RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 DNAH7Q8WXX0 4024 aa5.21□□□□□ -1.58
SHANK2-218ENST00000601538 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
SHANK2-218ENST00000601538 ZNF469Q96JG9 3925 aaPredicted RBP5.18□□□□□ -1.58
SHANK2-218ENST00000601538 KRTAP10-5P60370 271 aa5.16□□□□□ -1.58
SHANK2-218ENST00000601538 ANK2Q01484 3957 aa5.11□□□□□ -1.59
SHANK2-218ENST00000601538 CSMD2Q7Z408 3487 aa5.11□□□□□ -1.59
SHANK2-218ENST00000601538 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.61
SHANK2-218ENST00000601538 DNAH6Q9C0G6 4158 aa4.96□□□□□ -1.62
SHANK2-218ENST00000601538 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
SHANK2-218ENST00000601538 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
SHANK2-218ENST00000601538 DNAH2Q9P225 4427 aa4.87□□□□□ -1.63
SHANK2-218ENST00000601538 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
SHANK2-218ENST00000601538 KMT2AQ03164 3969 aa4.83□□□□□ -1.64
SHANK2-218ENST00000601538 VPS13BQ7Z7G8 4022 aa4.82□□□□□ -1.64
SHANK2-218ENST00000601538 SPRR2GQ9BYE4 73 aa4.75□□□□□ -1.65
SHANK2-218ENST00000601538 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
SHANK2-218ENST00000601538 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
SHANK2-218ENST00000601538 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
SHANK2-218ENST00000601538 DNAH1Q9P2D7 4330 aa4.68□□□□□ -1.66
SHANK2-218ENST00000601538 DNAH10Q8IVF4 4471 aa4.66□□□□□ -1.66
SHANK2-218ENST00000601538 HUWE1Q7Z6Z7 4374 aaKnown RBP4.65□□□□□ -1.66
SHANK2-218ENST00000601538 ANK3Q12955 4377 aaKnown RBP4.65□□□□□ -1.67
SHANK2-218ENST00000601538 FLGP20930 4061 aaPredicted RBP4.64□□□□□ -1.67
SHANK2-218ENST00000601538 PRKDCP78527 4128 aaKnown RBP4.61□□□□□ -1.67
SHANK2-218ENST00000601538 KRTAP4-5Q9BYR2 181 aa4.59□□□□□ -1.67
SHANK2-218ENST00000601538 FRAS1Q86XX4 4008 aa4.58□□□□□ -1.68
SHANK2-218ENST00000601538 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
SHANK2-218ENST00000601538 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
SHANK2-218ENST00000601538 MT3P25713 68 aa4.48□□□□□ -1.69
SHANK2-218ENST00000601538 PKHD1P08F94 4074 aa4.47□□□□□ -1.69
SHANK2-218ENST00000601538 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
SHANK2-218ENST00000601538 MT1HP80294 61 aa4.39□□□□□ -1.71
SHANK2-218ENST00000601538 MT2AP02795 61 aa4.36□□□□□ -1.71
SHANK2-218ENST00000601538 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
SHANK2-218ENST00000601538 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
SHANK2-218ENST00000601538 DNAH11Q96DT5 4516 aa4.3□□□□□ -1.72
SHANK2-218ENST00000601538 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
SHANK2-218ENST00000601538 VPS13DQ5THJ4 4388 aa4.27□□□□□ -1.73
SHANK2-218ENST00000601538 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
SHANK2-218ENST00000601538 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
SHANK2-218ENST00000601538 SPRR2EP22531 72 aa4.22□□□□□ -1.73
SHANK2-218ENST00000601538 SPRR2BP35325 72 aa4.22□□□□□ -1.73
SHANK2-218ENST00000601538 SPRR2AP35326 72 aa4.22□□□□□ -1.73
SHANK2-218ENST00000601538 KRTAP4-1Q9BYQ7 146 aa4.22□□□□□ -1.73
SHANK2-218ENST00000601538 MT1FP04733 61 aa4.21□□□□□ -1.73
SHANK2-218ENST00000601538 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
SHANK2-218ENST00000601538 FAT2Q9NYQ8 4349 aa4.19□□□□□ -1.74
SHANK2-218ENST00000601538 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
SHANK2-218ENST00000601538 DNAH9Q9NYC9 4486 aa4.16□□□□□ -1.74
SHANK2-218ENST00000601538 LCE2BO14633 110 aa4.13□□□□□ -1.75
SHANK2-218ENST00000601538 SPRR2DP22532 72 aa4.12□□□□□ -1.75
SHANK2-218ENST00000601538 PKHD1L1Q86WI1 4243 aa4.12□□□□□ -1.75
SHANK2-218ENST00000601538 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
SHANK2-218ENST00000601538 STARD9Q9P2P6 4700 aa4.09□□□□□ -1.76
SHANK2-218ENST00000601538 MT1GP13640 62 aa4.08□□□□□ -1.76
SHANK2-218ENST00000601538 MT1XP80297 61 aa4.06□□□□□ -1.76
SHANK2-218ENST00000601538 LRP1Q07954 4544 aaKnown RBP4.06□□□□□ -1.76
SHANK2-218ENST00000601538 PLECQ15149 4684 aaKnown RBP4.05□□□□□ -1.76
SHANK2-218ENST00000601538 HSPG2P98160 4391 aa4.04□□□□□ -1.76
SHANK2-218ENST00000601538 DNAH5Q8TE73 4624 aa4.02□□□□□ -1.77
SHANK2-218ENST00000601538 PKD1P98161 4303 aa3.99□□□□□ -1.77
SHANK2-218ENST00000601538 MT1LQ93083 61 aa3.98□□□□□ -1.77
SHANK2-218ENST00000601538 DYNC1H1Q14204 4646 aaKnown RBP3.98□□□□□ -1.77
SHANK2-218ENST00000601538 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
SHANK2-218ENST00000601538 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
SHANK2-218ENST00000601538 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
SHANK2-218ENST00000601538 PRM1P04553 51 aa3.89□□□□□ -1.79
SHANK2-218ENST00000601538 LCE2CQ5TA81 110 aa3.87□□□□□ -1.79
SHANK2-218ENST00000601538 MT1EP04732 61 aa3.86□□□□□ -1.79
SHANK2-218ENST00000601538 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
SHANK2-218ENST00000601538 TNXBP22105 4242 aa3.81□□□□□ -1.8
SHANK2-218ENST00000601538 RYR1P21817 5038 aa3.81□□□□□ -1.8
SHANK2-218ENST00000601538 MT1BP07438 61 aa3.8□□□□□ -1.8
SHANK2-218ENST00000601538 LRP1BQ9NZR2 4599 aa3.77□□□□□ -1.81
SHANK2-218ENST00000601538 LCE2DQ5TA82 110 aaPredicted RBP3.76□□□□□ -1.81
SHANK2-218ENST00000601538 MT1AP04731 61 aa3.75□□□□□ -1.81
SHANK2-218ENST00000601538 APOBP04114 4563 aaKnown RBP3.74□□□□□ -1.81
SHANK2-218ENST00000601538 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.81
SHANK2-218ENST00000601538 SACSQ9NZJ4 4579 aa3.7□□□□□ -1.82
SHANK2-218ENST00000601538 FAT1Q14517 4588 aa3.69□□□□□ -1.82
SHANK2-218ENST00000601538 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
SHANK2-218ENST00000601538 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
SHANK2-218ENST00000601538 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
SHANK2-218ENST00000601538 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
SHANK2-218ENST00000601538 MT4P47944 62 aa3.61□□□□□ -1.83
SHANK2-218ENST00000601538 MT1MQ8N339 61 aa3.59□□□□□ -1.83
SHANK2-218ENST00000601538 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
SHANK2-218ENST00000601538 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.85
SHANK2-218ENST00000601538 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
SHANK2-218ENST00000601538 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
SHANK2-218ENST00000601538 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
SHANK2-218ENST00000601538 FAT3Q8TDW7 4589 aa3.46□□□□□ -1.86
SHANK2-218ENST00000601538 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
SHANK2-218ENST00000601538 LRP2P98164 4655 aa3.38□□□□□ -1.87
SHANK2-218ENST00000601538 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
SHANK2-218ENST00000601538 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
SHANK2-218ENST00000601538 RYR3Q15413 4870 aa3.33□□□□□ -1.88
SHANK2-218ENST00000601538 KRTAP19-6Q3LI70 58 aa3.33□□□□□ -1.88
SHANK2-218ENST00000601538 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
SHANK2-218ENST00000601538 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms