RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 EPPK1P58107 5090 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-205ENST00000594973 H0YAA0 97 aa9.28□□□□□ -0.92
SHKBP1-205ENST00000594973 MYCBP2O75592 4640 aa9.27□□□□□ -0.92
SHKBP1-205ENST00000594973 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
SHKBP1-205ENST00000594973 FAT3Q8TDW7 4589 aa9.24□□□□□ -0.93
SHKBP1-205ENST00000594973 DMBT1Q9UGM3 2413 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-205ENST00000594973 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
SHKBP1-205ENST00000594973 A0A1B0GU33 70 aa9.16□□□□□ -0.94
SHKBP1-205ENST00000594973 H1FX-AS1Q4G0G2 97 aa9.12□□□□□ -0.95
SHKBP1-205ENST00000594973 K7ERS5 55 aa9.09□□□□□ -0.95
SHKBP1-205ENST00000594973 P0C880 135 aa9.09□□□□□ -0.95
SHKBP1-205ENST00000594973 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
SHKBP1-205ENST00000594973 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.97
SHKBP1-205ENST00000594973 XP32Q5T750 250 aa8.94□□□□□ -0.98
SHKBP1-205ENST00000594973 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
SHKBP1-205ENST00000594973 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
SHKBP1-205ENST00000594973 ABCA13Q86UQ4 5058 aa8.91□□□□□ -0.98
SHKBP1-205ENST00000594973 KRTAP3-1Q9BYR8 98 aa8.89□□□□□ -0.99
SHKBP1-205ENST00000594973 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
SHKBP1-205ENST00000594973 SPINT4Q6UDR6 99 aa8.84□□□□□ -0.99
SHKBP1-205ENST00000594973 LRP2P98164 4655 aa8.79□□□□□ -1
SHKBP1-205ENST00000594973 LPAP08519 4548 aa8.79□□□□□ -1
SHKBP1-205ENST00000594973 TPRXLQ17RH7 258 aa8.77□□□□□ -1.01
SHKBP1-205ENST00000594973 HERC2O95714 4834 aa8.75□□□□□ -1.01
SHKBP1-205ENST00000594973 KRTAP15-1Q3LI76 137 aa8.75□□□□□ -1.01
SHKBP1-205ENST00000594973 BIRC6Q9NR09 4857 aa8.74□□□□□ -1.01
SHKBP1-205ENST00000594973 NDUFAF8A1L188 74 aa8.69□□□□□ -1.02
SHKBP1-205ENST00000594973 J3QL48 77 aa8.67□□□□□ -1.02
SHKBP1-205ENST00000594973 KRTAP10-6P60371 365 aaPredicted RBP8.62□□□□□ -1.03
SHKBP1-205ENST00000594973 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
SHKBP1-205ENST00000594973 C10orf95Q9H7T3 257 aa8.57□□□□□ -1.04
SHKBP1-205ENST00000594973 A0A0D9SG42 100 aa8.54□□□□□ -1.04
SHKBP1-205ENST00000594973 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
SHKBP1-205ENST00000594973 S4R3F8 94 aa8.53□□□□□ -1.04
SHKBP1-205ENST00000594973 KRTAP3-2Q9BYR7 98 aa8.51□□□□□ -1.05
SHKBP1-205ENST00000594973 PCLOQ9Y6V0 5065 aa8.45□□□□□ -1.06
SHKBP1-205ENST00000594973 SEC61BP60468 96 aaKnown RBP8.43□□□□□ -1.06
SHKBP1-205ENST00000594973 HERC1Q15751 4861 aa8.4□□□□□ -1.07
SHKBP1-205ENST00000594973 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
SHKBP1-205ENST00000594973 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
SHKBP1-205ENST00000594973 A0A0A0MQY5 61 aa8.35□□□□□ -1.07
SHKBP1-205ENST00000594973 KRTAP4-1Q9BYQ7 146 aa8.34□□□□□ -1.07
SHKBP1-205ENST00000594973 MUC2Q02817 5179 aa8.33□□□□□ -1.08
SHKBP1-205ENST00000594973 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
SHKBP1-205ENST00000594973 HMCN2Q8NDA2 5059 aa8.23□□□□□ -1.09
SHKBP1-205ENST00000594973 M0QZ58 72 aa8.16□□□□□ -1.1
SHKBP1-205ENST00000594973 LUZP6Q538Z0 58 aa8.15□□□□□ -1.1
SHKBP1-205ENST00000594973 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
SHKBP1-205ENST00000594973 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
SHKBP1-205ENST00000594973 FLGP20930 4061 aaPredicted RBP8.01□□□□□ -1.13
SHKBP1-205ENST00000594973 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
SHKBP1-205ENST00000594973 RNF213Q63HN8 5207 aa7.93□□□□□ -1.14
SHKBP1-205ENST00000594973 R4GN34 69 aa7.92□□□□□ -1.14
SHKBP1-205ENST00000594973 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
SHKBP1-205ENST00000594973 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
SHKBP1-205ENST00000594973 LCE2CQ5TA81 110 aa7.79□□□□□ -1.16
SHKBP1-205ENST00000594973 PP632Q6XCG6 107 aa7.79□□□□□ -1.16
SHKBP1-205ENST00000594973 M0R2T5 61 aa7.67□□□□□ -1.18
SHKBP1-205ENST00000594973 MT1HP80294 61 aa7.62□□□□□ -1.19
SHKBP1-205ENST00000594973 CAMK2N1Q7Z7J9 78 aa7.48□□□□□ -1.21
SHKBP1-205ENST00000594973 SPRR5A0A1B0GTR4 108 aa7.47□□□□□ -1.21
SHKBP1-205ENST00000594973 KRTAP23-1A1A580 65 aa7.43□□□□□ -1.22
SHKBP1-205ENST00000594973 MT2AP02795 61 aa7.4□□□□□ -1.22
SHKBP1-205ENST00000594973 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
SHKBP1-205ENST00000594973 MT1FP04733 61 aa7.4□□□□□ -1.23
SHKBP1-205ENST00000594973 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
SHKBP1-205ENST00000594973 SPRR2GQ9BYE4 73 aa7.38□□□□□ -1.23
SHKBP1-205ENST00000594973 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
SHKBP1-205ENST00000594973 TNP1P09430 55 aa7.27□□□□□ -1.25
SHKBP1-205ENST00000594973 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
SHKBP1-205ENST00000594973 INE1O15225 51 aa7.11□□□□□ -1.27
SHKBP1-205ENST00000594973 KRTAP19-8Q3LI54 63 aa7.1□□□□□ -1.27
SHKBP1-205ENST00000594973 KRTAP9-3Q9BYQ3 159 aa7.09□□□□□ -1.28
SHKBP1-205ENST00000594973 MT1BP07438 61 aa7.04□□□□□ -1.28
SHKBP1-205ENST00000594973 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
SHKBP1-205ENST00000594973 KRTAP10-5P60370 271 aa6.92□□□□□ -1.3
SHKBP1-205ENST00000594973 MT1XP80297 61 aa6.91□□□□□ -1.3
SHKBP1-205ENST00000594973 USH2AO75445 5202 aa6.91□□□□□ -1.3
SHKBP1-205ENST00000594973 LCE2BO14633 110 aa6.87□□□□□ -1.31
SHKBP1-205ENST00000594973 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
SHKBP1-205ENST00000594973 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.34
SHKBP1-205ENST00000594973 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
SHKBP1-205ENST00000594973 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
SHKBP1-205ENST00000594973 KMT2DO14686 5537 aa6.57□□□□□ -1.36
SHKBP1-205ENST00000594973 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
SHKBP1-205ENST00000594973 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
SHKBP1-205ENST00000594973 SSPOA2VEC9 5147 aa6.48□□□□□ -1.37
SHKBP1-205ENST00000594973 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
SHKBP1-205ENST00000594973 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
SHKBP1-205ENST00000594973 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
SHKBP1-205ENST00000594973 LCE2DQ5TA82 110 aaPredicted RBP6.35□□□□□ -1.39
SHKBP1-205ENST00000594973 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
SHKBP1-205ENST00000594973 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.41
SHKBP1-205ENST00000594973 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
SHKBP1-205ENST00000594973 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
SHKBP1-205ENST00000594973 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
SHKBP1-205ENST00000594973 MT1EP04732 61 aa6.02□□□□□ -1.45
SHKBP1-205ENST00000594973 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
SHKBP1-205ENST00000594973 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
SHKBP1-205ENST00000594973 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms