RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 FAM236AA0A1B0GUQ0 79 aa6.15□□□□□ -1.42
ARHGEF1-222ENST00000600517 FAM236BA0A1B0GV22 79 aa6.15□□□□□ -1.42
ARHGEF1-222ENST00000600517 LINC00208Q96KT6 92 aa6.14□□□□□ -1.43
ARHGEF1-222ENST00000600517 MP68P56378 58 aa6.12□□□□□ -1.43
ARHGEF1-222ENST00000600517 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
ARHGEF1-222ENST00000600517 A8MUN3 132 aa6.09□□□□□ -1.43
ARHGEF1-222ENST00000600517 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
ARHGEF1-222ENST00000600517 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
ARHGEF1-222ENST00000600517 NDUFC1O43677 76 aa6.06□□□□□ -1.44
ARHGEF1-222ENST00000600517 H3BPC8 53 aa6.05□□□□□ -1.44
ARHGEF1-222ENST00000600517 SCGB1A1P11684 91 aa6.05□□□□□ -1.44
ARHGEF1-222ENST00000600517 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
ARHGEF1-222ENST00000600517 TRAV7A0A075B6U4 112 aa6.02□□□□□ -1.45
ARHGEF1-222ENST00000600517 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
ARHGEF1-222ENST00000600517 H0YAA0 97 aa6.01□□□□□ -1.45
ARHGEF1-222ENST00000600517 MT1BP07438 61 aa6.01□□□□□ -1.45
ARHGEF1-222ENST00000600517 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
ARHGEF1-222ENST00000600517 Q5VV11 94 aa6□□□□□ -1.45
ARHGEF1-222ENST00000600517 SMIM20Q8N5G0 67 aa5.99□□□□□ -1.45
ARHGEF1-222ENST00000600517 SERP2Q8N6R1 65 aa5.95□□□□□ -1.46
ARHGEF1-222ENST00000600517 DMAC1Q96GE9 116 aa5.94□□□□□ -1.46
ARHGEF1-222ENST00000600517 ADM2Q7Z4H4 148 aa5.92□□□□□ -1.46
ARHGEF1-222ENST00000600517 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.46
ARHGEF1-222ENST00000600517 A6NN06 94 aa5.9□□□□□ -1.46
ARHGEF1-222ENST00000600517 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
ARHGEF1-222ENST00000600517 COX7CP15954 63 aa5.87□□□□□ -1.47
ARHGEF1-222ENST00000600517 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
ARHGEF1-222ENST00000600517 C20orf197Q8N268 126 aa5.86□□□□□ -1.47
ARHGEF1-222ENST00000600517 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
ARHGEF1-222ENST00000600517 ACYP2P14621 99 aa5.82□□□□□ -1.48
ARHGEF1-222ENST00000600517 CYSTM1Q9H1C7 97 aa5.82□□□□□ -1.48
ARHGEF1-222ENST00000600517 ANAPC13Q9BS18 74 aa5.81□□□□□ -1.48
ARHGEF1-222ENST00000600517 P0C880 135 aa5.8□□□□□ -1.48
ARHGEF1-222ENST00000600517 KRTAP3-2Q9BYR7 98 aa5.79□□□□□ -1.48
ARHGEF1-222ENST00000600517 R4GN34 69 aa5.77□□□□□ -1.49
ARHGEF1-222ENST00000600517 CCDC179H3BU77 68 aa5.76□□□□□ -1.49
ARHGEF1-222ENST00000600517 H7BZZ5 65 aa5.74□□□□□ -1.49
ARHGEF1-222ENST00000600517 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
ARHGEF1-222ENST00000600517 SPTSSBQ8NFR3 76 aa5.73□□□□□ -1.49
ARHGEF1-222ENST00000600517 M0QZ58 72 aa5.72□□□□□ -1.49
ARHGEF1-222ENST00000600517 PLAC4Q8WY50 150 aa5.71□□□□□ -1.5
ARHGEF1-222ENST00000600517 CHKB-CPT1BH3BT56 60 aa5.68□□□□□ -1.5
ARHGEF1-222ENST00000600517 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
ARHGEF1-222ENST00000600517 MT1XP80297 61 aa5.66□□□□□ -1.5
ARHGEF1-222ENST00000600517 LINC01554Q52M75 96 aa5.62□□□□□ -1.51
ARHGEF1-222ENST00000600517 KRTAP5-9P26371 169 aa5.6□□□□□ -1.51
ARHGEF1-222ENST00000600517 COA5Q86WW8 74 aa5.56□□□□□ -1.52
ARHGEF1-222ENST00000600517 NEBP20929 6669 aa5.55□□□□□ -1.52
ARHGEF1-222ENST00000600517 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
ARHGEF1-222ENST00000600517 TMEM258P61165 79 aa5.51□□□□□ -1.53
ARHGEF1-222ENST00000600517 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
ARHGEF1-222ENST00000600517 PCP4P48539 62 aa5.49□□□□□ -1.53
ARHGEF1-222ENST00000600517 KMT2DO14686 5537 aa5.48□□□□□ -1.53
ARHGEF1-222ENST00000600517 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.54
ARHGEF1-222ENST00000600517 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
ARHGEF1-222ENST00000600517 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
ARHGEF1-222ENST00000600517 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
ARHGEF1-222ENST00000600517 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
ARHGEF1-222ENST00000600517 SEC61GP60059 68 aa5.39□□□□□ -1.55
ARHGEF1-222ENST00000600517 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
ARHGEF1-222ENST00000600517 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
ARHGEF1-222ENST00000600517 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
ARHGEF1-222ENST00000600517 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
ARHGEF1-222ENST00000600517 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
ARHGEF1-222ENST00000600517 KRTAP20-1Q3LI63 56 aa5.33□□□□□ -1.56
ARHGEF1-222ENST00000600517 A0A1B0GU33 70 aa5.31□□□□□ -1.56
ARHGEF1-222ENST00000600517 SPRR2EP22531 72 aa5.31□□□□□ -1.56
ARHGEF1-222ENST00000600517 SPRR2BP35325 72 aa5.31□□□□□ -1.56
ARHGEF1-222ENST00000600517 SPRR2AP35326 72 aa5.31□□□□□ -1.56
ARHGEF1-222ENST00000600517 CAMK2N1Q7Z7J9 78 aa5.31□□□□□ -1.56
ARHGEF1-222ENST00000600517 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
ARHGEF1-222ENST00000600517 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
ARHGEF1-222ENST00000600517 A0A0D9SG42 100 aa5.27□□□□□ -1.57
ARHGEF1-222ENST00000600517 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
ARHGEF1-222ENST00000600517 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
ARHGEF1-222ENST00000600517 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
ARHGEF1-222ENST00000600517 A0A1B0GU69 56 aa5.23□□□□□ -1.57
ARHGEF1-222ENST00000600517 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
ARHGEF1-222ENST00000600517 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
ARHGEF1-222ENST00000600517 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
ARHGEF1-222ENST00000600517 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
ARHGEF1-222ENST00000600517 SPRR2DP22532 72 aa5.14□□□□□ -1.59
ARHGEF1-222ENST00000600517 Q1T7F1 81 aa5.14□□□□□ -1.59
ARHGEF1-222ENST00000600517 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
ARHGEF1-222ENST00000600517 A8MU10 97 aa5.1□□□□□ -1.59
ARHGEF1-222ENST00000600517 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
ARHGEF1-222ENST00000600517 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
ARHGEF1-222ENST00000600517 V9GYY9 64 aa5.07□□□□□ -1.6
ARHGEF1-222ENST00000600517 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
ARHGEF1-222ENST00000600517 PSPHP1O15172 72 aa5.05□□□□□ -1.6
ARHGEF1-222ENST00000600517 MT1EP04732 61 aa5.01□□□□□ -1.61
ARHGEF1-222ENST00000600517 LCE3BQ5TA77 95 aa5□□□□□ -1.61
ARHGEF1-222ENST00000600517 UQCR11O14957 56 aa4.99□□□□□ -1.61
ARHGEF1-222ENST00000600517 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
ARHGEF1-222ENST00000600517 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
ARHGEF1-222ENST00000600517 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
ARHGEF1-222ENST00000600517 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
ARHGEF1-222ENST00000600517 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
ARHGEF1-222ENST00000600517 TNP1P09430 55 aa4.92□□□□□ -1.62
ARHGEF1-222ENST00000600517 MT1GP13640 62 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms