RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
CTSA-213ENST00000606782 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
CTSA-213ENST00000606782 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
CTSA-213ENST00000606782 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
CTSA-213ENST00000606782 KLKP1Q107X0 134 aa6.42□□□□□ -1.38
CTSA-213ENST00000606782 SERP2Q8N6R1 65 aa6.4□□□□□ -1.38
CTSA-213ENST00000606782 KRTAP19-6Q3LI70 58 aa6.34□□□□□ -1.39
CTSA-213ENST00000606782 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
CTSA-213ENST00000606782 COX7CP15954 63 aa6.3□□□□□ -1.4
CTSA-213ENST00000606782 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
CTSA-213ENST00000606782 SNURFQ9Y675 71 aa6.3□□□□□ -1.4
CTSA-213ENST00000606782 A8MUN3 132 aa6.29□□□□□ -1.4
CTSA-213ENST00000606782 SYNE2Q8WXH0 6885 aaKnown RBP6.28□□□□□ -1.4
CTSA-213ENST00000606782 S4R3F8 94 aa6.26□□□□□ -1.41
CTSA-213ENST00000606782 LCA10Q71F78 164 aa6.24□□□□□ -1.41
CTSA-213ENST00000606782 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
CTSA-213ENST00000606782 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
CTSA-213ENST00000606782 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
CTSA-213ENST00000606782 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
CTSA-213ENST00000606782 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
CTSA-213ENST00000606782 ACYP2P14621 99 aa6.17□□□□□ -1.42
CTSA-213ENST00000606782 NDUFC1O43677 76 aa6.16□□□□□ -1.42
CTSA-213ENST00000606782 CYSTM1Q9H1C7 97 aa6.15□□□□□ -1.42
CTSA-213ENST00000606782 CCDC179H3BU77 68 aa6.13□□□□□ -1.43
CTSA-213ENST00000606782 H7BZZ5 65 aa6.13□□□□□ -1.43
CTSA-213ENST00000606782 KRTAP6-3Q3LI67 103 aa6.09□□□□□ -1.43
CTSA-213ENST00000606782 H0YAA0 97 aa6.03□□□□□ -1.44
CTSA-213ENST00000606782 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
CTSA-213ENST00000606782 MT1BP07438 61 aa6.02□□□□□ -1.45
CTSA-213ENST00000606782 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
CTSA-213ENST00000606782 CHKB-CPT1BH3BT56 60 aa5.99□□□□□ -1.45
CTSA-213ENST00000606782 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
CTSA-213ENST00000606782 Q5VV11 94 aa5.97□□□□□ -1.45
CTSA-213ENST00000606782 COA5Q86WW8 74 aa5.97□□□□□ -1.45
CTSA-213ENST00000606782 A6NN06 94 aa5.95□□□□□ -1.46
CTSA-213ENST00000606782 PCP4P48539 62 aa5.94□□□□□ -1.46
CTSA-213ENST00000606782 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
CTSA-213ENST00000606782 NEBP20929 6669 aa5.93□□□□□ -1.46
CTSA-213ENST00000606782 ATP5EP56381 51 aaPredicted RBP5.92□□□□□ -1.46
CTSA-213ENST00000606782 KRTAP10-5P60370 271 aa5.91□□□□□ -1.46
CTSA-213ENST00000606782 KRTAP3-2Q9BYR7 98 aa5.91□□□□□ -1.46
CTSA-213ENST00000606782 TMEM258P61165 79 aa5.9□□□□□ -1.46
CTSA-213ENST00000606782 CRIPTQ9P021 101 aa5.9□□□□□ -1.46
CTSA-213ENST00000606782 P0C880 135 aa5.87□□□□□ -1.47
CTSA-213ENST00000606782 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
CTSA-213ENST00000606782 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
CTSA-213ENST00000606782 R4GN34 69 aa5.74□□□□□ -1.49
CTSA-213ENST00000606782 SEC61GP60059 68 aa5.73□□□□□ -1.49
CTSA-213ENST00000606782 SERP1Q9Y6X1 66 aa5.73□□□□□ -1.49
CTSA-213ENST00000606782 M0QZ58 72 aa5.71□□□□□ -1.5
CTSA-213ENST00000606782 KMT2DO14686 5537 aa5.67□□□□□ -1.5
CTSA-213ENST00000606782 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
CTSA-213ENST00000606782 A0A1B0GU69 56 aa5.65□□□□□ -1.5
CTSA-213ENST00000606782 KRTAP20-1Q3LI63 56 aa5.65□□□□□ -1.5
CTSA-213ENST00000606782 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
CTSA-213ENST00000606782 A0A1B0GU33 70 aa5.62□□□□□ -1.51
CTSA-213ENST00000606782 MT1XP80297 61 aa5.61□□□□□ -1.51
CTSA-213ENST00000606782 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
CTSA-213ENST00000606782 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
CTSA-213ENST00000606782 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
CTSA-213ENST00000606782 LINC01554Q52M75 96 aa5.6□□□□□ -1.51
CTSA-213ENST00000606782 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
CTSA-213ENST00000606782 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
CTSA-213ENST00000606782 SMIM26A0A096LP01 95 aa5.54□□□□□ -1.52
CTSA-213ENST00000606782 Q1T7F1 81 aa5.54□□□□□ -1.52
CTSA-213ENST00000606782 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
CTSA-213ENST00000606782 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
CTSA-213ENST00000606782 V9GYY9 64 aa5.52□□□□□ -1.53
CTSA-213ENST00000606782 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
CTSA-213ENST00000606782 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
CTSA-213ENST00000606782 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
CTSA-213ENST00000606782 SPRR2EP22531 72 aa5.46□□□□□ -1.54
CTSA-213ENST00000606782 SPRR2BP35325 72 aa5.46□□□□□ -1.54
CTSA-213ENST00000606782 SPRR2AP35326 72 aa5.46□□□□□ -1.54
CTSA-213ENST00000606782 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
CTSA-213ENST00000606782 A0A0D9SG42 100 aa5.45□□□□□ -1.54
CTSA-213ENST00000606782 UQCR11O14957 56 aa5.43□□□□□ -1.54
CTSA-213ENST00000606782 PSPHP1O15172 72 aa5.42□□□□□ -1.54
CTSA-213ENST00000606782 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
CTSA-213ENST00000606782 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
CTSA-213ENST00000606782 A8MU10 97 aa5.4□□□□□ -1.54
CTSA-213ENST00000606782 KRTAP12-1P59990 96 aa5.4□□□□□ -1.54
CTSA-213ENST00000606782 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
CTSA-213ENST00000606782 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
CTSA-213ENST00000606782 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
CTSA-213ENST00000606782 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
CTSA-213ENST00000606782 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
CTSA-213ENST00000606782 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
CTSA-213ENST00000606782 MIR22HGQ0VDD5 57 aa5.32□□□□□ -1.56
CTSA-213ENST00000606782 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
CTSA-213ENST00000606782 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
CTSA-213ENST00000606782 SPRR2DP22532 72 aa5.28□□□□□ -1.56
CTSA-213ENST00000606782 A6NED7 52 aa5.24□□□□□ -1.57
CTSA-213ENST00000606782 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
CTSA-213ENST00000606782 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.59
CTSA-213ENST00000606782 K7ERS5 55 aa5.13□□□□□ -1.59
CTSA-213ENST00000606782 CDC42SE1Q9NRR8 79 aa5.12□□□□□ -1.59
CTSA-213ENST00000606782 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
CTSA-213ENST00000606782 TNP1P09430 55 aa5.02□□□□□ -1.61
CTSA-213ENST00000606782 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms