RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 H0YAA0 97 aa8.5□□□□□ -1.05
CXXC1-214ENST00000590901 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
CXXC1-214ENST00000590901 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
CXXC1-214ENST00000590901 ABCA13Q86UQ4 5058 aa8.4□□□□□ -1.06
CXXC1-214ENST00000590901 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
CXXC1-214ENST00000590901 A0A1B0GU33 70 aa8.4□□□□□ -1.07
CXXC1-214ENST00000590901 KRTAP10-8P60410 259 aa8.37□□□□□ -1.07
CXXC1-214ENST00000590901 ROMO1P60602 79 aa8.36□□□□□ -1.07
CXXC1-214ENST00000590901 H1FX-AS1Q4G0G2 97 aa8.36□□□□□ -1.07
CXXC1-214ENST00000590901 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
CXXC1-214ENST00000590901 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
CXXC1-214ENST00000590901 KRTAP3-1Q9BYR8 98 aa8.26□□□□□ -1.09
CXXC1-214ENST00000590901 K7ERS5 55 aa8.26□□□□□ -1.09
CXXC1-214ENST00000590901 HERC2O95714 4834 aa8.24□□□□□ -1.09
CXXC1-214ENST00000590901 LPAP08519 4548 aa8.24□□□□□ -1.09
CXXC1-214ENST00000590901 LRP2P98164 4655 aa8.22□□□□□ -1.09
CXXC1-214ENST00000590901 CRIPTQ9P021 101 aa8.21□□□□□ -1.09
CXXC1-214ENST00000590901 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
CXXC1-214ENST00000590901 COX6B2Q6YFQ2 88 aa8.17□□□□□ -1.1
CXXC1-214ENST00000590901 BIRC6Q9NR09 4857 aa8.17□□□□□ -1.1
CXXC1-214ENST00000590901 P0C880 135 aa8.12□□□□□ -1.11
CXXC1-214ENST00000590901 PCLOQ9Y6V0 5065 aa8.09□□□□□ -1.11
CXXC1-214ENST00000590901 RPL37P61927 97 aaKnown RBP8.04□□□□□ -1.12
CXXC1-214ENST00000590901 XP32Q5T750 250 aa8.04□□□□□ -1.12
CXXC1-214ENST00000590901 HERC1Q15751 4861 aa8□□□□□ -1.13
CXXC1-214ENST00000590901 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
CXXC1-214ENST00000590901 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
CXXC1-214ENST00000590901 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.13
CXXC1-214ENST00000590901 A0A0D9SG42 100 aa7.94□□□□□ -1.14
CXXC1-214ENST00000590901 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
CXXC1-214ENST00000590901 MUC2Q02817 5179 aa7.89□□□□□ -1.15
CXXC1-214ENST00000590901 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
CXXC1-214ENST00000590901 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
CXXC1-214ENST00000590901 C10orf95Q9H7T3 257 aa7.86□□□□□ -1.15
CXXC1-214ENST00000590901 J3QL48 77 aa7.82□□□□□ -1.16
CXXC1-214ENST00000590901 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
CXXC1-214ENST00000590901 S4R3F8 94 aa7.79□□□□□ -1.16
CXXC1-214ENST00000590901 NDUFAF8A1L188 74 aa7.78□□□□□ -1.16
CXXC1-214ENST00000590901 MUC17Q685J3 4493 aa7.73□□□□□ -1.17
CXXC1-214ENST00000590901 HMCN2Q8NDA2 5059 aa7.73□□□□□ -1.17
CXXC1-214ENST00000590901 KRTAP12-2P59991 146 aa7.72□□□□□ -1.17
CXXC1-214ENST00000590901 KRTAP4-1Q9BYQ7 146 aa7.7□□□□□ -1.18
CXXC1-214ENST00000590901 A0A0A0MQY5 61 aa7.65□□□□□ -1.18
CXXC1-214ENST00000590901 KRTAP12-1P59990 96 aa7.65□□□□□ -1.18
CXXC1-214ENST00000590901 RNF213Q63HN8 5207 aa7.6□□□□□ -1.19
CXXC1-214ENST00000590901 UBR4Q5T4S7 5183 aa7.57□□□□□ -1.2
CXXC1-214ENST00000590901 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.21
CXXC1-214ENST00000590901 M0QZ58 72 aa7.51□□□□□ -1.21
CXXC1-214ENST00000590901 SEC61BP60468 96 aaKnown RBP7.48□□□□□ -1.21
CXXC1-214ENST00000590901 KRTAP19-2Q3LHN2 52 aa7.44□□□□□ -1.22
CXXC1-214ENST00000590901 FLGP20930 4061 aaPredicted RBP7.29□□□□□ -1.24
CXXC1-214ENST00000590901 PLAC4Q8WY50 150 aa7.28□□□□□ -1.24
CXXC1-214ENST00000590901 R4GN34 69 aa7.23□□□□□ -1.25
CXXC1-214ENST00000590901 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
CXXC1-214ENST00000590901 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
CXXC1-214ENST00000590901 LUZP6Q538Z0 58 aa7.15□□□□□ -1.26
CXXC1-214ENST00000590901 PP632Q6XCG6 107 aa7.05□□□□□ -1.28
CXXC1-214ENST00000590901 MT1HP80294 61 aa6.97□□□□□ -1.29
CXXC1-214ENST00000590901 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
CXXC1-214ENST00000590901 M0R2T5 61 aa6.88□□□□□ -1.31
CXXC1-214ENST00000590901 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
CXXC1-214ENST00000590901 MT1FP04733 61 aa6.77□□□□□ -1.33
CXXC1-214ENST00000590901 MT2AP02795 61 aa6.75□□□□□ -1.33
CXXC1-214ENST00000590901 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
CXXC1-214ENST00000590901 TNP1P09430 55 aa6.72□□□□□ -1.33
CXXC1-214ENST00000590901 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.33
CXXC1-214ENST00000590901 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
CXXC1-214ENST00000590901 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
CXXC1-214ENST00000590901 USH2AO75445 5202 aa6.6□□□□□ -1.35
CXXC1-214ENST00000590901 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
CXXC1-214ENST00000590901 LCE2AQ5TA79 106 aaPredicted RBP6.53□□□□□ -1.36
CXXC1-214ENST00000590901 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
CXXC1-214ENST00000590901 MT1BP07438 61 aa6.43□□□□□ -1.38
CXXC1-214ENST00000590901 KRTAP19-8Q3LI54 63 aa6.38□□□□□ -1.39
CXXC1-214ENST00000590901 LCE2BO14633 110 aa6.37□□□□□ -1.39
CXXC1-214ENST00000590901 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
CXXC1-214ENST00000590901 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
CXXC1-214ENST00000590901 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
CXXC1-214ENST00000590901 MT1XP80297 61 aa6.26□□□□□ -1.41
CXXC1-214ENST00000590901 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
CXXC1-214ENST00000590901 INE1O15225 51 aa6.25□□□□□ -1.41
CXXC1-214ENST00000590901 KMT2DO14686 5537 aa6.21□□□□□ -1.42
CXXC1-214ENST00000590901 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
CXXC1-214ENST00000590901 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.42
CXXC1-214ENST00000590901 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
CXXC1-214ENST00000590901 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
CXXC1-214ENST00000590901 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
CXXC1-214ENST00000590901 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
CXXC1-214ENST00000590901 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
CXXC1-214ENST00000590901 FCGBPQ9Y6R7 5405 aaPredicted RBP5.8□□□□□ -1.48
CXXC1-214ENST00000590901 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
CXXC1-214ENST00000590901 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
CXXC1-214ENST00000590901 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
CXXC1-214ENST00000590901 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
CXXC1-214ENST00000590901 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
CXXC1-214ENST00000590901 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
CXXC1-214ENST00000590901 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
CXXC1-214ENST00000590901 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
CXXC1-214ENST00000590901 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
CXXC1-214ENST00000590901 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms