RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 HERC2O95714 4834 aa9.36□□□□□ -0.91
LTBP4-229ENST00000601032 KRTAP10-4P60372 401 aaPredicted RBP9.36□□□□□ -0.91
LTBP4-229ENST00000601032 Q5VSD8 79 aa9.34□□□□□ -0.91
LTBP4-229ENST00000601032 A0A1B0GU33 70 aa9.34□□□□□ -0.91
LTBP4-229ENST00000601032 Q8N1X5 172 aa9.33□□□□□ -0.92
LTBP4-229ENST00000601032 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
LTBP4-229ENST00000601032 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
LTBP4-229ENST00000601032 H1FX-AS1Q4G0G2 97 aa9.29□□□□□ -0.92
LTBP4-229ENST00000601032 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
LTBP4-229ENST00000601032 FLG2Q5D862 2391 aaPredicted RBP9.25□□□□□ -0.93
LTBP4-229ENST00000601032 CRIPTQ9P021 101 aa9.25□□□□□ -0.93
LTBP4-229ENST00000601032 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
LTBP4-229ENST00000601032 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
LTBP4-229ENST00000601032 SPINK1P00995 79 aa9.2□□□□□ -0.94
LTBP4-229ENST00000601032 TNXBP22105 4242 aa9.16□□□□□ -0.94
LTBP4-229ENST00000601032 PCLOQ9Y6V0 5065 aa9.14□□□□□ -0.95
LTBP4-229ENST00000601032 TPRXLQ17RH7 258 aa9.13□□□□□ -0.95
LTBP4-229ENST00000601032 LUZP6Q538Z0 58 aa9.13□□□□□ -0.95
LTBP4-229ENST00000601032 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
LTBP4-229ENST00000601032 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
LTBP4-229ENST00000601032 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
LTBP4-229ENST00000601032 C9orf92A6NGG3 77 aa9□□□□□ -0.97
LTBP4-229ENST00000601032 RPL37P61927 97 aaKnown RBP8.99□□□□□ -0.97
LTBP4-229ENST00000601032 MT1HL1P0DM35 61 aa8.95□□□□□ -0.98
LTBP4-229ENST00000601032 DMBT1Q9UGM3 2413 aaPredicted RBP8.93□□□□□ -0.98
LTBP4-229ENST00000601032 SEC61BP60468 96 aaKnown RBP8.93□□□□□ -0.98
LTBP4-229ENST00000601032 KRTAP10-8P60410 259 aa8.92□□□□□ -0.98
LTBP4-229ENST00000601032 J3QL48 77 aa8.84□□□□□ -0.99
LTBP4-229ENST00000601032 HERC1Q15751 4861 aa8.84□□□□□ -0.99
LTBP4-229ENST00000601032 C10orf95Q9H7T3 257 aa8.83□□□□□ -1
LTBP4-229ENST00000601032 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
LTBP4-229ENST00000601032 XP32Q5T750 250 aa8.61□□□□□ -1.03
LTBP4-229ENST00000601032 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
LTBP4-229ENST00000601032 S4R3F8 94 aa8.59□□□□□ -1.03
LTBP4-229ENST00000601032 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
LTBP4-229ENST00000601032 LPAP08519 4548 aa8.57□□□□□ -1.04
LTBP4-229ENST00000601032 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
LTBP4-229ENST00000601032 A0A0D9SG42 100 aa8.56□□□□□ -1.04
LTBP4-229ENST00000601032 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
LTBP4-229ENST00000601032 LRP2P98164 4655 aa8.54□□□□□ -1.04
LTBP4-229ENST00000601032 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
LTBP4-229ENST00000601032 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
LTBP4-229ENST00000601032 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
LTBP4-229ENST00000601032 KRTAP12-1P59990 96 aa8.36□□□□□ -1.07
LTBP4-229ENST00000601032 UBR4Q5T4S7 5183 aa8.32□□□□□ -1.08
LTBP4-229ENST00000601032 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
LTBP4-229ENST00000601032 MUC17Q685J3 4493 aa8.23□□□□□ -1.09
LTBP4-229ENST00000601032 MUC2Q02817 5179 aa8.21□□□□□ -1.1
LTBP4-229ENST00000601032 RNF213Q63HN8 5207 aa8.18□□□□□ -1.1
LTBP4-229ENST00000601032 M0QZ58 72 aa8.16□□□□□ -1.1
LTBP4-229ENST00000601032 KRTAP4-1Q9BYQ7 146 aa8.12□□□□□ -1.11
LTBP4-229ENST00000601032 PRO2289Q9P1D8 64 aa8.07□□□□□ -1.12
LTBP4-229ENST00000601032 PP632Q6XCG6 107 aa8.03□□□□□ -1.12
LTBP4-229ENST00000601032 KRTAP19-2Q3LHN2 52 aa7.92□□□□□ -1.14
LTBP4-229ENST00000601032 FAT4Q6V0I7 4981 aa7.86□□□□□ -1.15
LTBP4-229ENST00000601032 SPRR5A0A1B0GTR4 108 aa7.82□□□□□ -1.16
LTBP4-229ENST00000601032 FLGP20930 4061 aaPredicted RBP7.8□□□□□ -1.16
LTBP4-229ENST00000601032 INE1O15225 51 aa7.79□□□□□ -1.16
LTBP4-229ENST00000601032 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.17
LTBP4-229ENST00000601032 LCE2CQ5TA81 110 aa7.71□□□□□ -1.17
LTBP4-229ENST00000601032 R4GN34 69 aa7.6□□□□□ -1.19
LTBP4-229ENST00000601032 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.19
LTBP4-229ENST00000601032 MT1HP80294 61 aa7.56□□□□□ -1.2
LTBP4-229ENST00000601032 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
LTBP4-229ENST00000601032 M0R2T5 61 aa7.43□□□□□ -1.22
LTBP4-229ENST00000601032 TNP1P09430 55 aa7.25□□□□□ -1.25
LTBP4-229ENST00000601032 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
LTBP4-229ENST00000601032 MT2AP02795 61 aa7.18□□□□□ -1.26
LTBP4-229ENST00000601032 KRTAP19-1Q8IUB9 90 aa7.17□□□□□ -1.26
LTBP4-229ENST00000601032 MT1FP04733 61 aa7.16□□□□□ -1.26
LTBP4-229ENST00000601032 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
LTBP4-229ENST00000601032 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
LTBP4-229ENST00000601032 KRTAP9-3Q9BYQ3 159 aa6.99□□□□□ -1.29
LTBP4-229ENST00000601032 FSIP2Q5CZC0 6907 aa6.92□□□□□ -1.3
LTBP4-229ENST00000601032 LCE2DQ5TA82 110 aaPredicted RBP6.91□□□□□ -1.3
LTBP4-229ENST00000601032 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
LTBP4-229ENST00000601032 LCE2BO14633 110 aa6.88□□□□□ -1.31
LTBP4-229ENST00000601032 KRTAP19-8Q3LI54 63 aa6.87□□□□□ -1.31
LTBP4-229ENST00000601032 USH2AO75445 5202 aa6.87□□□□□ -1.31
LTBP4-229ENST00000601032 MT1BP07438 61 aa6.85□□□□□ -1.31
LTBP4-229ENST00000601032 SSPOA2VEC9 5147 aa6.72□□□□□ -1.33
LTBP4-229ENST00000601032 MT1XP80297 61 aa6.71□□□□□ -1.33
LTBP4-229ENST00000601032 KRTAP10-5P60370 271 aa6.71□□□□□ -1.34
LTBP4-229ENST00000601032 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
LTBP4-229ENST00000601032 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
LTBP4-229ENST00000601032 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
LTBP4-229ENST00000601032 CRCT1Q9UGL9 99 aa6.59□□□□□ -1.35
LTBP4-229ENST00000601032 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
LTBP4-229ENST00000601032 KRTAP19-6Q3LI70 58 aa6.49□□□□□ -1.37
LTBP4-229ENST00000601032 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
LTBP4-229ENST00000601032 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
LTBP4-229ENST00000601032 KMT2DO14686 5537 aa6.35□□□□□ -1.39
LTBP4-229ENST00000601032 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
LTBP4-229ENST00000601032 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
LTBP4-229ENST00000601032 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
LTBP4-229ENST00000601032 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
LTBP4-229ENST00000601032 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
LTBP4-229ENST00000601032 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
LTBP4-229ENST00000601032 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
LTBP4-229ENST00000601032 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms