RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 LINC01558Q9Y6Z2 57 aa11.32□□□□□ -0.6
COMMD7-204ENST00000610160 S4R3F8 94 aa11.32□□□□□ -0.6
COMMD7-204ENST00000610160 LCA10Q71F78 164 aa11.3□□□□□ -0.6
COMMD7-204ENST00000610160 PSPHP1O15172 72 aa11.26□□□□□ -0.61
COMMD7-204ENST00000610160 KRTAP3-3Q9BYR6 98 aa11.25□□□□□ -0.61
COMMD7-204ENST00000610160 PRR15LQ9BU68 103 aa11.25□□□□□ -0.61
COMMD7-204ENST00000610160 MUC2Q02817 5179 aa11.23□□□□□ -0.61
COMMD7-204ENST00000610160 KRTAP19-2Q3LHN2 52 aa11.21□□□□□ -0.62
COMMD7-204ENST00000610160 UBR4Q5T4S7 5183 aa11.18□□□□□ -0.62
COMMD7-204ENST00000610160 Q5VV11 94 aa11.16□□□□□ -0.62
COMMD7-204ENST00000610160 A0A1B0GU69 56 aa11.14□□□□□ -0.63
COMMD7-204ENST00000610160 RNF213Q63HN8 5207 aa11.08□□□□□ -0.64
COMMD7-204ENST00000610160 SEC61GP60059 68 aa11.06□□□□□ -0.64
COMMD7-204ENST00000610160 CSAG1Q6PB30 78 aa11.04□□□□□ -0.64
COMMD7-204ENST00000610160 FLGP20930 4061 aaPredicted RBP10.95□□□□□ -0.66
COMMD7-204ENST00000610160 LCE2CQ5TA81 110 aa10.92□□□□□ -0.66
COMMD7-204ENST00000610160 A6NED7 52 aa10.9□□□□□ -0.66
COMMD7-204ENST00000610160 KRTAP3-2Q9BYR7 98 aa10.86□□□□□ -0.67
COMMD7-204ENST00000610160 KRTAP10-6P60371 365 aaPredicted RBP10.85□□□□□ -0.67
COMMD7-204ENST00000610160 BRK1Q8WUW1 75 aa10.83□□□□□ -0.68
COMMD7-204ENST00000610160 H0YAA0 97 aa10.82□□□□□ -0.68
COMMD7-204ENST00000610160 UQCR11O14957 56 aa10.81□□□□□ -0.68
COMMD7-204ENST00000610160 ADM2Q7Z4H4 148 aa10.81□□□□□ -0.68
COMMD7-204ENST00000610160 A0A1B0GU33 70 aa10.79□□□□□ -0.68
COMMD7-204ENST00000610160 P0C880 135 aa10.77□□□□□ -0.69
COMMD7-204ENST00000610160 FAT4Q6V0I7 4981 aa10.76□□□□□ -0.69
COMMD7-204ENST00000610160 CDC42SE1Q9NRR8 79 aa10.72□□□□□ -0.69
COMMD7-204ENST00000610160 MT1HP80294 61 aa10.7□□□□□ -0.7
COMMD7-204ENST00000610160 MIR22HGQ0VDD5 57 aa10.7□□□□□ -0.7
COMMD7-204ENST00000610160 A8MU10 97 aa10.69□□□□□ -0.7
COMMD7-204ENST00000610160 SPATA8Q6RVD6 105 aa10.67□□□□□ -0.7
COMMD7-204ENST00000610160 M0R2T5 61 aa10.6□□□□□ -0.71
COMMD7-204ENST00000610160 PRO0628Q9UI54 55 aa10.59□□□□□ -0.71
COMMD7-204ENST00000610160 KRTAP13-4Q3LI77 160 aa10.57□□□□□ -0.72
COMMD7-204ENST00000610160 M0QZ58 72 aa10.48□□□□□ -0.73
COMMD7-204ENST00000610160 LORP23490 312 aaPredicted RBP10.46□□□□□ -0.74
COMMD7-204ENST00000610160 R4GN34 69 aa10.43□□□□□ -0.74
COMMD7-204ENST00000610160 A0A0D9SG42 100 aa10.37□□□□□ -0.75
COMMD7-204ENST00000610160 CRIPTQ9P021 101 aa10.32□□□□□ -0.76
COMMD7-204ENST00000610160 KRTAP9-8Q9BYQ0 159 aa10.31□□□□□ -0.76
COMMD7-204ENST00000610160 MT2AP02795 61 aa10.3□□□□□ -0.76
COMMD7-204ENST00000610160 LCE2AQ5TA79 106 aaPredicted RBP10.25□□□□□ -0.77
COMMD7-204ENST00000610160 MT1FP04733 61 aa10.25□□□□□ -0.77
COMMD7-204ENST00000610160 LINC01554Q52M75 96 aa10.25□□□□□ -0.77
COMMD7-204ENST00000610160 PMAIP1Q13794 54 aa10.22□□□□□ -0.77
COMMD7-204ENST00000610160 KRTAP10-10P60014 251 aa10.2□□□□□ -0.78
COMMD7-204ENST00000610160 K7ERS5 55 aa10.19□□□□□ -0.78
COMMD7-204ENST00000610160 A6NN06 94 aa10.17□□□□□ -0.78
COMMD7-204ENST00000610160 KRTAP12-1P59990 96 aa10.17□□□□□ -0.78
COMMD7-204ENST00000610160 KRTAP12-2P59991 146 aa10.15□□□□□ -0.78
COMMD7-204ENST00000610160 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
COMMD7-204ENST00000610160 SPRR2GQ9BYE4 73 aa10.11□□□□□ -0.79
COMMD7-204ENST00000610160 KRTAP19-1Q8IUB9 90 aa10.08□□□□□ -0.8
COMMD7-204ENST00000610160 KRTAP9-3Q9BYQ3 159 aa9.94□□□□□ -0.82
COMMD7-204ENST00000610160 KRTAP19-8Q3LI54 63 aa9.83□□□□□ -0.84
COMMD7-204ENST00000610160 KTN1-AS1Q86SY8 53 aa9.81□□□□□ -0.84
COMMD7-204ENST00000610160 ROMO1P60602 79 aa9.79□□□□□ -0.84
COMMD7-204ENST00000610160 CAMK2N1Q7Z7J9 78 aa9.77□□□□□ -0.84
COMMD7-204ENST00000610160 PLAC4Q8WY50 150 aa9.77□□□□□ -0.85
COMMD7-204ENST00000610160 SVIPQ8NHG7 77 aa9.75□□□□□ -0.85
COMMD7-204ENST00000610160 MT1BP07438 61 aa9.7□□□□□ -0.86
COMMD7-204ENST00000610160 LCE2BO14633 110 aa9.65□□□□□ -0.86
COMMD7-204ENST00000610160 C10orf95Q9H7T3 257 aa9.61□□□□□ -0.87
COMMD7-204ENST00000610160 PRAC1Q96KF2 57 aa9.59□□□□□ -0.87
COMMD7-204ENST00000610160 USH2AO75445 5202 aa9.41□□□□□ -0.9
COMMD7-204ENST00000610160 MT1XP80297 61 aa9.41□□□□□ -0.9
COMMD7-204ENST00000610160 KRTAP10-5P60370 271 aa9.39□□□□□ -0.91
COMMD7-204ENST00000610160 KRTAP25-1Q3LHN0 102 aa9.36□□□□□ -0.91
COMMD7-204ENST00000610160 TNP1P09430 55 aa9.3□□□□□ -0.92
COMMD7-204ENST00000610160 PRO2289Q9P1D8 64 aa9.28□□□□□ -0.92
COMMD7-204ENST00000610160 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
COMMD7-204ENST00000610160 SSPOA2VEC9 5147 aa9.12□□□□□ -0.95
COMMD7-204ENST00000610160 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
COMMD7-204ENST00000610160 KRTAP19-6Q3LI70 58 aa9.04□□□□□ -0.96
COMMD7-204ENST00000610160 KRTAP23-1A1A580 65 aa9.03□□□□□ -0.96
COMMD7-204ENST00000610160 KRTAP10-7P60409 375 aaPredicted RBP9.03□□□□□ -0.96
COMMD7-204ENST00000610160 FSIP2Q5CZC0 6907 aa9.02□□□□□ -0.97
COMMD7-204ENST00000610160 KRTAP10-12P60413 245 aa8.95□□□□□ -0.98
COMMD7-204ENST00000610160 LCE3AQ5TA76 89 aa8.92□□□□□ -0.98
COMMD7-204ENST00000610160 KRTAP9-2Q9BYQ4 174 aa8.9□□□□□ -0.99
COMMD7-204ENST00000610160 KRTAP8-1Q8IUC2 63 aa8.73□□□□□ -1.01
COMMD7-204ENST00000610160 FCGBPQ9Y6R7 5405 aaPredicted RBP8.69□□□□□ -1.02
COMMD7-204ENST00000610160 KRTAP4-8A0A0G2JLE6 195 aa8.66□□□□□ -1.02
COMMD7-204ENST00000610160 KRTAP4-8Q9BYQ9 185 aa8.66□□□□□ -1.02
COMMD7-204ENST00000610160 KMT2DO14686 5537 aa8.63□□□□□ -1.03
COMMD7-204ENST00000610160 CRCT1Q9UGL9 99 aa8.58□□□□□ -1.04
COMMD7-204ENST00000610160 KRTAP12-3P60328 96 aa8.55□□□□□ -1.04
COMMD7-204ENST00000610160 KRTAP19-5Q3LI72 72 aa8.5□□□□□ -1.05
COMMD7-204ENST00000610160 KRTAP19-7Q3SYF9 63 aa8.39□□□□□ -1.07
COMMD7-204ENST00000610160 KRTAP15-1Q3LI76 137 aa8.39□□□□□ -1.07
COMMD7-204ENST00000610160 MACF1Q9UPN3 7388 aaKnown RBP8.26□□□□□ -1.09
COMMD7-204ENST00000610160 MT1EP04732 61 aa8.24□□□□□ -1.09
COMMD7-204ENST00000610160 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
COMMD7-204ENST00000610160 MT1LQ93083 61 aa8.08□□□□□ -1.12
COMMD7-204ENST00000610160 SPRR5A0A1B0GTR4 108 aa8.05□□□□□ -1.12
COMMD7-204ENST00000610160 SPRR2FQ96RM1 72 aa8.05□□□□□ -1.12
COMMD7-204ENST00000610160 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.13
COMMD7-204ENST00000610160 LCE3CQ5T5A8 94 aa7.99□□□□□ -1.13
COMMD7-204ENST00000610160 MUC12Q9UKN1 5478 aa7.98□□□□□ -1.13
COMMD7-204ENST00000610160 KRTAP19-4Q3LI73 84 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms