RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
TNIP1-220ENST00000610535 ROMO1P60602 79 aa8.85□□□□□ -0.99
TNIP1-220ENST00000610535 A0A0D9SG42 100 aa8.79□□□□□ -1
TNIP1-220ENST00000610535 KRTAP10-6P60371 365 aaPredicted RBP8.76□□□□□ -1.01
TNIP1-220ENST00000610535 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
TNIP1-220ENST00000610535 KRTAP13-4Q3LI77 160 aa8.75□□□□□ -1.01
TNIP1-220ENST00000610535 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
TNIP1-220ENST00000610535 HSPG2P98160 4391 aa8.73□□□□□ -1.01
TNIP1-220ENST00000610535 KIAA1109Q2LD37 5005 aa8.72□□□□□ -1.01
TNIP1-220ENST00000610535 RPL37P61927 97 aaKnown RBP8.7□□□□□ -1.02
TNIP1-220ENST00000610535 KRTAP17-1Q9BYP8 105 aa8.69□□□□□ -1.02
TNIP1-220ENST00000610535 KRTAP3-2Q9BYR7 98 aa8.68□□□□□ -1.02
TNIP1-220ENST00000610535 Q5VSD8 79 aa8.67□□□□□ -1.02
TNIP1-220ENST00000610535 FAT3Q8TDW7 4589 aa8.66□□□□□ -1.02
TNIP1-220ENST00000610535 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
TNIP1-220ENST00000610535 P0C880 135 aa8.64□□□□□ -1.03
TNIP1-220ENST00000610535 EPPK1P58107 5090 aaKnown RBP8.61□□□□□ -1.03
TNIP1-220ENST00000610535 TPRXLQ17RH7 258 aa8.61□□□□□ -1.03
TNIP1-220ENST00000610535 TNXBP22105 4242 aa8.61□□□□□ -1.03
TNIP1-220ENST00000610535 C10orf95Q9H7T3 257 aa8.6□□□□□ -1.03
TNIP1-220ENST00000610535 RYR1P21817 5038 aa8.59□□□□□ -1.03
TNIP1-220ENST00000610535 S4R3F8 94 aa8.59□□□□□ -1.03
TNIP1-220ENST00000610535 SPINT4Q6UDR6 99 aa8.55□□□□□ -1.04
TNIP1-220ENST00000610535 XP32Q5T750 250 aa8.52□□□□□ -1.04
TNIP1-220ENST00000610535 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
TNIP1-220ENST00000610535 LPAP08519 4548 aa8.4□□□□□ -1.06
TNIP1-220ENST00000610535 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
TNIP1-220ENST00000610535 ABCA13Q86UQ4 5058 aa8.36□□□□□ -1.07
TNIP1-220ENST00000610535 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
TNIP1-220ENST00000610535 MT1HL1P0DM35 61 aa8.33□□□□□ -1.08
TNIP1-220ENST00000610535 LRP2P98164 4655 aa8.33□□□□□ -1.08
TNIP1-220ENST00000610535 NDUFAF8A1L188 74 aa8.29□□□□□ -1.08
TNIP1-220ENST00000610535 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
TNIP1-220ENST00000610535 M0QZ58 72 aa8.19□□□□□ -1.1
TNIP1-220ENST00000610535 HERC2O95714 4834 aa8.06□□□□□ -1.12
TNIP1-220ENST00000610535 R4GN34 69 aa8.01□□□□□ -1.13
TNIP1-220ENST00000610535 MUC2Q02817 5179 aa7.98□□□□□ -1.13
TNIP1-220ENST00000610535 J3QL48 77 aa7.97□□□□□ -1.13
TNIP1-220ENST00000610535 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
TNIP1-220ENST00000610535 HERC1Q15751 4861 aa7.86□□□□□ -1.15
TNIP1-220ENST00000610535 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
TNIP1-220ENST00000610535 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
TNIP1-220ENST00000610535 MUC17Q685J3 4493 aa7.79□□□□□ -1.16
TNIP1-220ENST00000610535 PCLOQ9Y6V0 5065 aa7.79□□□□□ -1.16
TNIP1-220ENST00000610535 BIRC6Q9NR09 4857 aa7.77□□□□□ -1.17
TNIP1-220ENST00000610535 SEC61BP60468 96 aaKnown RBP7.72□□□□□ -1.17
TNIP1-220ENST00000610535 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
TNIP1-220ENST00000610535 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
TNIP1-220ENST00000610535 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
TNIP1-220ENST00000610535 PP632Q6XCG6 107 aa7.55□□□□□ -1.2
TNIP1-220ENST00000610535 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
TNIP1-220ENST00000610535 LUZP6Q538Z0 58 aa7.52□□□□□ -1.21
TNIP1-220ENST00000610535 HMCN2Q8NDA2 5059 aa7.51□□□□□ -1.21
TNIP1-220ENST00000610535 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
TNIP1-220ENST00000610535 FLGP20930 4061 aaPredicted RBP7.37□□□□□ -1.23
TNIP1-220ENST00000610535 TNP1P09430 55 aa7.35□□□□□ -1.23
TNIP1-220ENST00000610535 A0A0A0MQY5 61 aa7.29□□□□□ -1.24
TNIP1-220ENST00000610535 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
TNIP1-220ENST00000610535 M0R2T5 61 aa7.18□□□□□ -1.26
TNIP1-220ENST00000610535 SPRR5A0A1B0GTR4 108 aa7.17□□□□□ -1.26
TNIP1-220ENST00000610535 LCE2CQ5TA81 110 aa7.15□□□□□ -1.26
TNIP1-220ENST00000610535 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
TNIP1-220ENST00000610535 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
TNIP1-220ENST00000610535 MT1HP80294 61 aa7□□□□□ -1.29
TNIP1-220ENST00000610535 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
TNIP1-220ENST00000610535 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
TNIP1-220ENST00000610535 MT1FP04733 61 aa6.88□□□□□ -1.31
TNIP1-220ENST00000610535 MT2AP02795 61 aa6.84□□□□□ -1.31
TNIP1-220ENST00000610535 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
TNIP1-220ENST00000610535 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
TNIP1-220ENST00000610535 KRTAP10-5P60370 271 aa6.68□□□□□ -1.34
TNIP1-220ENST00000610535 KRTAP19-8Q3LI54 63 aa6.67□□□□□ -1.34
TNIP1-220ENST00000610535 USH2AO75445 5202 aa6.67□□□□□ -1.34
TNIP1-220ENST00000610535 MT1XP80297 61 aa6.66□□□□□ -1.34
TNIP1-220ENST00000610535 MT1BP07438 61 aa6.65□□□□□ -1.35
TNIP1-220ENST00000610535 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
TNIP1-220ENST00000610535 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
TNIP1-220ENST00000610535 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
TNIP1-220ENST00000610535 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
TNIP1-220ENST00000610535 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
TNIP1-220ENST00000610535 INE1O15225 51 aa6.47□□□□□ -1.37
TNIP1-220ENST00000610535 KMT2DO14686 5537 aa6.41□□□□□ -1.38
TNIP1-220ENST00000610535 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
TNIP1-220ENST00000610535 LCE2BO14633 110 aa6.36□□□□□ -1.39
TNIP1-220ENST00000610535 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
TNIP1-220ENST00000610535 LCE2AQ5TA79 106 aaPredicted RBP6.28□□□□□ -1.4
TNIP1-220ENST00000610535 LCE3CQ5T5A8 94 aa6.24□□□□□ -1.41
TNIP1-220ENST00000610535 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
TNIP1-220ENST00000610535 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
TNIP1-220ENST00000610535 KRTAP9-6A8MVA2 160 aa6.12□□□□□ -1.43
TNIP1-220ENST00000610535 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
TNIP1-220ENST00000610535 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
TNIP1-220ENST00000610535 KRTAP19-7Q3SYF9 63 aa5.94□□□□□ -1.46
TNIP1-220ENST00000610535 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
TNIP1-220ENST00000610535 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
TNIP1-220ENST00000610535 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
TNIP1-220ENST00000610535 MT1LQ93083 61 aa5.77□□□□□ -1.49
TNIP1-220ENST00000610535 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
TNIP1-220ENST00000610535 MT1EP04732 61 aa5.72□□□□□ -1.49
TNIP1-220ENST00000610535 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms