RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 CRCT1Q9UGL9 99 aa10.76□□□□□ -0.69
SNX5-217ENST00000606557 FSIP2Q5CZC0 6907 aa10.73□□□□□ -0.69
SNX5-217ENST00000606557 LCE2BO14633 110 aa10.71□□□□□ -0.69
SNX5-217ENST00000606557 DMAC1Q96GE9 116 aa10.66□□□□□ -0.7
SNX5-217ENST00000606557 NDUFC1O43677 76 aa10.65□□□□□ -0.7
SNX5-217ENST00000606557 USH2AO75445 5202 aa10.64□□□□□ -0.71
SNX5-217ENST00000606557 SERP2Q8N6R1 65 aa10.63□□□□□ -0.71
SNX5-217ENST00000606557 SNURFQ9Y675 71 aa10.6□□□□□ -0.71
SNX5-217ENST00000606557 C20orf197Q8N268 126 aa10.54□□□□□ -0.72
SNX5-217ENST00000606557 H0YAA0 97 aa10.48□□□□□ -0.73
SNX5-217ENST00000606557 KRTAP19-1Q8IUB9 90 aa10.47□□□□□ -0.73
SNX5-217ENST00000606557 SSPOA2VEC9 5147 aa10.47□□□□□ -0.73
SNX5-217ENST00000606557 ACYP2P14621 99 aa10.44□□□□□ -0.74
SNX5-217ENST00000606557 COX7CP15954 63 aa10.42□□□□□ -0.74
SNX5-217ENST00000606557 SPANXA2-OT1Q8N9U9 137 aa10.41□□□□□ -0.74
SNX5-217ENST00000606557 SPRR2GQ9BYE4 73 aa10.4□□□□□ -0.74
SNX5-217ENST00000606557 ADM2Q7Z4H4 148 aa10.36□□□□□ -0.75
SNX5-217ENST00000606557 CRIPTQ9P021 101 aa10.35□□□□□ -0.75
SNX5-217ENST00000606557 KRTAP19-8Q3LI54 63 aa10.27□□□□□ -0.77
SNX5-217ENST00000606557 KRTAP19-6Q3LI70 58 aa10.27□□□□□ -0.77
SNX5-217ENST00000606557 ANAPC13Q9BS18 74 aa10.25□□□□□ -0.77
SNX5-217ENST00000606557 CHKB-CPT1BH3BT56 60 aa10.24□□□□□ -0.77
SNX5-217ENST00000606557 SPTSSBQ8NFR3 76 aa10.24□□□□□ -0.77
SNX5-217ENST00000606557 MT1BP07438 61 aa10.22□□□□□ -0.77
SNX5-217ENST00000606557 CYSTM1Q9H1C7 97 aa10.22□□□□□ -0.77
SNX5-217ENST00000606557 Q5VV11 94 aa10.21□□□□□ -0.77
SNX5-217ENST00000606557 P0C880 135 aa10.2□□□□□ -0.78
SNX5-217ENST00000606557 H7BZZ5 65 aa10.19□□□□□ -0.78
SNX5-217ENST00000606557 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
SNX5-217ENST00000606557 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
SNX5-217ENST00000606557 COA5Q86WW8 74 aa10.09□□□□□ -0.79
SNX5-217ENST00000606557 R4GN34 69 aa10.06□□□□□ -0.8
SNX5-217ENST00000606557 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
SNX5-217ENST00000606557 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.01□□□□□ -0.81
SNX5-217ENST00000606557 M0QZ58 72 aa10.01□□□□□ -0.81
SNX5-217ENST00000606557 A6NN06 94 aa9.92□□□□□ -0.82
SNX5-217ENST00000606557 KRTAP10-5P60370 271 aa9.9□□□□□ -0.82
SNX5-217ENST00000606557 LINC01554Q52M75 96 aa9.83□□□□□ -0.84
SNX5-217ENST00000606557 PLAC4Q8WY50 150 aa9.81□□□□□ -0.84
SNX5-217ENST00000606557 ATP5EP56381 51 aaPredicted RBP9.8□□□□□ -0.84
SNX5-217ENST00000606557 KRTAP9-7A8MTY7 169 aa9.76□□□□□ -0.85
SNX5-217ENST00000606557 MACF1Q9UPN3 7388 aaKnown RBP9.75□□□□□ -0.85
SNX5-217ENST00000606557 SEC61GP60059 68 aa9.72□□□□□ -0.85
SNX5-217ENST00000606557 KRTAP13-4Q3LI77 160 aa9.7□□□□□ -0.86
SNX5-217ENST00000606557 SERP1Q9Y6X1 66 aa9.7□□□□□ -0.86
SNX5-217ENST00000606557 TMEM258P61165 79 aa9.69□□□□□ -0.86
SNX5-217ENST00000606557 MT1XP80297 61 aa9.69□□□□□ -0.86
SNX5-217ENST00000606557 PRO2289Q9P1D8 64 aa9.65□□□□□ -0.86
SNX5-217ENST00000606557 SYNE2Q8WXH0 6885 aaKnown RBP9.54□□□□□ -0.88
SNX5-217ENST00000606557 A0A1B0GU33 70 aa9.54□□□□□ -0.88
SNX5-217ENST00000606557 A0A1B0GU69 56 aa9.54□□□□□ -0.88
SNX5-217ENST00000606557 KRTAP6-3Q3LI67 103 aa9.48□□□□□ -0.89
SNX5-217ENST00000606557 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
SNX5-217ENST00000606557 A0A0D9SG42 100 aa9.41□□□□□ -0.9
SNX5-217ENST00000606557 LINC01558Q9Y6Z2 57 aa9.4□□□□□ -0.9
SNX5-217ENST00000606557 KRTAP12-2P59991 146 aa9.37□□□□□ -0.91
SNX5-217ENST00000606557 PRR15LQ9BU68 103 aa9.37□□□□□ -0.91
SNX5-217ENST00000606557 CAMK2N1Q7Z7J9 78 aa9.3□□□□□ -0.92
SNX5-217ENST00000606557 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
SNX5-217ENST00000606557 KRTAP12-1P59990 96 aa9.26□□□□□ -0.93
SNX5-217ENST00000606557 KRTAP10-7P60409 375 aaPredicted RBP9.25□□□□□ -0.93
SNX5-217ENST00000606557 KRTAP5-9P26371 169 aa9.24□□□□□ -0.93
SNX5-217ENST00000606557 SPINT4Q6UDR6 99 aa9.24□□□□□ -0.93
SNX5-217ENST00000606557 KMT2DO14686 5537 aa9.24□□□□□ -0.93
SNX5-217ENST00000606557 A8MU10 97 aa9.22□□□□□ -0.93
SNX5-217ENST00000606557 PCP4P48539 62 aa9.2□□□□□ -0.94
SNX5-217ENST00000606557 KRTAP10-12P60413 245 aa9.2□□□□□ -0.94
SNX5-217ENST00000606557 KRTAP4-8A0A0G2JLE6 195 aa9.13□□□□□ -0.95
SNX5-217ENST00000606557 KRTAP8-1Q8IUC2 63 aa9.13□□□□□ -0.95
SNX5-217ENST00000606557 KRTAP4-8Q9BYQ9 185 aa9.13□□□□□ -0.95
SNX5-217ENST00000606557 UQCR11O14957 56 aa9.08□□□□□ -0.96
SNX5-217ENST00000606557 V9GYY9 64 aa9.07□□□□□ -0.96
SNX5-217ENST00000606557 MUC12Q9UKN1 5478 aa9.07□□□□□ -0.96
SNX5-217ENST00000606557 Q1T7F1 81 aa9.05□□□□□ -0.96
SNX5-217ENST00000606557 SPRR2FQ96RM1 72 aa9.04□□□□□ -0.96
SNX5-217ENST00000606557 PSPHP1O15172 72 aa8.97□□□□□ -0.97
SNX5-217ENST00000606557 NEBP20929 6669 aa8.95□□□□□ -0.98
SNX5-217ENST00000606557 RPS28P62857 69 aaKnown RBP8.91□□□□□ -0.98
SNX5-217ENST00000606557 MIR22HGQ0VDD5 57 aa8.91□□□□□ -0.98
SNX5-217ENST00000606557 MDN1Q9NU22 5596 aa8.88□□□□□ -0.99
SNX5-217ENST00000606557 C10orf95Q9H7T3 257 aa8.82□□□□□ -1
SNX5-217ENST00000606557 SPRR2EP22531 72 aa8.81□□□□□ -1
SNX5-217ENST00000606557 SPRR2BP35325 72 aa8.81□□□□□ -1
SNX5-217ENST00000606557 SPRR2AP35326 72 aa8.81□□□□□ -1
SNX5-217ENST00000606557 LCE1AQ5T7P2 110 aa8.76□□□□□ -1.01
SNX5-217ENST00000606557 TNP1P09430 55 aa8.69□□□□□ -1.02
SNX5-217ENST00000606557 A6NED7 52 aa8.68□□□□□ -1.02
SNX5-217ENST00000606557 KRTAP19-7Q3SYF9 63 aa8.65□□□□□ -1.02
SNX5-217ENST00000606557 K7ERS5 55 aa8.64□□□□□ -1.03
SNX5-217ENST00000606557 KRTAP20-1Q3LI63 56 aa8.59□□□□□ -1.03
SNX5-217ENST00000606557 MT1EP04732 61 aa8.56□□□□□ -1.04
SNX5-217ENST00000606557 LCE3AQ5TA76 89 aa8.54□□□□□ -1.04
SNX5-217ENST00000606557 KRTAP19-5Q3LI72 72 aa8.53□□□□□ -1.04
SNX5-217ENST00000606557 SPRR2DP22532 72 aa8.51□□□□□ -1.05
SNX5-217ENST00000606557 KRTAP2-3P0C7H8 128 aa8.46□□□□□ -1.06
SNX5-217ENST00000606557 KRTAP2-4Q9BYR9 128 aa8.46□□□□□ -1.06
SNX5-217ENST00000606557 KRTAP25-1Q3LHN0 102 aa8.41□□□□□ -1.06
SNX5-217ENST00000606557 KRTAP19-3Q7Z4W3 81 aa8.39□□□□□ -1.07
SNX5-217ENST00000606557 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
SNX5-217ENST00000606557 LCE5AQ5TCM9 118 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms