-216ENST00000612404 PMAIP1Q13794 54 aa7.87□□□□□ -1.15
SREK1-216ENST00000612404 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
SREK1-216ENST00000612404 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
SREK1-216ENST00000612404 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
SREK1-216ENST00000612404 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
SREK1-216ENST00000612404 A0A0D9SG42 100 aa7.8□□□□□ -1.16
SREK1-216ENST00000612404 A6NN06 94 aa7.76□□□□□ -1.17
SREK1-216ENST00000612404 KTN1-AS1Q86SY8 53 aa7.72□□□□□ -1.17
SREK1-216ENST00000612404 LCE2BO14633 110 aa7.7□□□□□ -1.18
SREK1-216ENST00000612404 KRTAP19-8Q3LI54 63 aa7.66□□□□□ -1.18
SREK1-216ENST00000612404 USH2AO75445 5202 aa7.64□□□□□ -1.19
SREK1-216ENST00000612404 LCE2DQ5TA82 110 aaPredicted RBP7.64□□□□□ -1.19
SREK1-216ENST00000612404 SPINT4Q6UDR6 99 aa7.63□□□□□ -1.19
SREK1-216ENST00000612404 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
SREK1-216ENST00000612404 MT1BP07438 61 aa7.59□□□□□ -1.19
SREK1-216ENST00000612404 PLAC4Q8WY50 150 aa7.59□□□□□ -1.19
SREK1-216ENST00000612404 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
SREK1-216ENST00000612404 K7ERS5 55 aa7.51□□□□□ -1.21
SREK1-216ENST00000612404 FSIP2Q5CZC0 6907 aa7.5□□□□□ -1.21
SREK1-216ENST00000612404 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
SREK1-216ENST00000612404 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.21
SREK1-216ENST00000612404 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
SREK1-216ENST00000612404 MT1XP80297 61 aa7.3□□□□□ -1.24
SREK1-216ENST00000612404 PRAC1Q96KF2 57 aa7.29□□□□□ -1.24
SREK1-216ENST00000612404 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
SREK1-216ENST00000612404 PRO2289Q9P1D8 64 aa7.28□□□□□ -1.24
SREK1-216ENST00000612404 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.25
SREK1-216ENST00000612404 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
SREK1-216ENST00000612404 CRCT1Q9UGL9 99 aa7.19□□□□□ -1.26
SREK1-216ENST00000612404 FCGBPQ9Y6R7 5405 aaPredicted RBP7.16□□□□□ -1.26
SREK1-216ENST00000612404 ROMO1P60602 79 aa7.15□□□□□ -1.27
SREK1-216ENST00000612404 TNP1P09430 55 aa7.04□□□□□ -1.28
SREK1-216ENST00000612404 KRTAP10-7P60409 375 aaPredicted RBP7.01□□□□□ -1.29
SREK1-216ENST00000612404 KRTAP25-1Q3LHN0 102 aa7.01□□□□□ -1.29
SREK1-216ENST00000612404 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
SREK1-216ENST00000612404 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
SREK1-216ENST00000612404 KMT2DO14686 5537 aa6.9□□□□□ -1.31
SREK1-216ENST00000612404 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
SREK1-216ENST00000612404 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
SREK1-216ENST00000612404 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
SREK1-216ENST00000612404 LCE3AQ5TA76 89 aa6.78□□□□□ -1.32
SREK1-216ENST00000612404 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
SREK1-216ENST00000612404 PP632Q6XCG6 107 aa6.68□□□□□ -1.34
SREK1-216ENST00000612404 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
SREK1-216ENST00000612404 SYNE2Q8WXH0 6885 aaKnown RBP6.67□□□□□ -1.34
SREK1-216ENST00000612404 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
SREK1-216ENST00000612404 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
SREK1-216ENST00000612404 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
SREK1-216ENST00000612404 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
SREK1-216ENST00000612404 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
SREK1-216ENST00000612404 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.37
SREK1-216ENST00000612404 KRTAP5-9P26371 169 aa6.43□□□□□ -1.38
SREK1-216ENST00000612404 KRTAP6-3Q3LI67 103 aa6.43□□□□□ -1.38
SREK1-216ENST00000612404 MT1EP04732 61 aa6.41□□□□□ -1.38
SREK1-216ENST00000612404 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
SREK1-216ENST00000612404 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
SREK1-216ENST00000612404 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms