RNA–Protein interactions for RNA: ENST00000612233.1

NOP56-219, Transcript of NOP56 ribonucleoprotein, humanhuman

Gene NOP56, Length 2,980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-219ENST00000612233 FAT1Q14517 4588 aa7.36□□□□□ -1.23
NOP56-219ENST00000612233 HSPG2P98160 4391 aa7.34□□□□□ -1.23
NOP56-219ENST00000612233 Q8N1X5 172 aa7.31□□□□□ -1.24
NOP56-219ENST00000612233 Q5VSD8 79 aa7.31□□□□□ -1.24
NOP56-219ENST00000612233 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
NOP56-219ENST00000612233 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
NOP56-219ENST00000612233 FAT3Q8TDW7 4589 aa7.29□□□□□ -1.24
NOP56-219ENST00000612233 RPL37P61927 97 aaKnown RBP7.29□□□□□ -1.24
NOP56-219ENST00000612233 KRTAP3-1Q9BYR8 98 aa7.28□□□□□ -1.24
NOP56-219ENST00000612233 FLG2Q5D862 2391 aaPredicted RBP7.25□□□□□ -1.25
NOP56-219ENST00000612233 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
NOP56-219ENST00000612233 RYR1P21817 5038 aa7.19□□□□□ -1.26
NOP56-219ENST00000612233 MT1HL1P0DM35 61 aa7.18□□□□□ -1.26
NOP56-219ENST00000612233 XP32Q5T750 250 aa7.18□□□□□ -1.26
NOP56-219ENST00000612233 KMT2CQ8NEZ4 4911 aaKnown RBP7.14□□□□□ -1.27
NOP56-219ENST00000612233 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
NOP56-219ENST00000612233 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
NOP56-219ENST00000612233 LRP1Q07954 4544 aaKnown RBP7.09□□□□□ -1.27
NOP56-219ENST00000612233 A0A1B0GU33 70 aa7.06□□□□□ -1.28
NOP56-219ENST00000612233 KRTAP17-1Q9BYP8 105 aa7.05□□□□□ -1.28
NOP56-219ENST00000612233 H0YAA0 97 aa7.03□□□□□ -1.28
NOP56-219ENST00000612233 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
NOP56-219ENST00000612233 RYR3Q15413 4870 aa6.99□□□□□ -1.29
NOP56-219ENST00000612233 S4R3F8 94 aa6.98□□□□□ -1.29
NOP56-219ENST00000612233 MYCBP2O75592 4640 aa6.94□□□□□ -1.3
NOP56-219ENST00000612233 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
NOP56-219ENST00000612233 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.3
NOP56-219ENST00000612233 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
NOP56-219ENST00000612233 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
NOP56-219ENST00000612233 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
NOP56-219ENST00000612233 MUC17Q685J3 4493 aa6.76□□□□□ -1.33
NOP56-219ENST00000612233 M0QZ58 72 aa6.75□□□□□ -1.33
NOP56-219ENST00000612233 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
NOP56-219ENST00000612233 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
NOP56-219ENST00000612233 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
NOP56-219ENST00000612233 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
NOP56-219ENST00000612233 DMBT1Q9UGM3 2413 aaPredicted RBP6.68□□□□□ -1.34
NOP56-219ENST00000612233 R4GN34 69 aa6.67□□□□□ -1.34
NOP56-219ENST00000612233 KRTAP19-2Q3LHN2 52 aa6.58□□□□□ -1.36
NOP56-219ENST00000612233 LRP2P98164 4655 aa6.57□□□□□ -1.36
NOP56-219ENST00000612233 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
NOP56-219ENST00000612233 HERC2O95714 4834 aa6.55□□□□□ -1.36
NOP56-219ENST00000612233 PLAC4Q8WY50 150 aa6.52□□□□□ -1.37
NOP56-219ENST00000612233 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
NOP56-219ENST00000612233 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
NOP56-219ENST00000612233 A0A0D9SG42 100 aa6.48□□□□□ -1.37
NOP56-219ENST00000612233 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
NOP56-219ENST00000612233 ABCA13Q86UQ4 5058 aa6.48□□□□□ -1.37
NOP56-219ENST00000612233 LPAP08519 4548 aa6.47□□□□□ -1.37
NOP56-219ENST00000612233 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
NOP56-219ENST00000612233 HERC1Q15751 4861 aa6.28□□□□□ -1.4
NOP56-219ENST00000612233 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
NOP56-219ENST00000612233 INE1O15225 51 aa6.18□□□□□ -1.42
NOP56-219ENST00000612233 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
NOP56-219ENST00000612233 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.42
NOP56-219ENST00000612233 PP632Q6XCG6 107 aa6.15□□□□□ -1.43
NOP56-219ENST00000612233 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.43
NOP56-219ENST00000612233 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
NOP56-219ENST00000612233 MT1HP80294 61 aa5.99□□□□□ -1.45
NOP56-219ENST00000612233 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
NOP56-219ENST00000612233 TNP1P09430 55 aa5.91□□□□□ -1.46
NOP56-219ENST00000612233 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
NOP56-219ENST00000612233 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
NOP56-219ENST00000612233 MT2AP02795 61 aa5.86□□□□□ -1.47
NOP56-219ENST00000612233 MT1FP04733 61 aa5.8□□□□□ -1.48
NOP56-219ENST00000612233 M0R2T5 61 aa5.79□□□□□ -1.48
NOP56-219ENST00000612233 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
NOP56-219ENST00000612233 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
NOP56-219ENST00000612233 MUC2Q02817 5179 aa5.73□□□□□ -1.49
NOP56-219ENST00000612233 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
NOP56-219ENST00000612233 MT1BP07438 61 aa5.66□□□□□ -1.5
NOP56-219ENST00000612233 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.51
NOP56-219ENST00000612233 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
NOP56-219ENST00000612233 LCE2AQ5TA79 106 aaPredicted RBP5.62□□□□□ -1.51
NOP56-219ENST00000612233 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
NOP56-219ENST00000612233 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
NOP56-219ENST00000612233 MT1XP80297 61 aa5.57□□□□□ -1.52
NOP56-219ENST00000612233 UBR4Q5T4S7 5183 aa5.53□□□□□ -1.52
NOP56-219ENST00000612233 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
NOP56-219ENST00000612233 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
NOP56-219ENST00000612233 LCE2BO14633 110 aa5.33□□□□□ -1.56
NOP56-219ENST00000612233 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
NOP56-219ENST00000612233 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
NOP56-219ENST00000612233 KRTAP10-7P60409 375 aaPredicted RBP5.29□□□□□ -1.56
NOP56-219ENST00000612233 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
NOP56-219ENST00000612233 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
NOP56-219ENST00000612233 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
NOP56-219ENST00000612233 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
NOP56-219ENST00000612233 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
NOP56-219ENST00000612233 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
NOP56-219ENST00000612233 USH2AO75445 5202 aa4.93□□□□□ -1.62
NOP56-219ENST00000612233 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
NOP56-219ENST00000612233 MT1EP04732 61 aa4.87□□□□□ -1.63
NOP56-219ENST00000612233 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
NOP56-219ENST00000612233 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
NOP56-219ENST00000612233 MT1LQ93083 61 aa4.84□□□□□ -1.63
NOP56-219ENST00000612233 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
NOP56-219ENST00000612233 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
NOP56-219ENST00000612233 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
NOP56-219ENST00000612233 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms