RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 MUC17Q685J3 4493 aa10.21□□□□□ -0.77
PNKP-214ENST00000600573 UBR4Q5T4S7 5183 aa10.17□□□□□ -0.78
PNKP-214ENST00000600573 A0A1B0GU69 56 aa10.17□□□□□ -0.78
PNKP-214ENST00000600573 BRK1Q8WUW1 75 aa10.17□□□□□ -0.78
PNKP-214ENST00000600573 H1FX-AS1Q4G0G2 97 aa10.12□□□□□ -0.79
PNKP-214ENST00000600573 A6NED7 52 aa10.1□□□□□ -0.79
PNKP-214ENST00000600573 PRO0628Q9UI54 55 aa10.07□□□□□ -0.8
PNKP-214ENST00000600573 SEC61GP60059 68 aa10.05□□□□□ -0.8
PNKP-214ENST00000600573 S4R3F8 94 aa10.05□□□□□ -0.8
PNKP-214ENST00000600573 KRTAP4-1Q9BYQ7 146 aa10.04□□□□□ -0.8
PNKP-214ENST00000600573 LCA10Q71F78 164 aa10□□□□□ -0.81
PNKP-214ENST00000600573 CDC42SE1Q9NRR8 79 aa9.96□□□□□ -0.81
PNKP-214ENST00000600573 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
PNKP-214ENST00000600573 UQCR11O14957 56 aa9.89□□□□□ -0.83
PNKP-214ENST00000600573 RNF213Q63HN8 5207 aa9.88□□□□□ -0.83
PNKP-214ENST00000600573 A8MU10 97 aa9.86□□□□□ -0.83
PNKP-214ENST00000600573 CSAG1Q6PB30 78 aa9.85□□□□□ -0.83
PNKP-214ENST00000600573 KRTAP19-2Q3LHN2 52 aa9.82□□□□□ -0.84
PNKP-214ENST00000600573 MIR22HGQ0VDD5 57 aa9.81□□□□□ -0.84
PNKP-214ENST00000600573 SPATA8Q6RVD6 105 aa9.81□□□□□ -0.84
PNKP-214ENST00000600573 SVIPQ8NHG7 77 aa9.79□□□□□ -0.84
PNKP-214ENST00000600573 MUC2Q02817 5179 aa9.77□□□□□ -0.85
PNKP-214ENST00000600573 A0A1B0GU33 70 aa9.77□□□□□ -0.85
PNKP-214ENST00000600573 KRTAP10-6P60371 365 aaPredicted RBP9.68□□□□□ -0.86
PNKP-214ENST00000600573 H0YAA0 97 aa9.67□□□□□ -0.86
PNKP-214ENST00000600573 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
PNKP-214ENST00000600573 ADM2Q7Z4H4 148 aa9.61□□□□□ -0.87
PNKP-214ENST00000600573 FLGP20930 4061 aaPredicted RBP9.61□□□□□ -0.87
PNKP-214ENST00000600573 PMAIP1Q13794 54 aa9.6□□□□□ -0.87
PNKP-214ENST00000600573 P0C880 135 aa9.57□□□□□ -0.88
PNKP-214ENST00000600573 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
PNKP-214ENST00000600573 A6NN06 94 aa9.53□□□□□ -0.88
PNKP-214ENST00000600573 KRTAP13-4Q3LI77 160 aa9.46□□□□□ -0.89
PNKP-214ENST00000600573 MT1HP80294 61 aa9.4□□□□□ -0.9
PNKP-214ENST00000600573 M0QZ58 72 aa9.39□□□□□ -0.91
PNKP-214ENST00000600573 FAT4Q6V0I7 4981 aa9.36□□□□□ -0.91
PNKP-214ENST00000600573 M0R2T5 61 aa9.36□□□□□ -0.91
PNKP-214ENST00000600573 K7ERS5 55 aa9.35□□□□□ -0.91
PNKP-214ENST00000600573 A0A0D9SG42 100 aa9.33□□□□□ -0.92
PNKP-214ENST00000600573 KTN1-AS1Q86SY8 53 aa9.31□□□□□ -0.92
PNKP-214ENST00000600573 CRIPTQ9P021 101 aa9.27□□□□□ -0.92
PNKP-214ENST00000600573 R4GN34 69 aa9.27□□□□□ -0.93
PNKP-214ENST00000600573 LORP23490 312 aaPredicted RBP9.16□□□□□ -0.94
PNKP-214ENST00000600573 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
PNKP-214ENST00000600573 KRTAP12-1P59990 96 aa9.13□□□□□ -0.95
PNKP-214ENST00000600573 KRTAP12-2P59991 146 aa9.11□□□□□ -0.95
PNKP-214ENST00000600573 LINC01554Q52M75 96 aa9.09□□□□□ -0.95
PNKP-214ENST00000600573 SPINT4Q6UDR6 99 aa9.09□□□□□ -0.95
PNKP-214ENST00000600573 KRTAP9-8Q9BYQ0 159 aa9.07□□□□□ -0.96
PNKP-214ENST00000600573 MT2AP02795 61 aa9.04□□□□□ -0.96
PNKP-214ENST00000600573 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
PNKP-214ENST00000600573 ROMO1P60602 79 aa8.99□□□□□ -0.97
PNKP-214ENST00000600573 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
PNKP-214ENST00000600573 PRAC1Q96KF2 57 aa8.97□□□□□ -0.97
PNKP-214ENST00000600573 MT1FP04733 61 aa8.96□□□□□ -0.98
PNKP-214ENST00000600573 SPRR2GQ9BYE4 73 aa8.96□□□□□ -0.98
PNKP-214ENST00000600573 KRTAP19-1Q8IUB9 90 aa8.86□□□□□ -0.99
PNKP-214ENST00000600573 KRTAP9-3Q9BYQ3 159 aa8.75□□□□□ -1.01
PNKP-214ENST00000600573 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
PNKP-214ENST00000600573 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
PNKP-214ENST00000600573 KRTAP19-8Q3LI54 63 aa8.72□□□□□ -1.01
PNKP-214ENST00000600573 CAMK2N1Q7Z7J9 78 aa8.72□□□□□ -1.01
PNKP-214ENST00000600573 KRTAP9-6A0A140TA67 174 aa8.71□□□□□ -1.02
PNKP-214ENST00000600573 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
PNKP-214ENST00000600573 FSIP2Q5CZC0 6907 aa8.61□□□□□ -1.03
PNKP-214ENST00000600573 LCE2DQ5TA82 110 aaPredicted RBP8.59□□□□□ -1.03
PNKP-214ENST00000600573 MT1BP07438 61 aa8.51□□□□□ -1.05
PNKP-214ENST00000600573 CRCT1Q9UGL9 99 aa8.45□□□□□ -1.06
PNKP-214ENST00000600573 LCE2BO14633 110 aa8.44□□□□□ -1.06
PNKP-214ENST00000600573 TNP1P09430 55 aa8.33□□□□□ -1.08
PNKP-214ENST00000600573 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
PNKP-214ENST00000600573 KRTAP10-5P60370 271 aa8.25□□□□□ -1.09
PNKP-214ENST00000600573 MT1XP80297 61 aa8.25□□□□□ -1.09
PNKP-214ENST00000600573 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
PNKP-214ENST00000600573 USH2AO75445 5202 aa8.22□□□□□ -1.09
PNKP-214ENST00000600573 KRTAP23-1A1A580 65 aa8.18□□□□□ -1.1
PNKP-214ENST00000600573 SSPOA2VEC9 5147 aa8.1□□□□□ -1.11
PNKP-214ENST00000600573 KRTAP19-6Q3LI70 58 aa8□□□□□ -1.13
PNKP-214ENST00000600573 LCE3AQ5TA76 89 aa7.92□□□□□ -1.14
PNKP-214ENST00000600573 FCGBPQ9Y6R7 5405 aaPredicted RBP7.9□□□□□ -1.14
PNKP-214ENST00000600573 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.89□□□□□ -1.15
PNKP-214ENST00000600573 KRTAP10-7P60409 375 aaPredicted RBP7.89□□□□□ -1.15
PNKP-214ENST00000600573 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
PNKP-214ENST00000600573 KRTAP9-7A8MTY7 169 aa7.82□□□□□ -1.16
PNKP-214ENST00000600573 KRTAP8-1Q8IUC2 63 aa7.77□□□□□ -1.17
PNKP-214ENST00000600573 KRTAP15-1Q3LI76 137 aa7.76□□□□□ -1.17
PNKP-214ENST00000600573 MACF1Q9UPN3 7388 aaKnown RBP7.69□□□□□ -1.18
PNKP-214ENST00000600573 SYNE2Q8WXH0 6885 aaKnown RBP7.65□□□□□ -1.19
PNKP-214ENST00000600573 KRTAP12-3P60328 96 aa7.6□□□□□ -1.19
PNKP-214ENST00000600573 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
PNKP-214ENST00000600573 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
PNKP-214ENST00000600573 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
PNKP-214ENST00000600573 KMT2DO14686 5537 aa7.43□□□□□ -1.22
PNKP-214ENST00000600573 SPRR5A0A1B0GTR4 108 aa7.39□□□□□ -1.23
PNKP-214ENST00000600573 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
PNKP-214ENST00000600573 KRTAP19-4Q3LI73 84 aa7.32□□□□□ -1.24
PNKP-214ENST00000600573 KRTAP6-3Q3LI67 103 aa7.3□□□□□ -1.24
PNKP-214ENST00000600573 LUZP6Q538Z0 58 aa7.29□□□□□ -1.24
PNKP-214ENST00000600573 NDUFAF8A1L188 74 aa7.27□□□□□ -1.25
PNKP-214ENST00000600573 MT1EP04732 61 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms