RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
LIG1-209ENST00000596104 H0YAA0 97 aa4.16□□□□□ -1.74
LIG1-209ENST00000596104 A0A1W2PPM0 123 aa4.15□□□□□ -1.75
LIG1-209ENST00000596104 C9orf118A6NHY6 69 aa4.15□□□□□ -1.75
LIG1-209ENST00000596104 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
LIG1-209ENST00000596104 UBL5Q9BZL1 73 aa4.15□□□□□ -1.75
LIG1-209ENST00000596104 CYP4F30PQ9H0H9 118 aa4.15□□□□□ -1.75
LIG1-209ENST00000596104 SPRR2DP22532 72 aa4.14□□□□□ -1.75
LIG1-209ENST00000596104 BATFQ16520 125 aa4.14□□□□□ -1.75
LIG1-209ENST00000596104 TAX1BP3O14907 124 aa4.13□□□□□ -1.75
LIG1-209ENST00000596104 A8MUN3 132 aa4.12□□□□□ -1.75
LIG1-209ENST00000596104 SMIM6P0DI80 62 aa4.11□□□□□ -1.75
LIG1-209ENST00000596104 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
LIG1-209ENST00000596104 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
LIG1-209ENST00000596104 NDUFC1O43677 76 aa4.09□□□□□ -1.75
LIG1-209ENST00000596104 ADM2Q7Z4H4 148 aa4.09□□□□□ -1.75
LIG1-209ENST00000596104 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
LIG1-209ENST00000596104 K7EP34 96 aa4.07□□□□□ -1.76
LIG1-209ENST00000596104 SPCS1Q9Y6A9 102 aa4.07□□□□□ -1.76
LIG1-209ENST00000596104 TRAV22A0A0B4J277 110 aa4.06□□□□□ -1.76
LIG1-209ENST00000596104 LOC101927531A0A1B0GV80 90 aa4.06□□□□□ -1.76
LIG1-209ENST00000596104 LOC105371267A0A1B0GV96 52 aa4.06□□□□□ -1.76
LIG1-209ENST00000596104 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
LIG1-209ENST00000596104 PRO0461Q9UI25 63 aa4.05□□□□□ -1.76
LIG1-209ENST00000596104 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
LIG1-209ENST00000596104 ACYP1P07311 99 aa3.99□□□□□ -1.77
LIG1-209ENST00000596104 P0C880 135 aa3.99□□□□□ -1.77
LIG1-209ENST00000596104 R4GN34 69 aa3.99□□□□□ -1.77
LIG1-209ENST00000596104 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
LIG1-209ENST00000596104 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
LIG1-209ENST00000596104 M0QZ58 72 aa3.96□□□□□ -1.78
LIG1-209ENST00000596104 H0Y9P7 68 aa3.95□□□□□ -1.78
LIG1-209ENST00000596104 UQCRQO14949 82 aa3.95□□□□□ -1.78
LIG1-209ENST00000596104 ATOX1O00244 68 aa3.94□□□□□ -1.78
LIG1-209ENST00000596104 C20orf197Q8N268 126 aa3.93□□□□□ -1.78
LIG1-209ENST00000596104 KRTAP3-2Q9BYR7 98 aa3.92□□□□□ -1.78
LIG1-209ENST00000596104 LINC01554Q52M75 96 aa3.91□□□□□ -1.78
LIG1-209ENST00000596104 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
LIG1-209ENST00000596104 ETDBQ3ZM63 59 aa3.89□□□□□ -1.79
LIG1-209ENST00000596104 COL5A1-AS1Q5SY13 56 aa3.88□□□□□ -1.79
LIG1-209ENST00000596104 LINC00208Q96KT6 92 aa3.87□□□□□ -1.79
LIG1-209ENST00000596104 F8W1H4 67 aa3.85□□□□□ -1.79
LIG1-209ENST00000596104 HIST1H4AP62805 103 aaKnown RBP3.85□□□□□ -1.79
LIG1-209ENST00000596104 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
LIG1-209ENST00000596104 PCP4L1A6NKN8 68 aa3.84□□□□□ -1.79
LIG1-209ENST00000596104 ATP5EP2Q5VTU8 51 aa3.84□□□□□ -1.79
LIG1-209ENST00000596104 GTF2H5Q6ZYL4 71 aa3.83□□□□□ -1.8
LIG1-209ENST00000596104 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
LIG1-209ENST00000596104 DMAC1Q96GE9 116 aa3.8□□□□□ -1.8
LIG1-209ENST00000596104 FAM240AA0A1B0GVK7 77 aa3.79□□□□□ -1.8
LIG1-209ENST00000596104 MP68P56378 58 aa3.79□□□□□ -1.8
LIG1-209ENST00000596104 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
LIG1-209ENST00000596104 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
LIG1-209ENST00000596104 MT-ATP8P03928 68 aa3.76□□□□□ -1.81
LIG1-209ENST00000596104 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
LIG1-209ENST00000596104 MT1EP04732 61 aa3.74□□□□□ -1.81
LIG1-209ENST00000596104 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
LIG1-209ENST00000596104 LINC00643Q86TS7 51 aa3.72□□□□□ -1.81
LIG1-209ENST00000596104 H3BPC8 53 aa3.71□□□□□ -1.82
LIG1-209ENST00000596104 TRAV7A0A075B6U4 112 aa3.7□□□□□ -1.82
LIG1-209ENST00000596104 CYSTM1Q9H1C7 97 aa3.67□□□□□ -1.82
LIG1-209ENST00000596104 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
LIG1-209ENST00000596104 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.82
LIG1-209ENST00000596104 MT4P47944 62 aa3.65□□□□□ -1.83
LIG1-209ENST00000596104 A0A1B0GV90 55 aa3.63□□□□□ -1.83
LIG1-209ENST00000596104 MT1GP13640 62 aa3.63□□□□□ -1.83
LIG1-209ENST00000596104 ACYP2P14621 99 aa3.63□□□□□ -1.83
LIG1-209ENST00000596104 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
LIG1-209ENST00000596104 CAMK2N1Q7Z7J9 78 aa3.63□□□□□ -1.83
LIG1-209ENST00000596104 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
LIG1-209ENST00000596104 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
LIG1-209ENST00000596104 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
LIG1-209ENST00000596104 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
LIG1-209ENST00000596104 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
LIG1-209ENST00000596104 MT1MQ8N339 61 aa3.58□□□□□ -1.84
LIG1-209ENST00000596104 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
LIG1-209ENST00000596104 A0A0D9SG42 100 aa3.55□□□□□ -1.84
LIG1-209ENST00000596104 CHKB-CPT1BH3BT56 60 aa3.55□□□□□ -1.84
LIG1-209ENST00000596104 SCGB1A1P11684 91 aa3.55□□□□□ -1.84
LIG1-209ENST00000596104 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
LIG1-209ENST00000596104 J3QR89 54 aa3.53□□□□□ -1.84
LIG1-209ENST00000596104 MT1LQ93083 61 aa3.53□□□□□ -1.84
LIG1-209ENST00000596104 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
LIG1-209ENST00000596104 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
LIG1-209ENST00000596104 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
LIG1-209ENST00000596104 K7ERU9 68 aa3.44□□□□□ -1.86
LIG1-209ENST00000596104 SPINT4Q6UDR6 99 aa3.41□□□□□ -1.86
LIG1-209ENST00000596104 KRTAP12-1P59990 96 aa3.4□□□□□ -1.87
LIG1-209ENST00000596104 SMIM20Q8N5G0 67 aa3.4□□□□□ -1.87
LIG1-209ENST00000596104 SPANXA2-OT1Q8N9U9 137 aa3.4□□□□□ -1.87
LIG1-209ENST00000596104 SNURFQ9Y675 71 aa3.4□□□□□ -1.87
LIG1-209ENST00000596104 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
LIG1-209ENST00000596104 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
LIG1-209ENST00000596104 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
LIG1-209ENST00000596104 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
LIG1-209ENST00000596104 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
LIG1-209ENST00000596104 SERP1Q9Y6X1 66 aa3.33□□□□□ -1.88
LIG1-209ENST00000596104 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
LIG1-209ENST00000596104 A0A1B0GU33 70 aa3.32□□□□□ -1.88
LIG1-209ENST00000596104 SEC61GP60059 68 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms