RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
TMEM38A-202ENST00000595452 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
TMEM38A-202ENST00000595452 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
TMEM38A-202ENST00000595452 LCE2BO14633 110 aa6.41□□□□□ -1.38
TMEM38A-202ENST00000595452 SSPOA2VEC9 5147 aa6.41□□□□□ -1.38
TMEM38A-202ENST00000595452 LCA10Q71F78 164 aa6.4□□□□□ -1.38
TMEM38A-202ENST00000595452 COX7CP15954 63 aa6.38□□□□□ -1.39
TMEM38A-202ENST00000595452 KLKP1Q107X0 134 aa6.38□□□□□ -1.39
TMEM38A-202ENST00000595452 C20orf197Q8N268 126 aa6.37□□□□□ -1.39
TMEM38A-202ENST00000595452 A8MUN3 132 aa6.36□□□□□ -1.39
TMEM38A-202ENST00000595452 ANAPC13Q9BS18 74 aa6.36□□□□□ -1.39
TMEM38A-202ENST00000595452 SNURFQ9Y675 71 aa6.34□□□□□ -1.39
TMEM38A-202ENST00000595452 NDUFC1O43677 76 aa6.31□□□□□ -1.4
TMEM38A-202ENST00000595452 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
TMEM38A-202ENST00000595452 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
TMEM38A-202ENST00000595452 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
TMEM38A-202ENST00000595452 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
TMEM38A-202ENST00000595452 ACYP2P14621 99 aa6.22□□□□□ -1.41
TMEM38A-202ENST00000595452 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
TMEM38A-202ENST00000595452 CRIPTQ9P021 101 aa6.22□□□□□ -1.41
TMEM38A-202ENST00000595452 MACF1Q9UPN3 7388 aaKnown RBP6.2□□□□□ -1.42
TMEM38A-202ENST00000595452 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
TMEM38A-202ENST00000595452 H0YAA0 97 aa6.19□□□□□ -1.42
TMEM38A-202ENST00000595452 CCDC179H3BU77 68 aa6.18□□□□□ -1.42
TMEM38A-202ENST00000595452 Q5VV11 94 aa6.18□□□□□ -1.42
TMEM38A-202ENST00000595452 H7BZZ5 65 aa6.17□□□□□ -1.42
TMEM38A-202ENST00000595452 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
TMEM38A-202ENST00000595452 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
TMEM38A-202ENST00000595452 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
TMEM38A-202ENST00000595452 CHKB-CPT1BH3BT56 60 aa6.1□□□□□ -1.43
TMEM38A-202ENST00000595452 ADM2Q7Z4H4 148 aa6.1□□□□□ -1.43
TMEM38A-202ENST00000595452 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.43
TMEM38A-202ENST00000595452 SPTSSBQ8NFR3 76 aa6.09□□□□□ -1.43
TMEM38A-202ENST00000595452 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
TMEM38A-202ENST00000595452 A6NN06 94 aa6.06□□□□□ -1.44
TMEM38A-202ENST00000595452 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
TMEM38A-202ENST00000595452 MT1BP07438 61 aa6.04□□□□□ -1.44
TMEM38A-202ENST00000595452 TMEM258P61165 79 aa6.02□□□□□ -1.45
TMEM38A-202ENST00000595452 COA5Q86WW8 74 aa6.01□□□□□ -1.45
TMEM38A-202ENST00000595452 R4GN34 69 aa6.01□□□□□ -1.45
TMEM38A-202ENST00000595452 PCP4P48539 62 aa5.99□□□□□ -1.45
TMEM38A-202ENST00000595452 M0QZ58 72 aa5.93□□□□□ -1.46
TMEM38A-202ENST00000595452 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
TMEM38A-202ENST00000595452 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
TMEM38A-202ENST00000595452 P0C880 135 aa5.91□□□□□ -1.46
TMEM38A-202ENST00000595452 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
TMEM38A-202ENST00000595452 SEC61GP60059 68 aa5.85□□□□□ -1.47
TMEM38A-202ENST00000595452 KRTAP6-3Q3LI67 103 aa5.85□□□□□ -1.47
TMEM38A-202ENST00000595452 LINC01554Q52M75 96 aa5.84□□□□□ -1.47
TMEM38A-202ENST00000595452 SERP1Q9Y6X1 66 aa5.83□□□□□ -1.48
TMEM38A-202ENST00000595452 A0A1B0GU69 56 aa5.73□□□□□ -1.49
TMEM38A-202ENST00000595452 PRR15LQ9BU68 103 aa5.71□□□□□ -1.5
TMEM38A-202ENST00000595452 RPS28P62857 69 aaKnown RBP5.7□□□□□ -1.5
TMEM38A-202ENST00000595452 MT1XP80297 61 aa5.7□□□□□ -1.5
TMEM38A-202ENST00000595452 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
TMEM38A-202ENST00000595452 NEBP20929 6669 aa5.7□□□□□ -1.5
TMEM38A-202ENST00000595452 MUC12Q9UKN1 5478 aa5.68□□□□□ -1.5
TMEM38A-202ENST00000595452 A0A1B0GU33 70 aa5.67□□□□□ -1.5
TMEM38A-202ENST00000595452 V9GYY9 64 aa5.67□□□□□ -1.5
TMEM38A-202ENST00000595452 SMIM26A0A096LP01 95 aa5.65□□□□□ -1.5
TMEM38A-202ENST00000595452 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
TMEM38A-202ENST00000595452 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
TMEM38A-202ENST00000595452 Q1T7F1 81 aa5.61□□□□□ -1.51
TMEM38A-202ENST00000595452 KMT2DO14686 5537 aa5.6□□□□□ -1.51
TMEM38A-202ENST00000595452 MDN1Q9NU22 5596 aa5.57□□□□□ -1.52
TMEM38A-202ENST00000595452 KRTAP13-4Q3LI77 160 aa5.56□□□□□ -1.52
TMEM38A-202ENST00000595452 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
TMEM38A-202ENST00000595452 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
TMEM38A-202ENST00000595452 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
TMEM38A-202ENST00000595452 UQCR11O14957 56 aa5.52□□□□□ -1.53
TMEM38A-202ENST00000595452 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
TMEM38A-202ENST00000595452 PSPHP1O15172 72 aa5.5□□□□□ -1.53
TMEM38A-202ENST00000595452 A0A0D9SG42 100 aa5.48□□□□□ -1.53
TMEM38A-202ENST00000595452 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
TMEM38A-202ENST00000595452 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
TMEM38A-202ENST00000595452 SPRR2EP22531 72 aa5.42□□□□□ -1.54
TMEM38A-202ENST00000595452 SPRR2BP35325 72 aa5.42□□□□□ -1.54
TMEM38A-202ENST00000595452 SPRR2AP35326 72 aa5.42□□□□□ -1.54
TMEM38A-202ENST00000595452 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
TMEM38A-202ENST00000595452 MIR22HGQ0VDD5 57 aa5.41□□□□□ -1.54
TMEM38A-202ENST00000595452 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
TMEM38A-202ENST00000595452 A8MU10 97 aa5.39□□□□□ -1.55
TMEM38A-202ENST00000595452 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
TMEM38A-202ENST00000595452 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
TMEM38A-202ENST00000595452 A6NED7 52 aa5.36□□□□□ -1.55
TMEM38A-202ENST00000595452 KRTAP12-1P59990 96 aa5.36□□□□□ -1.55
TMEM38A-202ENST00000595452 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
TMEM38A-202ENST00000595452 K7ERS5 55 aa5.29□□□□□ -1.56
TMEM38A-202ENST00000595452 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
TMEM38A-202ENST00000595452 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
TMEM38A-202ENST00000595452 SPRR2DP22532 72 aa5.24□□□□□ -1.57
TMEM38A-202ENST00000595452 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.58
TMEM38A-202ENST00000595452 TNP1P09430 55 aa5.14□□□□□ -1.59
TMEM38A-202ENST00000595452 KRTAP2-2Q9BYT5 123 aa5.12□□□□□ -1.59
TMEM38A-202ENST00000595452 KRTAP2-1Q9BYU5 128 aa5.12□□□□□ -1.59
TMEM38A-202ENST00000595452 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
TMEM38A-202ENST00000595452 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
TMEM38A-202ENST00000595452 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
TMEM38A-202ENST00000595452 MT1EP04732 61 aa5.06□□□□□ -1.6
TMEM38A-202ENST00000595452 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms