RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 LPAP08519 4548 aa10.55□□□□□ -0.72
SPHK1-207ENST00000590959 HMCN2Q8NDA2 5059 aa10.55□□□□□ -0.72
SPHK1-207ENST00000590959 A8MUU9 505 aa10.55□□□□□ -0.72
SPHK1-207ENST00000590959 IGKV2D-30A0A075B6S6 120 aa10.53□□□□□ -0.72
SPHK1-207ENST00000590959 SPATA8Q6RVD6 105 aa10.53□□□□□ -0.72
SPHK1-207ENST00000590959 UQCR11O14957 56 aa10.49□□□□□ -0.73
SPHK1-207ENST00000590959 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
SPHK1-207ENST00000590959 MIR22HGQ0VDD5 57 aa10.43□□□□□ -0.74
SPHK1-207ENST00000590959 LRP2P98164 4655 aa10.43□□□□□ -0.74
SPHK1-207ENST00000590959 XP32Q5T750 250 aa10.42□□□□□ -0.74
SPHK1-207ENST00000590959 TPRXLQ17RH7 258 aa10.41□□□□□ -0.74
SPHK1-207ENST00000590959 RPL37P61927 97 aaKnown RBP10.37□□□□□ -0.75
SPHK1-207ENST00000590959 UBR4Q5T4S7 5183 aa10.19□□□□□ -0.78
SPHK1-207ENST00000590959 PRAC1Q96KF2 57 aa10.09□□□□□ -0.79
SPHK1-207ENST00000590959 SEC61BP60468 96 aaKnown RBP10.06□□□□□ -0.8
SPHK1-207ENST00000590959 MUC17Q685J3 4493 aa10.05□□□□□ -0.8
SPHK1-207ENST00000590959 MUC2Q02817 5179 aa10.05□□□□□ -0.8
SPHK1-207ENST00000590959 ADM2Q7Z4H4 148 aa10.02□□□□□ -0.8
SPHK1-207ENST00000590959 RNF213Q63HN8 5207 aa10.02□□□□□ -0.81
SPHK1-207ENST00000590959 LINC01554Q52M75 96 aa10.02□□□□□ -0.81
SPHK1-207ENST00000590959 A0A1B0GU33 70 aa10□□□□□ -0.81
SPHK1-207ENST00000590959 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
SPHK1-207ENST00000590959 H1FX-AS1Q4G0G2 97 aa9.98□□□□□ -0.81
SPHK1-207ENST00000590959 COX6B2Q6YFQ2 88 aa9.97□□□□□ -0.81
SPHK1-207ENST00000590959 H0YAA0 97 aa9.96□□□□□ -0.81
SPHK1-207ENST00000590959 KRTAP4-1Q9BYQ7 146 aa9.93□□□□□ -0.82
SPHK1-207ENST00000590959 CSAG1Q6PB30 78 aa9.88□□□□□ -0.83
SPHK1-207ENST00000590959 K7ERS5 55 aa9.87□□□□□ -0.83
SPHK1-207ENST00000590959 KRTAP25-1Q3LHN0 102 aa9.72□□□□□ -0.85
SPHK1-207ENST00000590959 S4R3F8 94 aa9.66□□□□□ -0.86
SPHK1-207ENST00000590959 FAT4Q6V0I7 4981 aa9.63□□□□□ -0.87
SPHK1-207ENST00000590959 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
SPHK1-207ENST00000590959 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
SPHK1-207ENST00000590959 KRTAP10-6P60371 365 aaPredicted RBP9.57□□□□□ -0.88
SPHK1-207ENST00000590959 ROMO1P60602 79 aa9.55□□□□□ -0.88
SPHK1-207ENST00000590959 LCE2CQ5TA81 110 aa9.52□□□□□ -0.89
SPHK1-207ENST00000590959 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
SPHK1-207ENST00000590959 FLGP20930 4061 aaPredicted RBP9.42□□□□□ -0.9
SPHK1-207ENST00000590959 KRTAP13-4Q3LI77 160 aa9.38□□□□□ -0.91
SPHK1-207ENST00000590959 MT1HP80294 61 aa9.33□□□□□ -0.92
SPHK1-207ENST00000590959 A0A0D9SG42 100 aa9.32□□□□□ -0.92
SPHK1-207ENST00000590959 P0C880 135 aa9.28□□□□□ -0.92
SPHK1-207ENST00000590959 LCE2AQ5TA79 106 aaPredicted RBP9.28□□□□□ -0.92
SPHK1-207ENST00000590959 M0QZ58 72 aa9.27□□□□□ -0.93
SPHK1-207ENST00000590959 CRIPTQ9P021 101 aa9.21□□□□□ -0.93
SPHK1-207ENST00000590959 M0R2T5 61 aa9.16□□□□□ -0.94
SPHK1-207ENST00000590959 KRTAP12-1P59990 96 aa9.14□□□□□ -0.95
SPHK1-207ENST00000590959 KRTAP12-2P59991 146 aa9.14□□□□□ -0.95
SPHK1-207ENST00000590959 H3BS24 57 aa9.13□□□□□ -0.95
SPHK1-207ENST00000590959 SPINT4Q6UDR6 99 aa9.06□□□□□ -0.96
SPHK1-207ENST00000590959 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.97
SPHK1-207ENST00000590959 C10orf95Q9H7T3 257 aa8.96□□□□□ -0.97
SPHK1-207ENST00000590959 KRTAP9-8Q9BYQ0 159 aa8.94□□□□□ -0.98
SPHK1-207ENST00000590959 R4GN34 69 aa8.93□□□□□ -0.98
SPHK1-207ENST00000590959 MT2AP02795 61 aa8.86□□□□□ -0.99
SPHK1-207ENST00000590959 KRTAP15-1Q3LI76 137 aa8.85□□□□□ -0.99
SPHK1-207ENST00000590959 MT1FP04733 61 aa8.82□□□□□ -1
SPHK1-207ENST00000590959 KRTAP10-10P60014 251 aa8.74□□□□□ -1.01
SPHK1-207ENST00000590959 SPRR2GQ9BYE4 73 aa8.63□□□□□ -1.03
SPHK1-207ENST00000590959 KRTAP9-3Q9BYQ3 159 aa8.63□□□□□ -1.03
SPHK1-207ENST00000590959 PP632Q6XCG6 107 aa8.58□□□□□ -1.04
SPHK1-207ENST00000590959 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
SPHK1-207ENST00000590959 NDUFAF8A1L188 74 aa8.57□□□□□ -1.04
SPHK1-207ENST00000590959 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
SPHK1-207ENST00000590959 FSIP2Q5CZC0 6907 aa8.49□□□□□ -1.05
SPHK1-207ENST00000590959 LCE2BO14633 110 aa8.49□□□□□ -1.05
SPHK1-207ENST00000590959 KRTAP9-2Q9BYQ4 174 aa8.49□□□□□ -1.05
SPHK1-207ENST00000590959 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
SPHK1-207ENST00000590959 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
SPHK1-207ENST00000590959 USH2AO75445 5202 aa8.43□□□□□ -1.06
SPHK1-207ENST00000590959 KRTAP19-8Q3LI54 63 aa8.38□□□□□ -1.07
SPHK1-207ENST00000590959 KRTAP23-1A1A580 65 aa8.34□□□□□ -1.07
SPHK1-207ENST00000590959 MT1BP07438 61 aa8.26□□□□□ -1.09
SPHK1-207ENST00000590959 SSPOA2VEC9 5147 aa8.25□□□□□ -1.09
SPHK1-207ENST00000590959 TNP1P09430 55 aa8.22□□□□□ -1.09
SPHK1-207ENST00000590959 LUZP6Q538Z0 58 aa8.18□□□□□ -1.1
SPHK1-207ENST00000590959 CRCT1Q9UGL9 99 aa8.1□□□□□ -1.11
SPHK1-207ENST00000590959 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
SPHK1-207ENST00000590959 MT1XP80297 61 aa8□□□□□ -1.13
SPHK1-207ENST00000590959 KRTAP10-5P60370 271 aa8□□□□□ -1.13
SPHK1-207ENST00000590959 FCGBPQ9Y6R7 5405 aaPredicted RBP7.97□□□□□ -1.13
SPHK1-207ENST00000590959 KRTAP9-6A0A140TA67 174 aa7.96□□□□□ -1.13
SPHK1-207ENST00000590959 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.14
SPHK1-207ENST00000590959 SPRR5A0A1B0GTR4 108 aa7.93□□□□□ -1.14
SPHK1-207ENST00000590959 A0A0A0MQY5 61 aa7.87□□□□□ -1.15
SPHK1-207ENST00000590959 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
SPHK1-207ENST00000590959 MACF1Q9UPN3 7388 aaKnown RBP7.68□□□□□ -1.18
SPHK1-207ENST00000590959 KRTAP10-12P60413 245 aa7.63□□□□□ -1.19
SPHK1-207ENST00000590959 LCE3AQ5TA76 89 aa7.61□□□□□ -1.19
SPHK1-207ENST00000590959 KMT2DO14686 5537 aa7.6□□□□□ -1.19
SPHK1-207ENST00000590959 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
SPHK1-207ENST00000590959 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.53□□□□□ -1.2
SPHK1-207ENST00000590959 SYNE2Q8WXH0 6885 aaKnown RBP7.53□□□□□ -1.2
SPHK1-207ENST00000590959 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
SPHK1-207ENST00000590959 KRTAP4-8Q9BYQ9 185 aa7.41□□□□□ -1.22
SPHK1-207ENST00000590959 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
SPHK1-207ENST00000590959 KRTAP9-7A8MTY7 169 aa7.24□□□□□ -1.25
SPHK1-207ENST00000590959 KRTAP19-5Q3LI72 72 aa7.24□□□□□ -1.25
SPHK1-207ENST00000590959 INE1O15225 51 aa7.2□□□□□ -1.26
SPHK1-207ENST00000590959 KRTAP6-3Q3LI67 103 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms