RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 H0Y9P7 68 aa7.83□□□□□ -1.16
PRKN-208ENST00000610470 Q5VV11 94 aa7.83□□□□□ -1.16
PRKN-208ENST00000610470 SPRR2GQ9BYE4 73 aa7.82□□□□□ -1.16
PRKN-208ENST00000610470 MT1BP07438 61 aa7.8□□□□□ -1.16
PRKN-208ENST00000610470 A6NN06 94 aa7.79□□□□□ -1.16
PRKN-208ENST00000610470 K7ERU9 68 aa7.79□□□□□ -1.16
PRKN-208ENST00000610470 ATOX1O00244 68 aa7.79□□□□□ -1.16
PRKN-208ENST00000610470 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
PRKN-208ENST00000610470 KLKP1Q107X0 134 aa7.78□□□□□ -1.16
PRKN-208ENST00000610470 OCR1Q9BZK8 76 aa7.78□□□□□ -1.16
PRKN-208ENST00000610470 LINC00208Q96KT6 92 aa7.73□□□□□ -1.17
PRKN-208ENST00000610470 MT-ATP8P03928 68 aa7.72□□□□□ -1.17
PRKN-208ENST00000610470 SCGB1A1P11684 91 aa7.71□□□□□ -1.18
PRKN-208ENST00000610470 MP68P56378 58 aa7.71□□□□□ -1.18
PRKN-208ENST00000610470 IMUPQ9GZP8 106 aa7.69□□□□□ -1.18
PRKN-208ENST00000610470 CRIPTQ9P021 101 aa7.69□□□□□ -1.18
PRKN-208ENST00000610470 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
PRKN-208ENST00000610470 NDUFC1O43677 76 aa7.63□□□□□ -1.19
PRKN-208ENST00000610470 H3BS24 57 aa7.62□□□□□ -1.19
PRKN-208ENST00000610470 H3BPC8 53 aa7.6□□□□□ -1.19
PRKN-208ENST00000610470 NEBP20929 6669 aa7.6□□□□□ -1.19
PRKN-208ENST00000610470 H0YAA0 97 aa7.58□□□□□ -1.2
PRKN-208ENST00000610470 MUC12Q9UKN1 5478 aa7.57□□□□□ -1.2
PRKN-208ENST00000610470 A8MUN3 132 aa7.57□□□□□ -1.2
PRKN-208ENST00000610470 SMIM20Q8N5G0 67 aa7.53□□□□□ -1.2
PRKN-208ENST00000610470 TRAV7A0A075B6U4 112 aa7.52□□□□□ -1.21
PRKN-208ENST00000610470 ADM2Q7Z4H4 148 aa7.49□□□□□ -1.21
PRKN-208ENST00000610470 KRTAP5-9P26371 169 aa7.44□□□□□ -1.22
PRKN-208ENST00000610470 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
PRKN-208ENST00000610470 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
PRKN-208ENST00000610470 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
PRKN-208ENST00000610470 KMT2DO14686 5537 aa7.37□□□□□ -1.23
PRKN-208ENST00000610470 MDN1Q9NU22 5596 aa7.35□□□□□ -1.23
PRKN-208ENST00000610470 SERP2Q8N6R1 65 aa7.35□□□□□ -1.23
PRKN-208ENST00000610470 C20orf197Q8N268 126 aa7.34□□□□□ -1.23
PRKN-208ENST00000610470 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
PRKN-208ENST00000610470 KRTAP20-1Q3LI63 56 aa7.33□□□□□ -1.24
PRKN-208ENST00000610470 R4GN34 69 aa7.33□□□□□ -1.24
PRKN-208ENST00000610470 ACYP2P14621 99 aa7.3□□□□□ -1.24
PRKN-208ENST00000610470 MT1XP80297 61 aa7.29□□□□□ -1.24
PRKN-208ENST00000610470 P0C880 135 aa7.28□□□□□ -1.24
PRKN-208ENST00000610470 M0QZ58 72 aa7.25□□□□□ -1.25
PRKN-208ENST00000610470 SPANXA2-OT1Q8N9U9 137 aa7.2□□□□□ -1.26
PRKN-208ENST00000610470 SPRR2FQ96RM1 72 aa7.2□□□□□ -1.26
PRKN-208ENST00000610470 COX7CP15954 63 aa7.18□□□□□ -1.26
PRKN-208ENST00000610470 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
PRKN-208ENST00000610470 KRTAP12-2P59991 146 aa7.16□□□□□ -1.26
PRKN-208ENST00000610470 LINC01554Q52M75 96 aa7.15□□□□□ -1.26
PRKN-208ENST00000610470 KRTAP8-1Q8IUC2 63 aa7.15□□□□□ -1.26
PRKN-208ENST00000610470 SPTSSBQ8NFR3 76 aa7.15□□□□□ -1.26
PRKN-208ENST00000610470 SPRR2EP22531 72 aa7.13□□□□□ -1.27
PRKN-208ENST00000610470 SPRR2BP35325 72 aa7.13□□□□□ -1.27
PRKN-208ENST00000610470 SPRR2AP35326 72 aa7.13□□□□□ -1.27
PRKN-208ENST00000610470 KRTAP2-3P0C7H8 128 aa7.11□□□□□ -1.27
PRKN-208ENST00000610470 KRTAP2-4Q9BYR9 128 aa7.11□□□□□ -1.27
PRKN-208ENST00000610470 CYSTM1Q9H1C7 97 aa7.07□□□□□ -1.28
PRKN-208ENST00000610470 ANAPC13Q9BS18 74 aa7.06□□□□□ -1.28
PRKN-208ENST00000610470 H7BZZ5 65 aa7.03□□□□□ -1.28
PRKN-208ENST00000610470 COA5Q86WW8 74 aa7.01□□□□□ -1.29
PRKN-208ENST00000610470 LCE1AQ5T7P2 110 aa7□□□□□ -1.29
PRKN-208ENST00000610470 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
PRKN-208ENST00000610470 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
PRKN-208ENST00000610470 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
PRKN-208ENST00000610470 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
PRKN-208ENST00000610470 CCDC179H3BU77 68 aa6.92□□□□□ -1.3
PRKN-208ENST00000610470 SPRR2DP22532 72 aa6.89□□□□□ -1.31
PRKN-208ENST00000610470 KRTAP2-2Q9BYT5 123 aa6.88□□□□□ -1.31
PRKN-208ENST00000610470 KRTAP2-1Q9BYU5 128 aa6.88□□□□□ -1.31
PRKN-208ENST00000610470 SEC61GP60059 68 aa6.8□□□□□ -1.32
PRKN-208ENST00000610470 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
PRKN-208ENST00000610470 SERP1Q9Y6X1 66 aa6.79□□□□□ -1.32
PRKN-208ENST00000610470 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
PRKN-208ENST00000610470 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
PRKN-208ENST00000610470 LCE3BQ5TA77 95 aa6.71□□□□□ -1.34
PRKN-208ENST00000610470 A0A1B0GU33 70 aa6.67□□□□□ -1.34
PRKN-208ENST00000610470 SPATA8Q6RVD6 105 aa6.66□□□□□ -1.34
PRKN-208ENST00000610470 A0A1B0GU69 56 aa6.65□□□□□ -1.34
PRKN-208ENST00000610470 SVIPQ8NHG7 77 aa6.65□□□□□ -1.34
PRKN-208ENST00000610470 A0A0D9SG42 100 aa6.63□□□□□ -1.35
PRKN-208ENST00000610470 TMEM258P61165 79 aa6.63□□□□□ -1.35
PRKN-208ENST00000610470 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
PRKN-208ENST00000610470 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
PRKN-208ENST00000610470 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
PRKN-208ENST00000610470 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
PRKN-208ENST00000610470 PRR15LQ9BU68 103 aa6.5□□□□□ -1.37
PRKN-208ENST00000610470 LINC01558Q9Y6Z2 57 aa6.5□□□□□ -1.37
PRKN-208ENST00000610470 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
PRKN-208ENST00000610470 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
PRKN-208ENST00000610470 SMIM26A0A096LP01 95 aa6.47□□□□□ -1.37
PRKN-208ENST00000610470 MT1EP04732 61 aa6.47□□□□□ -1.37
PRKN-208ENST00000610470 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
PRKN-208ENST00000610470 A8MU10 97 aa6.46□□□□□ -1.38
PRKN-208ENST00000610470 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
PRKN-208ENST00000610470 DSTQ03001 7570 aaKnown RBP6.4□□□□□ -1.39
PRKN-208ENST00000610470 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
PRKN-208ENST00000610470 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
PRKN-208ENST00000610470 UQCR11O14957 56 aa6.3□□□□□ -1.4
PRKN-208ENST00000610470 MT1GP13640 62 aa6.3□□□□□ -1.4
PRKN-208ENST00000610470 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
PRKN-208ENST00000610470 PCP4P48539 62 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms