RNA–Protein interactions for RNA: ENST00000591472.6

SEPT9-238, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-238	ENST00000591472	SPANXA2-OT1	Q8N9U9	137 aa		5.74	□□□□□ -1.49
SEPT9-238	ENST00000591472	KRTAP9-8	Q9BYQ0	159 aa		5.74	□□□□□ -1.49
SEPT9-238	ENST00000591472	KRTAP3-3	Q9BYR6	98 aa		5.74	□□□□□ -1.49
SEPT9-238	ENST00000591472	CSAG1	Q6PB30	78 aa		5.73	□□□□□ -1.49
SEPT9-238	ENST00000591472	MT2A	P02795	61 aa		5.7	□□□□□ -1.5
SEPT9-238	ENST00000591472	NDUFC1	O43677	76 aa		5.69	□□□□□ -1.5
SEPT9-238	ENST00000591472	ACYP2	P14621	99 aa		5.68	□□□□□ -1.5
SEPT9-238	ENST00000591472	MT1F	P04733	61 aa		5.65	□□□□□ -1.5
SEPT9-238	ENST00000591472	KRTAP10-10	P60014	251 aa		5.64	□□□□□ -1.51
SEPT9-238	ENST00000591472	LCE2D	Q5TA82	110 aa	Predicted RBP	5.64	□□□□□ -1.51
SEPT9-238	ENST00000591472	PCP4	P48539	62 aa		5.6	□□□□□ -1.51
SEPT9-238	ENST00000591472	KRTAP9-2	Q9BYQ4	174 aa		5.59	□□□□□ -1.51
SEPT9-238	ENST00000591472	CHKB-CPT1B	H3BT56	60 aa		5.57	□□□□□ -1.52
SEPT9-238	ENST00000591472		H0YAA0	97 aa		5.56	□□□□□ -1.52
SEPT9-238	ENST00000591472	SPTSSB	Q8NFR3	76 aa		5.56	□□□□□ -1.52
SEPT9-238	ENST00000591472	KRTAP9-3	Q9BYQ3	159 aa		5.56	□□□□□ -1.52
SEPT9-238	ENST00000591472	TMEM258	P61165	79 aa		5.55	□□□□□ -1.52
SEPT9-238	ENST00000591472	COA5	Q86WW8	74 aa		5.54	□□□□□ -1.52
SEPT9-238	ENST00000591472	ATP5E	P56381	51 aa	Predicted RBP	5.51	□□□□□ -1.53
SEPT9-238	ENST00000591472	ADM2	Q7Z4H4	148 aa		5.49	□□□□□ -1.53
SEPT9-238	ENST00000591472	KRTAP3-2	Q9BYR7	98 aa		5.48	□□□□□ -1.53
SEPT9-238	ENST00000591472	CRIPT	Q9P021	101 aa		5.46	□□□□□ -1.54
SEPT9-238	ENST00000591472	LCE2B	O14633	110 aa		5.45	□□□□□ -1.54
SEPT9-238	ENST00000591472	KRTAP19-1	Q8IUB9	90 aa		5.42	□□□□□ -1.54
SEPT9-238	ENST00000591472		P0C880	135 aa		5.41	□□□□□ -1.54
SEPT9-238	ENST00000591472	SPRR2G	Q9BYE4	73 aa		5.41	□□□□□ -1.54
SEPT9-238	ENST00000591472	KRTAP9-6	A0A140TA67	174 aa		5.38	□□□□□ -1.55
SEPT9-238	ENST00000591472	FSIP2	Q5CZC0	6907 aa		5.38	□□□□□ -1.55
SEPT9-238	ENST00000591472	USH2A	O75445	5202 aa		5.38	□□□□□ -1.55
SEPT9-238	ENST00000591472	SERP1	Q9Y6X1	66 aa		5.37	□□□□□ -1.55
SEPT9-238	ENST00000591472	CRCT1	Q9UGL9	99 aa		5.35	□□□□□ -1.55
SEPT9-238	ENST00000591472		R4GN34	69 aa		5.34	□□□□□ -1.55
SEPT9-238	ENST00000591472	KRTAP19-8	Q3LI54	63 aa		5.32	□□□□□ -1.56
SEPT9-238	ENST00000591472		M0QZ58	72 aa		5.31	□□□□□ -1.56
SEPT9-238	ENST00000591472	SEC61G	P60059	68 aa		5.31	□□□□□ -1.56
SEPT9-238	ENST00000591472		Q5VV11	94 aa		5.3	□□□□□ -1.56
SEPT9-238	ENST00000591472	RPS28	P62857	69 aa	Known RBP	5.28	□□□□□ -1.56
SEPT9-238	ENST00000591472	MT1B	P07438	61 aa		5.27	□□□□□ -1.57
SEPT9-238	ENST00000591472	LINC01558	Q9Y6Z2	57 aa		5.27	□□□□□ -1.57
SEPT9-238	ENST00000591472	SSPO	A2VEC9	5147 aa		5.26	□□□□□ -1.57
SEPT9-238	ENST00000591472	KRTAP13-4	Q3LI77	160 aa		5.25	□□□□□ -1.57
SEPT9-238	ENST00000591472		A0A1B0GU69	56 aa		5.23	□□□□□ -1.57
SEPT9-238	ENST00000591472	KRTAP19-6	Q3LI70	58 aa		5.22	□□□□□ -1.57
SEPT9-238	ENST00000591472	LINC01554	Q52M75	96 aa		5.2	□□□□□ -1.58
SEPT9-238	ENST00000591472		Q1T7F1	81 aa		5.19	□□□□□ -1.58
SEPT9-238	ENST00000591472	PRR15L	Q9BU68	103 aa		5.19	□□□□□ -1.58
SEPT9-238	ENST00000591472	SMIM26	A0A096LP01	95 aa		5.18	□□□□□ -1.58
SEPT9-238	ENST00000591472		A0A1B0GU33	70 aa		5.18	□□□□□ -1.58
SEPT9-238	ENST00000591472	PLAC4	Q8WY50	150 aa		5.17	□□□□□ -1.58
SEPT9-238	ENST00000591472		A6NN06	94 aa		5.12	□□□□□ -1.59
SEPT9-238	ENST00000591472	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.12	□□□□□ -1.59
SEPT9-238	ENST00000591472	SPATA8	Q6RVD6	105 aa		5.11	□□□□□ -1.59
SEPT9-238	ENST00000591472		V9GYY9	64 aa		5.11	□□□□□ -1.59
SEPT9-238	ENST00000591472	KRTAP10-5	P60370	271 aa		5.09	□□□□□ -1.59
SEPT9-238	ENST00000591472		A0A0D9SG42	100 aa		5.06	□□□□□ -1.6
SEPT9-238	ENST00000591472	PSPHP1	O15172	72 aa		5.05	□□□□□ -1.6
SEPT9-238	ENST00000591472	PRO2289	Q9P1D8	64 aa		5.04	□□□□□ -1.6
SEPT9-238	ENST00000591472	MT1X	P80297	61 aa		5.03	□□□□□ -1.6
SEPT9-238	ENST00000591472		A8MU10	97 aa		5.01	□□□□□ -1.61
SEPT9-238	ENST00000591472	UQCR11	O14957	56 aa		5.01	□□□□□ -1.61
SEPT9-238	ENST00000591472	KRTAP12-1	P59990	96 aa		4.99	□□□□□ -1.61
SEPT9-238	ENST00000591472	SPINT4	Q6UDR6	99 aa		4.97	□□□□□ -1.61
SEPT9-238	ENST00000591472	CAMK2N1	Q7Z7J9	78 aa		4.96	□□□□□ -1.62
SEPT9-238	ENST00000591472	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.95	□□□□□ -1.62
SEPT9-238	ENST00000591472	KRTAP12-2	P59991	146 aa		4.95	□□□□□ -1.62
SEPT9-238	ENST00000591472	MIR22HG	Q0VDD5	57 aa		4.92	□□□□□ -1.62
SEPT9-238	ENST00000591472	MACF1	Q9UPN3	7388 aa	Known RBP	4.88	□□□□□ -1.63
SEPT9-238	ENST00000591472		A6NED7	52 aa		4.86	□□□□□ -1.63
SEPT9-238	ENST00000591472	KRTAP9-7	A8MTY7	169 aa		4.85	□□□□□ -1.63
SEPT9-238	ENST00000591472	CDC42SE1	Q9NRR8	79 aa		4.8	□□□□□ -1.64
SEPT9-238	ENST00000591472	KRTAP10-7	P60409	375 aa	Predicted RBP	4.79	□□□□□ -1.64
SEPT9-238	ENST00000591472		K7ERS5	55 aa		4.78	□□□□□ -1.64
SEPT9-238	ENST00000591472	KRTAP10-12	P60413	245 aa		4.78	□□□□□ -1.64
SEPT9-238	ENST00000591472	SYNE2	Q8WXH0	6885 aa	Known RBP	4.78	□□□□□ -1.64
SEPT9-238	ENST00000591472	C10orf95	Q9H7T3	257 aa		4.76	□□□□□ -1.65
SEPT9-238	ENST00000591472	KRTAP6-3	Q3LI67	103 aa		4.75	□□□□□ -1.65
SEPT9-238	ENST00000591472	KMT2D	O14686	5537 aa		4.72	□□□□□ -1.65
SEPT9-238	ENST00000591472	KRTAP8-1	Q8IUC2	63 aa		4.69	□□□□□ -1.66
SEPT9-238	ENST00000591472	KRTAP4-8	A0A0G2JLE6	195 aa		4.68	□□□□□ -1.66
SEPT9-238	ENST00000591472	KRTAP4-8	Q9BYQ9	185 aa		4.68	□□□□□ -1.66
SEPT9-238	ENST00000591472	KRTAP5-9	P26371	169 aa		4.67	□□□□□ -1.66
SEPT9-238	ENST00000591472	TNP1	P09430	55 aa		4.65	□□□□□ -1.67
SEPT9-238	ENST00000591472	BRK1	Q8WUW1	75 aa		4.6	□□□□□ -1.67
SEPT9-238	ENST00000591472	SPRR2F	Q96RM1	72 aa		4.59	□□□□□ -1.67
SEPT9-238	ENST00000591472	KRTAP25-1	Q3LHN0	102 aa		4.56	□□□□□ -1.68
SEPT9-238	ENST00000591472	ROMO1	P60602	79 aa		4.51	□□□□□ -1.69
SEPT9-238	ENST00000591472	LCE3A	Q5TA76	89 aa		4.51	□□□□□ -1.69
SEPT9-238	ENST00000591472	MUC12	Q9UKN1	5478 aa		4.49	□□□□□ -1.69
SEPT9-238	ENST00000591472	KRTAP19-7	Q3SYF9	63 aa		4.48	□□□□□ -1.69
SEPT9-238	ENST00000591472	MDN1	Q9NU22	5596 aa		4.47	□□□□□ -1.69
SEPT9-238	ENST00000591472	SPRR2E	P22531	72 aa		4.46	□□□□□ -1.7
SEPT9-238	ENST00000591472	SPRR2B	P35325	72 aa		4.46	□□□□□ -1.7
SEPT9-238	ENST00000591472	SPRR2A	P35326	72 aa		4.46	□□□□□ -1.7
SEPT9-238	ENST00000591472	KRTAP19-5	Q3LI72	72 aa		4.46	□□□□□ -1.7
SEPT9-238	ENST00000591472	NEB	P20929	6669 aa		4.46	□□□□□ -1.7
SEPT9-238	ENST00000591472	LCE1A	Q5T7P2	110 aa		4.44	□□□□□ -1.7
SEPT9-238	ENST00000591472	MT1E	P04732	61 aa		4.43	□□□□□ -1.7
SEPT9-238	ENST00000591472	PRO0628	Q9UI54	55 aa		4.42	□□□□□ -1.7
SEPT9-238	ENST00000591472	KRTAP23-1	A1A580	65 aa		4.41	□□□□□ -1.7
SEPT9-238	ENST00000591472	KRTAP12-3	P60328	96 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 81 ms