RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 MP68P56378 58 aa6.75□□□□□ -1.33
TUBE1-208ENST00000604743 H0Y9P7 68 aa6.74□□□□□ -1.33
TUBE1-208ENST00000604743 OCR1Q9BZK8 76 aa6.74□□□□□ -1.33
TUBE1-208ENST00000604743 LOC101927531A0A1B0GV80 90 aa6.73□□□□□ -1.33
TUBE1-208ENST00000604743 LCA10Q71F78 164 aa6.72□□□□□ -1.33
TUBE1-208ENST00000604743 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
TUBE1-208ENST00000604743 TRAV7A0A075B6U4 112 aa6.69□□□□□ -1.34
TUBE1-208ENST00000604743 H3BPC8 53 aa6.69□□□□□ -1.34
TUBE1-208ENST00000604743 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
TUBE1-208ENST00000604743 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
TUBE1-208ENST00000604743 LINC00208Q96KT6 92 aa6.65□□□□□ -1.34
TUBE1-208ENST00000604743 SERP2Q8N6R1 65 aa6.61□□□□□ -1.35
TUBE1-208ENST00000604743 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
TUBE1-208ENST00000604743 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
TUBE1-208ENST00000604743 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
TUBE1-208ENST00000604743 ANAPC13Q9BS18 74 aa6.52□□□□□ -1.37
TUBE1-208ENST00000604743 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
TUBE1-208ENST00000604743 NDUFC1O43677 76 aa6.51□□□□□ -1.37
TUBE1-208ENST00000604743 COX7CP15954 63 aa6.51□□□□□ -1.37
TUBE1-208ENST00000604743 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
TUBE1-208ENST00000604743 A8MUN3 132 aa6.49□□□□□ -1.37
TUBE1-208ENST00000604743 KRTAP4-12Q9BQ66 201 aa6.48□□□□□ -1.37
TUBE1-208ENST00000604743 SPRR2GQ9BYE4 73 aa6.46□□□□□ -1.38
TUBE1-208ENST00000604743 SNURFQ9Y675 71 aa6.46□□□□□ -1.38
TUBE1-208ENST00000604743 Q5VV11 94 aa6.45□□□□□ -1.38
TUBE1-208ENST00000604743 SYNE2Q8WXH0 6885 aaKnown RBP6.45□□□□□ -1.38
TUBE1-208ENST00000604743 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
TUBE1-208ENST00000604743 MT1BP07438 61 aa6.43□□□□□ -1.38
TUBE1-208ENST00000604743 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
TUBE1-208ENST00000604743 KRTAP9-9Q9BYP9 154 aa6.4□□□□□ -1.38
TUBE1-208ENST00000604743 KRTAP9-4Q9BYQ2 154 aa6.4□□□□□ -1.38
TUBE1-208ENST00000604743 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
TUBE1-208ENST00000604743 H0YAA0 97 aa6.38□□□□□ -1.39
TUBE1-208ENST00000604743 H3BS24 57 aa6.38□□□□□ -1.39
TUBE1-208ENST00000604743 ADM2Q7Z4H4 148 aa6.38□□□□□ -1.39
TUBE1-208ENST00000604743 SPANXA2-OT1Q8N9U9 137 aa6.38□□□□□ -1.39
TUBE1-208ENST00000604743 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
TUBE1-208ENST00000604743 A6NN06 94 aa6.35□□□□□ -1.39
TUBE1-208ENST00000604743 ACYP2P14621 99 aa6.35□□□□□ -1.39
TUBE1-208ENST00000604743 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
TUBE1-208ENST00000604743 SVIPQ8NHG7 77 aa6.3□□□□□ -1.4
TUBE1-208ENST00000604743 CCDC179H3BU77 68 aa6.28□□□□□ -1.4
TUBE1-208ENST00000604743 CHKB-CPT1BH3BT56 60 aa6.27□□□□□ -1.41
TUBE1-208ENST00000604743 H7BZZ5 65 aa6.27□□□□□ -1.41
TUBE1-208ENST00000604743 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
TUBE1-208ENST00000604743 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
TUBE1-208ENST00000604743 P0C880 135 aa6.24□□□□□ -1.41
TUBE1-208ENST00000604743 ATP5EP56381 51 aaPredicted RBP6.23□□□□□ -1.41
TUBE1-208ENST00000604743 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
TUBE1-208ENST00000604743 R4GN34 69 aa6.21□□□□□ -1.42
TUBE1-208ENST00000604743 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
TUBE1-208ENST00000604743 M0QZ58 72 aa6.18□□□□□ -1.42
TUBE1-208ENST00000604743 TMEM258P61165 79 aa6.17□□□□□ -1.42
TUBE1-208ENST00000604743 COA5Q86WW8 74 aa6.15□□□□□ -1.42
TUBE1-208ENST00000604743 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
TUBE1-208ENST00000604743 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
TUBE1-208ENST00000604743 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
TUBE1-208ENST00000604743 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
TUBE1-208ENST00000604743 PCP4P48539 62 aa6.1□□□□□ -1.43
TUBE1-208ENST00000604743 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
TUBE1-208ENST00000604743 MT1XP80297 61 aa6.05□□□□□ -1.44
TUBE1-208ENST00000604743 SEC61GP60059 68 aa6.01□□□□□ -1.45
TUBE1-208ENST00000604743 NEBP20929 6669 aa6.01□□□□□ -1.45
TUBE1-208ENST00000604743 MUC12Q9UKN1 5478 aa6□□□□□ -1.45
TUBE1-208ENST00000604743 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
TUBE1-208ENST00000604743 KMT2DO14686 5537 aa5.96□□□□□ -1.45
TUBE1-208ENST00000604743 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
TUBE1-208ENST00000604743 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
TUBE1-208ENST00000604743 PRR15LQ9BU68 103 aa5.89□□□□□ -1.47
TUBE1-208ENST00000604743 A0A1B0GU69 56 aa5.88□□□□□ -1.47
TUBE1-208ENST00000604743 KRTAP13-4Q3LI77 160 aa5.86□□□□□ -1.47
TUBE1-208ENST00000604743 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
TUBE1-208ENST00000604743 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
TUBE1-208ENST00000604743 MDN1Q9NU22 5596 aa5.85□□□□□ -1.47
TUBE1-208ENST00000604743 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
TUBE1-208ENST00000604743 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.47
TUBE1-208ENST00000604743 V9GYY9 64 aa5.82□□□□□ -1.48
TUBE1-208ENST00000604743 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
TUBE1-208ENST00000604743 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
TUBE1-208ENST00000604743 RPS28P62857 69 aaKnown RBP5.79□□□□□ -1.48
TUBE1-208ENST00000604743 A0A1B0GU33 70 aa5.78□□□□□ -1.48
TUBE1-208ENST00000604743 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
TUBE1-208ENST00000604743 A0A0D9SG42 100 aa5.74□□□□□ -1.49
TUBE1-208ENST00000604743 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
TUBE1-208ENST00000604743 SPRR2EP22531 72 aa5.73□□□□□ -1.49
TUBE1-208ENST00000604743 SPRR2BP35325 72 aa5.73□□□□□ -1.49
TUBE1-208ENST00000604743 SPRR2AP35326 72 aa5.73□□□□□ -1.49
TUBE1-208ENST00000604743 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
TUBE1-208ENST00000604743 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
TUBE1-208ENST00000604743 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
TUBE1-208ENST00000604743 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
TUBE1-208ENST00000604743 Q1T7F1 81 aa5.71□□□□□ -1.5
TUBE1-208ENST00000604743 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
TUBE1-208ENST00000604743 UQCR11O14957 56 aa5.65□□□□□ -1.5
TUBE1-208ENST00000604743 SPINT4Q6UDR6 99 aa5.65□□□□□ -1.5
TUBE1-208ENST00000604743 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
TUBE1-208ENST00000604743 PSPHP1O15172 72 aa5.61□□□□□ -1.51
TUBE1-208ENST00000604743 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
TUBE1-208ENST00000604743 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
TUBE1-208ENST00000604743 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms