RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 A0A1B0GU69 56 aa9.79□□□□□ -0.84
SNAPC3-207ENST00000610884 J3QL48 77 aa9.79□□□□□ -0.84
SNAPC3-207ENST00000610884 HERC1Q15751 4861 aa9.79□□□□□ -0.84
SNAPC3-207ENST00000610884 A8MUU9 505 aa9.76□□□□□ -0.85
SNAPC3-207ENST00000610884 C20orf166-AS1Q96NR2 134 aa9.76□□□□□ -0.85
SNAPC3-207ENST00000610884 XP32Q5T750 250 aa9.74□□□□□ -0.85
SNAPC3-207ENST00000610884 SPATA8Q6RVD6 105 aa9.63□□□□□ -0.87
SNAPC3-207ENST00000610884 MIR22HGQ0VDD5 57 aa9.62□□□□□ -0.87
SNAPC3-207ENST00000610884 PRAC1Q96KF2 57 aa9.62□□□□□ -0.87
SNAPC3-207ENST00000610884 UQCR11O14957 56 aa9.61□□□□□ -0.87
SNAPC3-207ENST00000610884 MUC2Q02817 5179 aa9.6□□□□□ -0.87
SNAPC3-207ENST00000610884 RPL37P61927 97 aaKnown RBP9.59□□□□□ -0.87
SNAPC3-207ENST00000610884 ADM2Q7Z4H4 148 aa9.59□□□□□ -0.87
SNAPC3-207ENST00000610884 TPRXLQ17RH7 258 aa9.52□□□□□ -0.89
SNAPC3-207ENST00000610884 KRTAP3-1Q9BYR8 98 aa9.45□□□□□ -0.9
SNAPC3-207ENST00000610884 HMCN2Q8NDA2 5059 aa9.4□□□□□ -0.9
SNAPC3-207ENST00000610884 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
SNAPC3-207ENST00000610884 KRTAP4-1Q9BYQ7 146 aa9.32□□□□□ -0.92
SNAPC3-207ENST00000610884 LINC01554Q52M75 96 aa9.3□□□□□ -0.92
SNAPC3-207ENST00000610884 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
SNAPC3-207ENST00000610884 UBR4Q5T4S7 5183 aa9.29□□□□□ -0.92
SNAPC3-207ENST00000610884 H0YAA0 97 aa9.29□□□□□ -0.92
SNAPC3-207ENST00000610884 COX6B2Q6YFQ2 88 aa9.26□□□□□ -0.93
SNAPC3-207ENST00000610884 MUC17Q685J3 4493 aa9.24□□□□□ -0.93
SNAPC3-207ENST00000610884 A0A1B0GU33 70 aa9.2□□□□□ -0.94
SNAPC3-207ENST00000610884 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
SNAPC3-207ENST00000610884 H1FX-AS1Q4G0G2 97 aa9.16□□□□□ -0.94
SNAPC3-207ENST00000610884 FAT4Q6V0I7 4981 aa9.08□□□□□ -0.96
SNAPC3-207ENST00000610884 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
SNAPC3-207ENST00000610884 S4R3F8 94 aa9.02□□□□□ -0.97
SNAPC3-207ENST00000610884 KRTAP25-1Q3LHN0 102 aa8.99□□□□□ -0.97
SNAPC3-207ENST00000610884 K7ERS5 55 aa8.94□□□□□ -0.98
SNAPC3-207ENST00000610884 KRTAP19-2Q3LHN2 52 aa8.92□□□□□ -0.98
SNAPC3-207ENST00000610884 CRIPTQ9P021 101 aa8.92□□□□□ -0.98
SNAPC3-207ENST00000610884 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
SNAPC3-207ENST00000610884 KRTAP13-4Q3LI77 160 aa8.82□□□□□ -1
SNAPC3-207ENST00000610884 A0A0D9SG42 100 aa8.82□□□□□ -1
SNAPC3-207ENST00000610884 P0C880 135 aa8.78□□□□□ -1
SNAPC3-207ENST00000610884 ROMO1P60602 79 aa8.77□□□□□ -1.01
SNAPC3-207ENST00000610884 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
SNAPC3-207ENST00000610884 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
SNAPC3-207ENST00000610884 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
SNAPC3-207ENST00000610884 H3BS24 57 aa8.71□□□□□ -1.01
SNAPC3-207ENST00000610884 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
SNAPC3-207ENST00000610884 KRTAP12-2P59991 146 aa8.56□□□□□ -1.04
SNAPC3-207ENST00000610884 C10orf95Q9H7T3 257 aa8.56□□□□□ -1.04
SNAPC3-207ENST00000610884 M0R2T5 61 aa8.55□□□□□ -1.04
SNAPC3-207ENST00000610884 MT1HP80294 61 aa8.53□□□□□ -1.04
SNAPC3-207ENST00000610884 SPINT4Q6UDR6 99 aa8.48□□□□□ -1.05
SNAPC3-207ENST00000610884 KRTAP12-1P59990 96 aa8.45□□□□□ -1.06
SNAPC3-207ENST00000610884 M0QZ58 72 aa8.4□□□□□ -1.06
SNAPC3-207ENST00000610884 R4GN34 69 aa8.37□□□□□ -1.07
SNAPC3-207ENST00000610884 MT1FP04733 61 aa8.22□□□□□ -1.09
SNAPC3-207ENST00000610884 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
SNAPC3-207ENST00000610884 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
SNAPC3-207ENST00000610884 MT2AP02795 61 aa8.21□□□□□ -1.1
SNAPC3-207ENST00000610884 KRTAP10-10P60014 251 aa8.2□□□□□ -1.1
SNAPC3-207ENST00000610884 NDUFAF8A1L188 74 aa8.13□□□□□ -1.11
SNAPC3-207ENST00000610884 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
SNAPC3-207ENST00000610884 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
SNAPC3-207ENST00000610884 USH2AO75445 5202 aa8.03□□□□□ -1.12
SNAPC3-207ENST00000610884 SPRR2GQ9BYE4 73 aa7.95□□□□□ -1.14
SNAPC3-207ENST00000610884 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
SNAPC3-207ENST00000610884 KRTAP9-3Q9BYQ3 159 aa7.89□□□□□ -1.15
SNAPC3-207ENST00000610884 CAMK2N1Q7Z7J9 78 aa7.88□□□□□ -1.15
SNAPC3-207ENST00000610884 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
SNAPC3-207ENST00000610884 LCE2BO14633 110 aa7.77□□□□□ -1.17
SNAPC3-207ENST00000610884 MT1BP07438 61 aa7.74□□□□□ -1.17
SNAPC3-207ENST00000610884 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
SNAPC3-207ENST00000610884 PP632Q6XCG6 107 aa7.66□□□□□ -1.18
SNAPC3-207ENST00000610884 KRTAP10-5P60370 271 aa7.53□□□□□ -1.2
SNAPC3-207ENST00000610884 MT1XP80297 61 aa7.53□□□□□ -1.2
SNAPC3-207ENST00000610884 KMT2DO14686 5537 aa7.49□□□□□ -1.21
SNAPC3-207ENST00000610884 SSPOA2VEC9 5147 aa7.49□□□□□ -1.21
SNAPC3-207ENST00000610884 LUZP6Q538Z0 58 aa7.49□□□□□ -1.21
SNAPC3-207ENST00000610884 TNP1P09430 55 aa7.47□□□□□ -1.21
SNAPC3-207ENST00000610884 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
SNAPC3-207ENST00000610884 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
SNAPC3-207ENST00000610884 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
SNAPC3-207ENST00000610884 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
SNAPC3-207ENST00000610884 SPRR5A0A1B0GTR4 108 aa7.2□□□□□ -1.26
SNAPC3-207ENST00000610884 A0A0A0MQY5 61 aa7.19□□□□□ -1.26
SNAPC3-207ENST00000610884 KRTAP4-8A0A0G2JLE6 195 aa7.15□□□□□ -1.26
SNAPC3-207ENST00000610884 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
SNAPC3-207ENST00000610884 FCGBPQ9Y6R7 5405 aaPredicted RBP7.14□□□□□ -1.27
SNAPC3-207ENST00000610884 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
SNAPC3-207ENST00000610884 LCE2DQ5TA82 110 aaPredicted RBP7.09□□□□□ -1.27
SNAPC3-207ENST00000610884 KRTAP19-6Q3LI70 58 aa7.04□□□□□ -1.28
SNAPC3-207ENST00000610884 KRTAP9-2Q9BYQ4 174 aa7.03□□□□□ -1.28
SNAPC3-207ENST00000610884 MACF1Q9UPN3 7388 aaKnown RBP6.89□□□□□ -1.31
SNAPC3-207ENST00000610884 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
SNAPC3-207ENST00000610884 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
SNAPC3-207ENST00000610884 KRTAP12-3P60328 96 aa6.86□□□□□ -1.31
SNAPC3-207ENST00000610884 SYNE2Q8WXH0 6885 aaKnown RBP6.85□□□□□ -1.31
SNAPC3-207ENST00000610884 MUC12Q9UKN1 5478 aa6.81□□□□□ -1.32
SNAPC3-207ENST00000610884 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
SNAPC3-207ENST00000610884 KRTAP19-7Q3SYF9 63 aa6.72□□□□□ -1.33
SNAPC3-207ENST00000610884 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
SNAPC3-207ENST00000610884 MT1EP04732 61 aa6.54□□□□□ -1.36
SNAPC3-207ENST00000610884 MDN1Q9NU22 5596 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms