RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 SPAG11BQ08648 103 aa1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 DEFB135Q30KP9 77 aa1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 SPAG11AQ6PDA7 123 aa1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 Q8IZM0 81 aa1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 RPL39LQ96EH5 51 aaKnown RBP1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 NOP10Q9NPE3 64 aaKnown RBP1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 KMT2CQ8NEZ4 4911 aaKnown RBP1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 RYR2Q92736 4967 aa1.18□□□□□ -2.22
AC004542.1-201ENST00000602955 HECTD4Q9Y4D8 3996 aa1.18□□□□□ -2.22
AC004542.1-201ENST00000602955 DNAH8Q96JB1 4490 aa1.18□□□□□ -2.22
AC004542.1-201ENST00000602955 A0A096LPF7 62 aa1.18□□□□□ -2.22
AC004542.1-201ENST00000602955 DNAH5Q8TE73 4624 aa1.18□□□□□ -2.22
AC004542.1-201ENST00000602955 LYSTQ99698 3801 aa1.18□□□□□ -2.22
AC004542.1-201ENST00000602955 DYNC1H1Q14204 4646 aaKnown RBP1.17□□□□□ -2.22
AC004542.1-201ENST00000602955 LRP1BQ9NZR2 4599 aa1.17□□□□□ -2.22
AC004542.1-201ENST00000602955 KMT2AQ03164 3969 aa1.17□□□□□ -2.22
AC004542.1-201ENST00000602955 LINC00959A0A1B0GUT2 108 aa1.17□□□□□ -2.22
AC004542.1-201ENST00000602955 H0Y9P7 68 aa1.17□□□□□ -2.22
AC004542.1-201ENST00000602955 LY6G6CO95867 125 aa1.17□□□□□ -2.22
AC004542.1-201ENST00000602955 RPL39P62891 51 aaKnown RBP1.17□□□□□ -2.22
AC004542.1-201ENST00000602955 NREPQ16612 68 aa1.17□□□□□ -2.22
AC004542.1-201ENST00000602955 DEFB131BA0A096LNP1 70 aa1.16□□□□□ -2.22
AC004542.1-201ENST00000602955 CCL18P55774 89 aa1.16□□□□□ -2.22
AC004542.1-201ENST00000602955 CDKN2A-AS1Q9UH64 79 aa1.16□□□□□ -2.22
AC004542.1-201ENST00000602955 APLNQ9ULZ1 77 aa1.16□□□□□ -2.22
AC004542.1-201ENST00000602955 PKHD1P08F94 4074 aa1.16□□□□□ -2.22
AC004542.1-201ENST00000602955 FRAS1Q86XX4 4008 aa1.15□□□□□ -2.22
AC004542.1-201ENST00000602955 LCE6AA0A183 80 aa1.15□□□□□ -2.23
AC004542.1-201ENST00000602955 DEFB130BP0DP73 79 aa1.15□□□□□ -2.23
AC004542.1-201ENST00000602955 DEFB130AP0DP74 79 aa1.15□□□□□ -2.23
AC004542.1-201ENST00000602955 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
AC004542.1-201ENST00000602955 ENHOQ6UWT2 76 aa1.15□□□□□ -2.23
AC004542.1-201ENST00000602955 LINC01558Q9Y6Z2 57 aa1.15□□□□□ -2.23
AC004542.1-201ENST00000602955 APOBP04114 4563 aaKnown RBP1.15□□□□□ -2.23
AC004542.1-201ENST00000602955 ETDCA0A1B0GVM5 59 aa1.14□□□□□ -2.23
AC004542.1-201ENST00000602955 ACYP2P14621 99 aa1.14□□□□□ -2.23
AC004542.1-201ENST00000602955 HTN1P15515 57 aa1.14□□□□□ -2.23
AC004542.1-201ENST00000602955 SPRR1AP35321 89 aa1.14□□□□□ -2.23
AC004542.1-201ENST00000602955 WFDC10BQ8IUB3 73 aa1.14□□□□□ -2.23
AC004542.1-201ENST00000602955 LINC00308Q8TCZ7 52 aa1.14□□□□□ -2.23
AC004542.1-201ENST00000602955 RYR1P21817 5038 aa1.13□□□□□ -2.23
AC004542.1-201ENST00000602955 COX6A2Q02221 97 aa1.13□□□□□ -2.23
AC004542.1-201ENST00000602955 PLAC4Q8WY50 150 aa1.13□□□□□ -2.23
AC004542.1-201ENST00000602955 KCNQ1DNQ9H478 68 aa1.13□□□□□ -2.23
AC004542.1-201ENST00000602955 TP53AIP1Q9HCN2 124 aa1.13□□□□□ -2.23
AC004542.1-201ENST00000602955 C6orf48Q9UBA6 75 aa1.13□□□□□ -2.23
AC004542.1-201ENST00000602955 RYR3Q15413 4870 aa1.13□□□□□ -2.23
AC004542.1-201ENST00000602955 PKD1P98161 4303 aa1.13□□□□□ -2.23
AC004542.1-201ENST00000602955 FAT1Q14517 4588 aa1.12□□□□□ -2.23
AC004542.1-201ENST00000602955 PKHD1L1Q86WI1 4243 aa1.12□□□□□ -2.23
AC004542.1-201ENST00000602955 VPS13BQ7Z7G8 4022 aa1.12□□□□□ -2.23
AC004542.1-201ENST00000602955 DEFB4AO15263 64 aa1.12□□□□□ -2.23
AC004542.1-201ENST00000602955 HAMPP81172 84 aa1.12□□□□□ -2.23
AC004542.1-201ENST00000602955 COX6B2Q6YFQ2 88 aa1.12□□□□□ -2.23
AC004542.1-201ENST00000602955 IGLV5-48A0A075B6I7 105 aa1.11□□□□□ -2.23
AC004542.1-201ENST00000602955 SPRR1BP22528 89 aa1.11□□□□□ -2.23
AC004542.1-201ENST00000602955 SPATA8Q6RVD6 105 aa1.11□□□□□ -2.23
AC004542.1-201ENST00000602955 PLAC8Q9NZF1 115 aa1.11□□□□□ -2.23
AC004542.1-201ENST00000602955 HYDINQ4G0P3 5121 aa1.11□□□□□ -2.23
AC004542.1-201ENST00000602955 HSPG2P98160 4391 aa1.1□□□□□ -2.23
AC004542.1-201ENST00000602955 A0A087WVE0 104 aa1.1□□□□□ -2.23
AC004542.1-201ENST00000602955 COX7BP24311 80 aa1.1□□□□□ -2.23
AC004542.1-201ENST00000602955 Q6ZRX8 168 aa1.1□□□□□ -2.23
AC004542.1-201ENST00000602955 HERC2O95714 4834 aa1.1□□□□□ -2.23
AC004542.1-201ENST00000602955 BIRC6Q9NR09 4857 aa1.1□□□□□ -2.23
AC004542.1-201ENST00000602955 KIAA1109Q2LD37 5005 aa1.09□□□□□ -2.23
AC004542.1-201ENST00000602955 A0A1B0GU69 56 aa1.09□□□□□ -2.23
AC004542.1-201ENST00000602955 HTN3P15516 51 aa1.09□□□□□ -2.23
AC004542.1-201ENST00000602955 LINC00158P58513 81 aa1.09□□□□□ -2.23
AC004542.1-201ENST00000602955 RPS29P62273 56 aaKnown RBP1.09□□□□□ -2.23
AC004542.1-201ENST00000602955 SMIM11BQ8TCY0 68 aa1.09□□□□□ -2.23
AC004542.1-201ENST00000602955 LINC00472Q9H8W2 130 aa1.09□□□□□ -2.23
AC004542.1-201ENST00000602955 A0A096LNI7 61 aa1.08□□□□□ -2.24
AC004542.1-201ENST00000602955 CLPSL2Q6UWE3 100 aa1.08□□□□□ -2.24
AC004542.1-201ENST00000602955 UBE2DNLQ8IWF7 75 aa1.08□□□□□ -2.24
AC004542.1-201ENST00000602955 SPRR4Q96PI1 79 aa1.08□□□□□ -2.24
AC004542.1-201ENST00000602955 TOMM7Q9P0U1 55 aa1.08□□□□□ -2.24
AC004542.1-201ENST00000602955 MYCBP2O75592 4640 aa1.08□□□□□ -2.24
AC004542.1-201ENST00000602955 SRRM2Q9UQ35 2752 aaKnown RBP1.08□□□□□ -2.24
AC004542.1-201ENST00000602955 DEFB104AQ8WTQ1 72 aa1.07□□□□□ -2.24
AC004542.1-201ENST00000602955 TNXBP22105 4242 aa1.07□□□□□ -2.24
AC004542.1-201ENST00000602955 EPPK1P58107 5090 aaKnown RBP1.07□□□□□ -2.24
AC004542.1-201ENST00000602955 FAT3Q8TDW7 4589 aa1.06□□□□□ -2.24
AC004542.1-201ENST00000602955 RPL37P61927 97 aaKnown RBP1.06□□□□□ -2.24
AC004542.1-201ENST00000602955 PCLOQ9Y6V0 5065 aa1.06□□□□□ -2.24
AC004542.1-201ENST00000602955 DMBT1Q9UGM3 2413 aaPredicted RBP1.05□□□□□ -2.24
AC004542.1-201ENST00000602955 CRIPTQ9P021 101 aa1.05□□□□□ -2.24
AC004542.1-201ENST00000602955 CRCT1Q9UGL9 99 aa1.05□□□□□ -2.24
AC004542.1-201ENST00000602955 ABCA13Q86UQ4 5058 aa1.04□□□□□ -2.24
AC004542.1-201ENST00000602955 SPINK7P58062 85 aa1.04□□□□□ -2.24
AC004542.1-201ENST00000602955 SPINK6Q6UWN8 80 aa1.04□□□□□ -2.24
AC004542.1-201ENST00000602955 SSBP3-AS1Q7Z2R9 100 aa1.04□□□□□ -2.24
AC004542.1-201ENST00000602955 LRP1Q07954 4544 aaKnown RBP1.04□□□□□ -2.24
AC004542.1-201ENST00000602955 HMCN2Q8NDA2 5059 aa1.04□□□□□ -2.24
AC004542.1-201ENST00000602955 K7EQZ3 153 aa1.02□□□□□ -2.25
AC004542.1-201ENST00000602955 SPINK1P00995 79 aa1.02□□□□□ -2.25
AC004542.1-201ENST00000602955 PRLHP81277 87 aa1.02□□□□□ -2.25
AC004542.1-201ENST00000602955 A0A0D9SG42 100 aa1.01□□□□□ -2.25
AC004542.1-201ENST00000602955 HERC1Q15751 4861 aa1□□□□□ -2.25
AC004542.1-201ENST00000602955 MRPL34Q9BQ48 92 aaKnown RBP1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms