RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 MP68P56378 58 aa6.66□□□□□ -1.34
DDX39A-217ENST00000592391 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
DDX39A-217ENST00000592391 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
DDX39A-217ENST00000592391 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
DDX39A-217ENST00000592391 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
DDX39A-217ENST00000592391 MT-ATP8P03928 68 aa6.62□□□□□ -1.35
DDX39A-217ENST00000592391 A8MUN3 132 aa6.61□□□□□ -1.35
DDX39A-217ENST00000592391 H3BPC8 53 aa6.58□□□□□ -1.36
DDX39A-217ENST00000592391 NDUFC1O43677 76 aa6.57□□□□□ -1.36
DDX39A-217ENST00000592391 IMUPQ9GZP8 106 aa6.57□□□□□ -1.36
DDX39A-217ENST00000592391 SPRR2GQ9BYE4 73 aa6.55□□□□□ -1.36
DDX39A-217ENST00000592391 SVIPQ8NHG7 77 aa6.54□□□□□ -1.36
DDX39A-217ENST00000592391 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
DDX39A-217ENST00000592391 H0YAA0 97 aa6.5□□□□□ -1.37
DDX39A-217ENST00000592391 KRTAP19-8Q3LI54 63 aa6.49□□□□□ -1.37
DDX39A-217ENST00000592391 Q5VV11 94 aa6.49□□□□□ -1.37
DDX39A-217ENST00000592391 ANAPC13Q9BS18 74 aa6.49□□□□□ -1.37
DDX39A-217ENST00000592391 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
DDX39A-217ENST00000592391 MT1BP07438 61 aa6.48□□□□□ -1.37
DDX39A-217ENST00000592391 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
DDX39A-217ENST00000592391 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
DDX39A-217ENST00000592391 SMIM20Q8N5G0 67 aa6.45□□□□□ -1.38
DDX39A-217ENST00000592391 TRAV7A0A075B6U4 112 aa6.44□□□□□ -1.38
DDX39A-217ENST00000592391 ADM2Q7Z4H4 148 aa6.42□□□□□ -1.38
DDX39A-217ENST00000592391 A6NN06 94 aa6.37□□□□□ -1.39
DDX39A-217ENST00000592391 ACYP2P14621 99 aa6.32□□□□□ -1.4
DDX39A-217ENST00000592391 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
DDX39A-217ENST00000592391 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
DDX39A-217ENST00000592391 KRTAP10-5P60370 271 aa6.31□□□□□ -1.4
DDX39A-217ENST00000592391 P0C880 135 aa6.29□□□□□ -1.4
DDX39A-217ENST00000592391 C20orf197Q8N268 126 aa6.29□□□□□ -1.4
DDX39A-217ENST00000592391 SNURFQ9Y675 71 aa6.29□□□□□ -1.4
DDX39A-217ENST00000592391 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
DDX39A-217ENST00000592391 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
DDX39A-217ENST00000592391 R4GN34 69 aa6.25□□□□□ -1.41
DDX39A-217ENST00000592391 KRTAP6-3Q3LI67 103 aa6.23□□□□□ -1.41
DDX39A-217ENST00000592391 SPTSSBQ8NFR3 76 aa6.22□□□□□ -1.41
DDX39A-217ENST00000592391 COX7CP15954 63 aa6.21□□□□□ -1.42
DDX39A-217ENST00000592391 SPANXA2-OT1Q8N9U9 137 aa6.21□□□□□ -1.42
DDX39A-217ENST00000592391 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
DDX39A-217ENST00000592391 M0QZ58 72 aa6.2□□□□□ -1.42
DDX39A-217ENST00000592391 RPS28P62857 69 aaKnown RBP6.19□□□□□ -1.42
DDX39A-217ENST00000592391 PLAC4Q8WY50 150 aa6.16□□□□□ -1.42
DDX39A-217ENST00000592391 TMEM258P61165 79 aa6.14□□□□□ -1.43
DDX39A-217ENST00000592391 PRO2289Q9P1D8 64 aa6.12□□□□□ -1.43
DDX39A-217ENST00000592391 MT1XP80297 61 aa6.1□□□□□ -1.43
DDX39A-217ENST00000592391 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
DDX39A-217ENST00000592391 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.43
DDX39A-217ENST00000592391 H7BZZ5 65 aa6.03□□□□□ -1.44
DDX39A-217ENST00000592391 COA5Q86WW8 74 aa6.02□□□□□ -1.45
DDX39A-217ENST00000592391 KRTAP5-9P26371 169 aa6□□□□□ -1.45
DDX39A-217ENST00000592391 MUC12Q9UKN1 5478 aa5.97□□□□□ -1.45
DDX39A-217ENST00000592391 ATP5EP56381 51 aaPredicted RBP5.96□□□□□ -1.46
DDX39A-217ENST00000592391 SERP1Q9Y6X1 66 aa5.96□□□□□ -1.46
DDX39A-217ENST00000592391 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
DDX39A-217ENST00000592391 NEBP20929 6669 aa5.93□□□□□ -1.46
DDX39A-217ENST00000592391 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
DDX39A-217ENST00000592391 KMT2DO14686 5537 aa5.89□□□□□ -1.47
DDX39A-217ENST00000592391 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
DDX39A-217ENST00000592391 SEC61GP60059 68 aa5.88□□□□□ -1.47
DDX39A-217ENST00000592391 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
DDX39A-217ENST00000592391 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
DDX39A-217ENST00000592391 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
DDX39A-217ENST00000592391 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
DDX39A-217ENST00000592391 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
DDX39A-217ENST00000592391 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
DDX39A-217ENST00000592391 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
DDX39A-217ENST00000592391 PRO0628Q9UI54 55 aa5.79□□□□□ -1.48
DDX39A-217ENST00000592391 A0A1B0GU33 70 aa5.77□□□□□ -1.49
DDX39A-217ENST00000592391 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
DDX39A-217ENST00000592391 A0A0D9SG42 100 aa5.74□□□□□ -1.49
DDX39A-217ENST00000592391 SPATA8Q6RVD6 105 aa5.74□□□□□ -1.49
DDX39A-217ENST00000592391 SPRR2EP22531 72 aa5.72□□□□□ -1.49
DDX39A-217ENST00000592391 SPRR2BP35325 72 aa5.72□□□□□ -1.49
DDX39A-217ENST00000592391 SPRR2AP35326 72 aa5.72□□□□□ -1.49
DDX39A-217ENST00000592391 A0A1B0GU69 56 aa5.71□□□□□ -1.5
DDX39A-217ENST00000592391 KRTAP20-1Q3LI63 56 aa5.71□□□□□ -1.5
DDX39A-217ENST00000592391 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
DDX39A-217ENST00000592391 SPINT4Q6UDR6 99 aa5.65□□□□□ -1.5
DDX39A-217ENST00000592391 V9GYY9 64 aa5.64□□□□□ -1.51
DDX39A-217ENST00000592391 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
DDX39A-217ENST00000592391 Q1T7F1 81 aa5.63□□□□□ -1.51
DDX39A-217ENST00000592391 BRK1Q8WUW1 75 aa5.61□□□□□ -1.51
DDX39A-217ENST00000592391 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
DDX39A-217ENST00000592391 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
DDX39A-217ENST00000592391 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
DDX39A-217ENST00000592391 A8MU10 97 aa5.55□□□□□ -1.52
DDX39A-217ENST00000592391 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
DDX39A-217ENST00000592391 SPRR2DP22532 72 aa5.53□□□□□ -1.52
DDX39A-217ENST00000592391 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
DDX39A-217ENST00000592391 PMAIP1Q13794 54 aa5.44□□□□□ -1.54
DDX39A-217ENST00000592391 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
DDX39A-217ENST00000592391 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
DDX39A-217ENST00000592391 PSPHP1O15172 72 aa5.42□□□□□ -1.54
DDX39A-217ENST00000592391 MT1EP04732 61 aa5.41□□□□□ -1.54
DDX39A-217ENST00000592391 UQCR11O14957 56 aa5.39□□□□□ -1.55
DDX39A-217ENST00000592391 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
DDX39A-217ENST00000592391 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
DDX39A-217ENST00000592391 TNP1P09430 55 aa5.35□□□□□ -1.55
DDX39A-217ENST00000592391 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms