RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
BRCA1-227ENST00000591849 LINC00208Q96KT6 92 aa4.75□□□□□ -1.65
BRCA1-227ENST00000591849 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-227ENST00000591849 PCP4P48539 62 aa4.74□□□□□ -1.65
BRCA1-227ENST00000591849 LCA10Q71F78 164 aa4.73□□□□□ -1.65
BRCA1-227ENST00000591849 OCR1Q9BZK8 76 aa4.73□□□□□ -1.65
BRCA1-227ENST00000591849 LCE2BO14633 110 aa4.72□□□□□ -1.65
BRCA1-227ENST00000591849 COX7CP15954 63 aa4.72□□□□□ -1.65
BRCA1-227ENST00000591849 H3BPC8 53 aa4.69□□□□□ -1.66
BRCA1-227ENST00000591849 KRTAP19-1Q8IUB9 90 aa4.68□□□□□ -1.66
BRCA1-227ENST00000591849 NDUFC1O43677 76 aa4.67□□□□□ -1.66
BRCA1-227ENST00000591849 A8MUN3 132 aa4.66□□□□□ -1.66
BRCA1-227ENST00000591849 KLKP1Q107X0 134 aa4.66□□□□□ -1.66
BRCA1-227ENST00000591849 C20orf197Q8N268 126 aa4.63□□□□□ -1.67
BRCA1-227ENST00000591849 CCDC179H3BU77 68 aa4.62□□□□□ -1.67
BRCA1-227ENST00000591849 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
BRCA1-227ENST00000591849 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
BRCA1-227ENST00000591849 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
BRCA1-227ENST00000591849 SNURFQ9Y675 71 aa4.57□□□□□ -1.68
BRCA1-227ENST00000591849 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
BRCA1-227ENST00000591849 ATP5EP56381 51 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-227ENST00000591849 TMEM258P61165 79 aa4.56□□□□□ -1.68
BRCA1-227ENST00000591849 CRIPTQ9P021 101 aa4.55□□□□□ -1.68
BRCA1-227ENST00000591849 H7BZZ5 65 aa4.54□□□□□ -1.68
BRCA1-227ENST00000591849 Q5VV11 94 aa4.54□□□□□ -1.68
BRCA1-227ENST00000591849 ADM2Q7Z4H4 148 aa4.53□□□□□ -1.68
BRCA1-227ENST00000591849 DMAC1Q96GE9 116 aa4.53□□□□□ -1.68
BRCA1-227ENST00000591849 H0YAA0 97 aa4.52□□□□□ -1.69
BRCA1-227ENST00000591849 SPANXA2-OT1Q8N9U9 137 aa4.52□□□□□ -1.69
BRCA1-227ENST00000591849 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
BRCA1-227ENST00000591849 ACYP2P14621 99 aa4.5□□□□□ -1.69
BRCA1-227ENST00000591849 CYSTM1Q9H1C7 97 aa4.49□□□□□ -1.69
BRCA1-227ENST00000591849 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
BRCA1-227ENST00000591849 CHKB-CPT1BH3BT56 60 aa4.47□□□□□ -1.69
BRCA1-227ENST00000591849 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
BRCA1-227ENST00000591849 SPTSSBQ8NFR3 76 aa4.47□□□□□ -1.69
BRCA1-227ENST00000591849 A6NN06 94 aa4.45□□□□□ -1.7
BRCA1-227ENST00000591849 MT1BP07438 61 aa4.45□□□□□ -1.7
BRCA1-227ENST00000591849 R4GN34 69 aa4.42□□□□□ -1.7
BRCA1-227ENST00000591849 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.71
BRCA1-227ENST00000591849 M0QZ58 72 aa4.39□□□□□ -1.71
BRCA1-227ENST00000591849 P0C880 135 aa4.39□□□□□ -1.71
BRCA1-227ENST00000591849 RPS28P62857 69 aaKnown RBP4.39□□□□□ -1.71
BRCA1-227ENST00000591849 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
BRCA1-227ENST00000591849 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
BRCA1-227ENST00000591849 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
BRCA1-227ENST00000591849 KRTAP3-2Q9BYR7 98 aa4.34□□□□□ -1.71
BRCA1-227ENST00000591849 COA5Q86WW8 74 aa4.33□□□□□ -1.72
BRCA1-227ENST00000591849 NEBP20929 6669 aa4.31□□□□□ -1.72
BRCA1-227ENST00000591849 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
BRCA1-227ENST00000591849 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
BRCA1-227ENST00000591849 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
BRCA1-227ENST00000591849 V9GYY9 64 aa4.27□□□□□ -1.73
BRCA1-227ENST00000591849 SEC61GP60059 68 aa4.26□□□□□ -1.73
BRCA1-227ENST00000591849 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
BRCA1-227ENST00000591849 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
BRCA1-227ENST00000591849 MT1XP80297 61 aa4.2□□□□□ -1.74
BRCA1-227ENST00000591849 Q1T7F1 81 aa4.2□□□□□ -1.74
BRCA1-227ENST00000591849 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
BRCA1-227ENST00000591849 KMT2DO14686 5537 aa4.17□□□□□ -1.74
BRCA1-227ENST00000591849 LINC01558Q9Y6Z2 57 aa4.17□□□□□ -1.74
BRCA1-227ENST00000591849 MDN1Q9NU22 5596 aa4.15□□□□□ -1.74
BRCA1-227ENST00000591849 A0A1B0GU69 56 aa4.13□□□□□ -1.75
BRCA1-227ENST00000591849 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
BRCA1-227ENST00000591849 A0A1B0GU33 70 aa4.11□□□□□ -1.75
BRCA1-227ENST00000591849 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
BRCA1-227ENST00000591849 A0A0D9SG42 100 aa4.1□□□□□ -1.75
BRCA1-227ENST00000591849 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
BRCA1-227ENST00000591849 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
BRCA1-227ENST00000591849 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
BRCA1-227ENST00000591849 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
BRCA1-227ENST00000591849 PSPHP1O15172 72 aa4.07□□□□□ -1.76
BRCA1-227ENST00000591849 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
BRCA1-227ENST00000591849 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
BRCA1-227ENST00000591849 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
BRCA1-227ENST00000591849 UQCR11O14957 56 aa4.02□□□□□ -1.77
BRCA1-227ENST00000591849 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-227ENST00000591849 SPRR2EP22531 72 aa4.01□□□□□ -1.77
BRCA1-227ENST00000591849 SPRR2BP35325 72 aa4.01□□□□□ -1.77
BRCA1-227ENST00000591849 SPRR2AP35326 72 aa4.01□□□□□ -1.77
BRCA1-227ENST00000591849 KRTAP4-8A0A0G2JLE6 195 aa4□□□□□ -1.77
BRCA1-227ENST00000591849 A6NED7 52 aa4□□□□□ -1.77
BRCA1-227ENST00000591849 KRTAP4-8Q9BYQ9 185 aa4□□□□□ -1.77
BRCA1-227ENST00000591849 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
BRCA1-227ENST00000591849 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
BRCA1-227ENST00000591849 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
BRCA1-227ENST00000591849 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
BRCA1-227ENST00000591849 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
BRCA1-227ENST00000591849 A8MU10 97 aa3.93□□□□□ -1.78
BRCA1-227ENST00000591849 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
BRCA1-227ENST00000591849 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
BRCA1-227ENST00000591849 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
BRCA1-227ENST00000591849 SPRR2DP22532 72 aa3.89□□□□□ -1.79
BRCA1-227ENST00000591849 K7ERS5 55 aa3.86□□□□□ -1.79
BRCA1-227ENST00000591849 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
BRCA1-227ENST00000591849 TNP1P09430 55 aa3.8□□□□□ -1.8
BRCA1-227ENST00000591849 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
BRCA1-227ENST00000591849 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
BRCA1-227ENST00000591849 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
BRCA1-227ENST00000591849 MT1EP04732 61 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms