RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 CSAG1Q6PB30 78 aa4.68□□□□□ -1.66
TPM4-216ENST00000592822 SERP2Q8N6R1 65 aa4.67□□□□□ -1.66
TPM4-216ENST00000592822 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
TPM4-216ENST00000592822 SNURFQ9Y675 71 aa4.64□□□□□ -1.67
TPM4-216ENST00000592822 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
TPM4-216ENST00000592822 C20orf197Q8N268 126 aa4.62□□□□□ -1.67
TPM4-216ENST00000592822 NDUFC1O43677 76 aa4.61□□□□□ -1.67
TPM4-216ENST00000592822 FSIP2Q5CZC0 6907 aa4.61□□□□□ -1.67
TPM4-216ENST00000592822 COX7CP15954 63 aa4.58□□□□□ -1.68
TPM4-216ENST00000592822 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
TPM4-216ENST00000592822 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
TPM4-216ENST00000592822 USH2AO75445 5202 aa4.56□□□□□ -1.68
TPM4-216ENST00000592822 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
TPM4-216ENST00000592822 ACYP2P14621 99 aa4.55□□□□□ -1.68
TPM4-216ENST00000592822 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
TPM4-216ENST00000592822 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
TPM4-216ENST00000592822 H3BS24 57 aa4.53□□□□□ -1.68
TPM4-216ENST00000592822 H0YAA0 97 aa4.52□□□□□ -1.69
TPM4-216ENST00000592822 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
TPM4-216ENST00000592822 ANAPC13Q9BS18 74 aa4.52□□□□□ -1.69
TPM4-216ENST00000592822 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
TPM4-216ENST00000592822 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
TPM4-216ENST00000592822 ADM2Q7Z4H4 148 aa4.49□□□□□ -1.69
TPM4-216ENST00000592822 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
TPM4-216ENST00000592822 H7BZZ5 65 aa4.47□□□□□ -1.69
TPM4-216ENST00000592822 CRIPTQ9P021 101 aa4.46□□□□□ -1.7
TPM4-216ENST00000592822 CHKB-CPT1BH3BT56 60 aa4.45□□□□□ -1.7
TPM4-216ENST00000592822 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
TPM4-216ENST00000592822 CCDC179H3BU77 68 aa4.43□□□□□ -1.7
TPM4-216ENST00000592822 P0C880 135 aa4.43□□□□□ -1.7
TPM4-216ENST00000592822 KRTAP19-8Q3LI54 63 aa4.43□□□□□ -1.7
TPM4-216ENST00000592822 MT1BP07438 61 aa4.41□□□□□ -1.7
TPM4-216ENST00000592822 COA5Q86WW8 74 aa4.41□□□□□ -1.7
TPM4-216ENST00000592822 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
TPM4-216ENST00000592822 Q5VV11 94 aa4.39□□□□□ -1.71
TPM4-216ENST00000592822 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
TPM4-216ENST00000592822 R4GN34 69 aa4.34□□□□□ -1.71
TPM4-216ENST00000592822 M0QZ58 72 aa4.33□□□□□ -1.72
TPM4-216ENST00000592822 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
TPM4-216ENST00000592822 TMEM258P61165 79 aa4.26□□□□□ -1.73
TPM4-216ENST00000592822 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
TPM4-216ENST00000592822 A6NN06 94 aa4.25□□□□□ -1.73
TPM4-216ENST00000592822 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
TPM4-216ENST00000592822 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
TPM4-216ENST00000592822 LINC01554Q52M75 96 aa4.25□□□□□ -1.73
TPM4-216ENST00000592822 SEC61GP60059 68 aa4.23□□□□□ -1.73
TPM4-216ENST00000592822 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
TPM4-216ENST00000592822 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
TPM4-216ENST00000592822 SERP1Q9Y6X1 66 aa4.22□□□□□ -1.73
TPM4-216ENST00000592822 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
TPM4-216ENST00000592822 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
TPM4-216ENST00000592822 MT1XP80297 61 aa4.18□□□□□ -1.74
TPM4-216ENST00000592822 A0A1B0GU69 56 aa4.17□□□□□ -1.74
TPM4-216ENST00000592822 A0A1B0GU33 70 aa4.16□□□□□ -1.74
TPM4-216ENST00000592822 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
TPM4-216ENST00000592822 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
TPM4-216ENST00000592822 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
TPM4-216ENST00000592822 PRO2289Q9P1D8 64 aa4.13□□□□□ -1.75
TPM4-216ENST00000592822 LINC01558Q9Y6Z2 57 aa4.12□□□□□ -1.75
TPM4-216ENST00000592822 PCP4P48539 62 aa4.11□□□□□ -1.75
TPM4-216ENST00000592822 A0A0D9SG42 100 aa4.09□□□□□ -1.75
TPM4-216ENST00000592822 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
TPM4-216ENST00000592822 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
TPM4-216ENST00000592822 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
TPM4-216ENST00000592822 SMIM26A0A096LP01 95 aa4.03□□□□□ -1.76
TPM4-216ENST00000592822 A8MU10 97 aa4.03□□□□□ -1.76
TPM4-216ENST00000592822 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
TPM4-216ENST00000592822 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
TPM4-216ENST00000592822 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
TPM4-216ENST00000592822 CAMK2N1Q7Z7J9 78 aa4.02□□□□□ -1.77
TPM4-216ENST00000592822 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
TPM4-216ENST00000592822 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
TPM4-216ENST00000592822 Q1T7F1 81 aa3.98□□□□□ -1.77
TPM4-216ENST00000592822 V9GYY9 64 aa3.98□□□□□ -1.77
TPM4-216ENST00000592822 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
TPM4-216ENST00000592822 UQCR11O14957 56 aa3.96□□□□□ -1.78
TPM4-216ENST00000592822 RPS28P62857 69 aaKnown RBP3.96□□□□□ -1.78
TPM4-216ENST00000592822 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
TPM4-216ENST00000592822 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
TPM4-216ENST00000592822 PSPHP1O15172 72 aa3.95□□□□□ -1.78
TPM4-216ENST00000592822 KMT2DO14686 5537 aa3.94□□□□□ -1.78
TPM4-216ENST00000592822 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
TPM4-216ENST00000592822 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
TPM4-216ENST00000592822 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
TPM4-216ENST00000592822 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
TPM4-216ENST00000592822 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
TPM4-216ENST00000592822 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
TPM4-216ENST00000592822 NEBP20929 6669 aa3.85□□□□□ -1.79
TPM4-216ENST00000592822 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
TPM4-216ENST00000592822 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.79
TPM4-216ENST00000592822 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
TPM4-216ENST00000592822 A6NED7 52 aa3.81□□□□□ -1.8
TPM4-216ENST00000592822 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
TPM4-216ENST00000592822 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
TPM4-216ENST00000592822 K7ERS5 55 aa3.76□□□□□ -1.81
TPM4-216ENST00000592822 TNP1P09430 55 aa3.76□□□□□ -1.81
TPM4-216ENST00000592822 SPRR2EP22531 72 aa3.76□□□□□ -1.81
TPM4-216ENST00000592822 SPRR2BP35325 72 aa3.76□□□□□ -1.81
TPM4-216ENST00000592822 SPRR2AP35326 72 aa3.76□□□□□ -1.81
TPM4-216ENST00000592822 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms