RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
ITGB5-211ENST00000608107 H7BZZ5 65 aa4.91□□□□□ -1.62
ITGB5-211ENST00000608107 SPANXA2-OT1Q8N9U9 137 aa4.9□□□□□ -1.63
ITGB5-211ENST00000608107 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
ITGB5-211ENST00000608107 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
ITGB5-211ENST00000608107 NDUFC1O43677 76 aa4.87□□□□□ -1.63
ITGB5-211ENST00000608107 ACYP2P14621 99 aa4.87□□□□□ -1.63
ITGB5-211ENST00000608107 MT2AP02795 61 aa4.86□□□□□ -1.63
ITGB5-211ENST00000608107 CSAG1Q6PB30 78 aa4.86□□□□□ -1.63
ITGB5-211ENST00000608107 MT1FP04733 61 aa4.83□□□□□ -1.64
ITGB5-211ENST00000608107 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
ITGB5-211ENST00000608107 COA5Q86WW8 74 aa4.78□□□□□ -1.64
ITGB5-211ENST00000608107 CHKB-CPT1BH3BT56 60 aa4.77□□□□□ -1.65
ITGB5-211ENST00000608107 PCP4P48539 62 aa4.76□□□□□ -1.65
ITGB5-211ENST00000608107 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
ITGB5-211ENST00000608107 TMEM258P61165 79 aa4.72□□□□□ -1.65
ITGB5-211ENST00000608107 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
ITGB5-211ENST00000608107 LCE2DQ5TA82 110 aaPredicted RBP4.71□□□□□ -1.66
ITGB5-211ENST00000608107 SPTSSBQ8NFR3 76 aa4.71□□□□□ -1.66
ITGB5-211ENST00000608107 H0YAA0 97 aa4.7□□□□□ -1.66
ITGB5-211ENST00000608107 ATP5EP56381 51 aaPredicted RBP4.7□□□□□ -1.66
ITGB5-211ENST00000608107 KRTAP3-2Q9BYR7 98 aa4.69□□□□□ -1.66
ITGB5-211ENST00000608107 P0C880 135 aa4.68□□□□□ -1.66
ITGB5-211ENST00000608107 LCE2BO14633 110 aa4.66□□□□□ -1.66
ITGB5-211ENST00000608107 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
ITGB5-211ENST00000608107 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
ITGB5-211ENST00000608107 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
ITGB5-211ENST00000608107 SERP1Q9Y6X1 66 aa4.59□□□□□ -1.67
ITGB5-211ENST00000608107 CRIPTQ9P021 101 aa4.57□□□□□ -1.68
ITGB5-211ENST00000608107 M0QZ58 72 aa4.54□□□□□ -1.68
ITGB5-211ENST00000608107 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
ITGB5-211ENST00000608107 R4GN34 69 aa4.53□□□□□ -1.68
ITGB5-211ENST00000608107 MT1BP07438 61 aa4.52□□□□□ -1.69
ITGB5-211ENST00000608107 SEC61GP60059 68 aa4.52□□□□□ -1.69
ITGB5-211ENST00000608107 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
ITGB5-211ENST00000608107 FSIP2Q5CZC0 6907 aa4.5□□□□□ -1.69
ITGB5-211ENST00000608107 A0A1B0GU69 56 aa4.5□□□□□ -1.69
ITGB5-211ENST00000608107 LINC01558Q9Y6Z2 57 aa4.5□□□□□ -1.69
ITGB5-211ENST00000608107 USH2AO75445 5202 aa4.49□□□□□ -1.69
ITGB5-211ENST00000608107 LINC01554Q52M75 96 aa4.48□□□□□ -1.69
ITGB5-211ENST00000608107 Q5VV11 94 aa4.48□□□□□ -1.69
ITGB5-211ENST00000608107 A0A1B0GU33 70 aa4.46□□□□□ -1.7
ITGB5-211ENST00000608107 SPATA8Q6RVD6 105 aa4.45□□□□□ -1.7
ITGB5-211ENST00000608107 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
ITGB5-211ENST00000608107 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
ITGB5-211ENST00000608107 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
ITGB5-211ENST00000608107 Q1T7F1 81 aa4.41□□□□□ -1.7
ITGB5-211ENST00000608107 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
ITGB5-211ENST00000608107 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
ITGB5-211ENST00000608107 A0A0D9SG42 100 aa4.38□□□□□ -1.71
ITGB5-211ENST00000608107 PSPHP1O15172 72 aa4.38□□□□□ -1.71
ITGB5-211ENST00000608107 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
ITGB5-211ENST00000608107 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
ITGB5-211ENST00000608107 V9GYY9 64 aa4.37□□□□□ -1.71
ITGB5-211ENST00000608107 A8MU10 97 aa4.35□□□□□ -1.71
ITGB5-211ENST00000608107 A6NN06 94 aa4.32□□□□□ -1.72
ITGB5-211ENST00000608107 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
ITGB5-211ENST00000608107 UQCR11O14957 56 aa4.3□□□□□ -1.72
ITGB5-211ENST00000608107 KRTAP12-1P59990 96 aa4.3□□□□□ -1.72
ITGB5-211ENST00000608107 MT1XP80297 61 aa4.3□□□□□ -1.72
ITGB5-211ENST00000608107 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.29□□□□□ -1.72
ITGB5-211ENST00000608107 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
ITGB5-211ENST00000608107 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
ITGB5-211ENST00000608107 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
ITGB5-211ENST00000608107 MIR22HGQ0VDD5 57 aa4.25□□□□□ -1.73
ITGB5-211ENST00000608107 A6NED7 52 aa4.22□□□□□ -1.73
ITGB5-211ENST00000608107 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
ITGB5-211ENST00000608107 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
ITGB5-211ENST00000608107 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
ITGB5-211ENST00000608107 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
ITGB5-211ENST00000608107 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
ITGB5-211ENST00000608107 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
ITGB5-211ENST00000608107 K7ERS5 55 aa4.06□□□□□ -1.76
ITGB5-211ENST00000608107 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
ITGB5-211ENST00000608107 KRTAP4-8A0A0G2JLE6 195 aa4.05□□□□□ -1.76
ITGB5-211ENST00000608107 KRTAP4-8Q9BYQ9 185 aa4.05□□□□□ -1.76
ITGB5-211ENST00000608107 KMT2DO14686 5537 aa3.99□□□□□ -1.77
ITGB5-211ENST00000608107 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
ITGB5-211ENST00000608107 TNP1P09430 55 aa3.97□□□□□ -1.77
ITGB5-211ENST00000608107 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
ITGB5-211ENST00000608107 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
ITGB5-211ENST00000608107 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
ITGB5-211ENST00000608107 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
ITGB5-211ENST00000608107 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
ITGB5-211ENST00000608107 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
ITGB5-211ENST00000608107 ROMO1P60602 79 aa3.88□□□□□ -1.79
ITGB5-211ENST00000608107 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
ITGB5-211ENST00000608107 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
ITGB5-211ENST00000608107 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
ITGB5-211ENST00000608107 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
ITGB5-211ENST00000608107 MT1EP04732 61 aa3.78□□□□□ -1.8
ITGB5-211ENST00000608107 SPRR2EP22531 72 aa3.77□□□□□ -1.81
ITGB5-211ENST00000608107 SPRR2BP35325 72 aa3.77□□□□□ -1.81
ITGB5-211ENST00000608107 SPRR2AP35326 72 aa3.77□□□□□ -1.81
ITGB5-211ENST00000608107 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
ITGB5-211ENST00000608107 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
ITGB5-211ENST00000608107 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
ITGB5-211ENST00000608107 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
ITGB5-211ENST00000608107 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
ITGB5-211ENST00000608107 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 1080 ms