RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 LCA10Q71F78 164 aa9.1□□□□□ -0.95
SSBP4-212ENST00000601919 SPTSSBQ8NFR3 76 aa9.08□□□□□ -0.96
SSBP4-212ENST00000601919 MT1HP80294 61 aa9.05□□□□□ -0.96
SSBP4-212ENST00000601919 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
SSBP4-212ENST00000601919 M0R2T5 61 aa9.03□□□□□ -0.96
SSBP4-212ENST00000601919 SERP1Q9Y6X1 66 aa9.03□□□□□ -0.96
SSBP4-212ENST00000601919 FLGP20930 4061 aaPredicted RBP9.02□□□□□ -0.96
SSBP4-212ENST00000601919 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
SSBP4-212ENST00000601919 FAT4Q6V0I7 4981 aa9□□□□□ -0.97
SSBP4-212ENST00000601919 RPS28P62857 69 aaKnown RBP8.89□□□□□ -0.99
SSBP4-212ENST00000601919 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
SSBP4-212ENST00000601919 H0YAA0 97 aa8.8□□□□□ -1
SSBP4-212ENST00000601919 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
SSBP4-212ENST00000601919 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
SSBP4-212ENST00000601919 SEC61GP60059 68 aa8.76□□□□□ -1.01
SSBP4-212ENST00000601919 LORP23490 312 aaPredicted RBP8.72□□□□□ -1.01
SSBP4-212ENST00000601919 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
SSBP4-212ENST00000601919 V9GYY9 64 aa8.71□□□□□ -1.02
SSBP4-212ENST00000601919 LINC01558Q9Y6Z2 57 aa8.69□□□□□ -1.02
SSBP4-212ENST00000601919 A0A1B0GU69 56 aa8.67□□□□□ -1.02
SSBP4-212ENST00000601919 PRR15LQ9BU68 103 aa8.67□□□□□ -1.02
SSBP4-212ENST00000601919 KRTAP9-8Q9BYQ0 159 aa8.67□□□□□ -1.02
SSBP4-212ENST00000601919 Q1T7F1 81 aa8.64□□□□□ -1.03
SSBP4-212ENST00000601919 MT2AP02795 61 aa8.62□□□□□ -1.03
SSBP4-212ENST00000601919 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
SSBP4-212ENST00000601919 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
SSBP4-212ENST00000601919 P0C880 135 aa8.58□□□□□ -1.04
SSBP4-212ENST00000601919 MT1FP04733 61 aa8.56□□□□□ -1.04
SSBP4-212ENST00000601919 CRIPTQ9P021 101 aa8.56□□□□□ -1.04
SSBP4-212ENST00000601919 A0A1B0GU33 70 aa8.48□□□□□ -1.05
SSBP4-212ENST00000601919 PSPHP1O15172 72 aa8.47□□□□□ -1.05
SSBP4-212ENST00000601919 R4GN34 69 aa8.47□□□□□ -1.05
SSBP4-212ENST00000601919 M0QZ58 72 aa8.45□□□□□ -1.06
SSBP4-212ENST00000601919 Q5VV11 94 aa8.38□□□□□ -1.07
SSBP4-212ENST00000601919 KRTAP9-3Q9BYQ3 159 aa8.38□□□□□ -1.07
SSBP4-212ENST00000601919 UQCR11O14957 56 aa8.36□□□□□ -1.07
SSBP4-212ENST00000601919 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
SSBP4-212ENST00000601919 KRTAP19-1Q8IUB9 90 aa8.3□□□□□ -1.08
SSBP4-212ENST00000601919 KRTAP13-4Q3LI77 160 aa8.29□□□□□ -1.08
SSBP4-212ENST00000601919 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
SSBP4-212ENST00000601919 A6NED7 52 aa8.27□□□□□ -1.09
SSBP4-212ENST00000601919 LINC01554Q52M75 96 aa8.25□□□□□ -1.09
SSBP4-212ENST00000601919 MIR22HGQ0VDD5 57 aa8.23□□□□□ -1.09
SSBP4-212ENST00000601919 LCE2DQ5TA82 110 aaPredicted RBP8.23□□□□□ -1.09
SSBP4-212ENST00000601919 KRTAP19-8Q3LI54 63 aa8.18□□□□□ -1.1
SSBP4-212ENST00000601919 A0A0D9SG42 100 aa8.17□□□□□ -1.1
SSBP4-212ENST00000601919 LCE2BO14633 110 aa8.16□□□□□ -1.1
SSBP4-212ENST00000601919 A6NN06 94 aa8.15□□□□□ -1.1
SSBP4-212ENST00000601919 A8MU10 97 aa8.11□□□□□ -1.11
SSBP4-212ENST00000601919 PLAC4Q8WY50 150 aa8.09□□□□□ -1.11
SSBP4-212ENST00000601919 CDC42SE1Q9NRR8 79 aa8.07□□□□□ -1.12
SSBP4-212ENST00000601919 MT1BP07438 61 aa8.04□□□□□ -1.12
SSBP4-212ENST00000601919 SPINT4Q6UDR6 99 aa8.03□□□□□ -1.12
SSBP4-212ENST00000601919 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
SSBP4-212ENST00000601919 KRTAP9-2Q9BYQ4 174 aa8.01□□□□□ -1.13
SSBP4-212ENST00000601919 K7ERS5 55 aa8□□□□□ -1.13
SSBP4-212ENST00000601919 KRTAP12-2P59991 146 aa7.95□□□□□ -1.14
SSBP4-212ENST00000601919 BRK1Q8WUW1 75 aa7.94□□□□□ -1.14
SSBP4-212ENST00000601919 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
SSBP4-212ENST00000601919 USH2AO75445 5202 aa7.87□□□□□ -1.15
SSBP4-212ENST00000601919 PRO2289Q9P1D8 64 aa7.81□□□□□ -1.16
SSBP4-212ENST00000601919 KRTAP19-6Q3LI70 58 aa7.78□□□□□ -1.16
SSBP4-212ENST00000601919 KRTAP10-5P60370 271 aa7.74□□□□□ -1.17
SSBP4-212ENST00000601919 MT1XP80297 61 aa7.73□□□□□ -1.17
SSBP4-212ENST00000601919 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
SSBP4-212ENST00000601919 SSPOA2VEC9 5147 aa7.65□□□□□ -1.18
SSBP4-212ENST00000601919 PRO0628Q9UI54 55 aa7.64□□□□□ -1.19
SSBP4-212ENST00000601919 FSIP2Q5CZC0 6907 aa7.63□□□□□ -1.19
SSBP4-212ENST00000601919 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
SSBP4-212ENST00000601919 ROMO1P60602 79 aa7.54□□□□□ -1.2
SSBP4-212ENST00000601919 PMAIP1Q13794 54 aa7.53□□□□□ -1.2
SSBP4-212ENST00000601919 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
SSBP4-212ENST00000601919 TNP1P09430 55 aa7.49□□□□□ -1.21
SSBP4-212ENST00000601919 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
SSBP4-212ENST00000601919 FCGBPQ9Y6R7 5405 aaPredicted RBP7.39□□□□□ -1.23
SSBP4-212ENST00000601919 KRTAP10-7P60409 375 aaPredicted RBP7.38□□□□□ -1.23
SSBP4-212ENST00000601919 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
SSBP4-212ENST00000601919 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
SSBP4-212ENST00000601919 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
SSBP4-212ENST00000601919 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
SSBP4-212ENST00000601919 KRTAP4-8Q9BYQ9 185 aa7.14□□□□□ -1.27
SSBP4-212ENST00000601919 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
SSBP4-212ENST00000601919 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
SSBP4-212ENST00000601919 KTN1-AS1Q86SY8 53 aa7.12□□□□□ -1.27
SSBP4-212ENST00000601919 KRTAP8-1Q8IUC2 63 aa7.12□□□□□ -1.27
SSBP4-212ENST00000601919 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.28
SSBP4-212ENST00000601919 PRAC1Q96KF2 57 aa6.99□□□□□ -1.29
SSBP4-212ENST00000601919 KMT2DO14686 5537 aa6.97□□□□□ -1.29
SSBP4-212ENST00000601919 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
SSBP4-212ENST00000601919 KRTAP6-3Q3LI67 103 aa6.92□□□□□ -1.3
SSBP4-212ENST00000601919 KRTAP12-3P60328 96 aa6.9□□□□□ -1.3
SSBP4-212ENST00000601919 KRTAP5-9P26371 169 aa6.89□□□□□ -1.31
SSBP4-212ENST00000601919 KRTAP19-7Q3SYF9 63 aa6.89□□□□□ -1.31
SSBP4-212ENST00000601919 SPRR2FQ96RM1 72 aa6.89□□□□□ -1.31
SSBP4-212ENST00000601919 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
SSBP4-212ENST00000601919 MT1EP04732 61 aa6.81□□□□□ -1.32
SSBP4-212ENST00000601919 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
SSBP4-212ENST00000601919 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
SSBP4-212ENST00000601919 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
SSBP4-212ENST00000601919 MT1LQ93083 61 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 331.8 ms