RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 KLKP1Q107X0 134 aa10.37□□□□□ -0.75
R3HDM4-206ENST00000590454 MT1FP04733 61 aa10.34□□□□□ -0.75
R3HDM4-206ENST00000590454 KRTAP9-3Q9BYQ3 159 aa10.34□□□□□ -0.75
R3HDM4-206ENST00000590454 TRAV7A0A075B6U4 112 aa10.3□□□□□ -0.76
R3HDM4-206ENST00000590454 KRTAP10-10P60014 251 aa10.3□□□□□ -0.76
R3HDM4-206ENST00000590454 H3BPC8 53 aa10.28□□□□□ -0.76
R3HDM4-206ENST00000590454 SMIM20Q8N5G0 67 aa10.27□□□□□ -0.77
R3HDM4-206ENST00000590454 S4R3F8 94 aa10.23□□□□□ -0.77
R3HDM4-206ENST00000590454 LCA10Q71F78 164 aa10.2□□□□□ -0.78
R3HDM4-206ENST00000590454 KRTAP19-6Q3LI70 58 aa10.19□□□□□ -0.78
R3HDM4-206ENST00000590454 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
R3HDM4-206ENST00000590454 KRTAP6-3Q3LI67 103 aa10.13□□□□□ -0.79
R3HDM4-206ENST00000590454 SERP2Q8N6R1 65 aa10.13□□□□□ -0.79
R3HDM4-206ENST00000590454 SNURFQ9Y675 71 aa10.11□□□□□ -0.79
R3HDM4-206ENST00000590454 A8MUN3 132 aa10.08□□□□□ -0.8
R3HDM4-206ENST00000590454 CSAG1Q6PB30 78 aa10.05□□□□□ -0.8
R3HDM4-206ENST00000590454 C20orf197Q8N268 126 aa10.05□□□□□ -0.8
R3HDM4-206ENST00000590454 DMAC1Q96GE9 116 aa10.02□□□□□ -0.81
R3HDM4-206ENST00000590454 COX7CP15954 63 aa9.95□□□□□ -0.82
R3HDM4-206ENST00000590454 NDUFC1O43677 76 aa9.94□□□□□ -0.82
R3HDM4-206ENST00000590454 CYSTM1Q9H1C7 97 aa9.85□□□□□ -0.83
R3HDM4-206ENST00000590454 ANAPC13Q9BS18 74 aa9.84□□□□□ -0.83
R3HDM4-206ENST00000590454 ACYP2P14621 99 aa9.83□□□□□ -0.84
R3HDM4-206ENST00000590454 SPANXA2-OT1Q8N9U9 137 aa9.82□□□□□ -0.84
R3HDM4-206ENST00000590454 NEBP20929 6669 aa9.8□□□□□ -0.84
R3HDM4-206ENST00000590454 H0YAA0 97 aa9.73□□□□□ -0.85
R3HDM4-206ENST00000590454 H7BZZ5 65 aa9.73□□□□□ -0.85
R3HDM4-206ENST00000590454 CCDC179H3BU77 68 aa9.71□□□□□ -0.86
R3HDM4-206ENST00000590454 ADM2Q7Z4H4 148 aa9.71□□□□□ -0.86
R3HDM4-206ENST00000590454 KRTAP20-1Q3LI63 56 aa9.69□□□□□ -0.86
R3HDM4-206ENST00000590454 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
R3HDM4-206ENST00000590454 SPRR2GQ9BYE4 73 aa9.62□□□□□ -0.87
R3HDM4-206ENST00000590454 MUC12Q9UKN1 5478 aa9.6□□□□□ -0.87
R3HDM4-206ENST00000590454 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
R3HDM4-206ENST00000590454 P0C880 135 aa9.58□□□□□ -0.88
R3HDM4-206ENST00000590454 COA5Q86WW8 74 aa9.57□□□□□ -0.88
R3HDM4-206ENST00000590454 SPTSSBQ8NFR3 76 aa9.56□□□□□ -0.88
R3HDM4-206ENST00000590454 CRIPTQ9P021 101 aa9.55□□□□□ -0.88
R3HDM4-206ENST00000590454 A6NN06 94 aa9.5□□□□□ -0.89
R3HDM4-206ENST00000590454 KRTAP19-8Q3LI54 63 aa9.5□□□□□ -0.89
R3HDM4-206ENST00000590454 MT1BP07438 61 aa9.49□□□□□ -0.89
R3HDM4-206ENST00000590454 Q5VV11 94 aa9.42□□□□□ -0.9
R3HDM4-206ENST00000590454 KRTAP5-9P26371 169 aa9.38□□□□□ -0.91
R3HDM4-206ENST00000590454 R4GN34 69 aa9.36□□□□□ -0.91
R3HDM4-206ENST00000590454 M0QZ58 72 aa9.35□□□□□ -0.91
R3HDM4-206ENST00000590454 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
R3HDM4-206ENST00000590454 KRTAP2-3P0C7H8 128 aa9.27□□□□□ -0.93
R3HDM4-206ENST00000590454 KRTAP2-4Q9BYR9 128 aa9.27□□□□□ -0.93
R3HDM4-206ENST00000590454 TMEM258P61165 79 aa9.26□□□□□ -0.93
R3HDM4-206ENST00000590454 KRTAP10-5P60370 271 aa9.25□□□□□ -0.93
R3HDM4-206ENST00000590454 KMT2DO14686 5537 aa9.23□□□□□ -0.93
R3HDM4-206ENST00000590454 MDN1Q9NU22 5596 aa9.22□□□□□ -0.93
R3HDM4-206ENST00000590454 LINC01554Q52M75 96 aa9.21□□□□□ -0.94
R3HDM4-206ENST00000590454 KRTAP13-4Q3LI77 160 aa9.17□□□□□ -0.94
R3HDM4-206ENST00000590454 SEC61GP60059 68 aa9.13□□□□□ -0.95
R3HDM4-206ENST00000590454 SERP1Q9Y6X1 66 aa9.12□□□□□ -0.95
R3HDM4-206ENST00000590454 PLAC4Q8WY50 150 aa9.09□□□□□ -0.95
R3HDM4-206ENST00000590454 A0A1B0GU69 56 aa9.03□□□□□ -0.96
R3HDM4-206ENST00000590454 PCP4P48539 62 aa9.03□□□□□ -0.96
R3HDM4-206ENST00000590454 A0A1B0GU33 70 aa9.01□□□□□ -0.97
R3HDM4-206ENST00000590454 MT1XP80297 61 aa9□□□□□ -0.97
R3HDM4-206ENST00000590454 SPATA8Q6RVD6 105 aa8.99□□□□□ -0.97
R3HDM4-206ENST00000590454 SPRR2EP22531 72 aa8.98□□□□□ -0.97
R3HDM4-206ENST00000590454 SPRR2BP35325 72 aa8.98□□□□□ -0.97
R3HDM4-206ENST00000590454 SPRR2AP35326 72 aa8.98□□□□□ -0.97
R3HDM4-206ENST00000590454 SPRR2FQ96RM1 72 aa8.95□□□□□ -0.98
R3HDM4-206ENST00000590454 KRTAP2-2Q9BYT5 123 aa8.94□□□□□ -0.98
R3HDM4-206ENST00000590454 KRTAP2-1Q9BYU5 128 aa8.94□□□□□ -0.98
R3HDM4-206ENST00000590454 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
R3HDM4-206ENST00000590454 A0A0D9SG42 100 aa8.89□□□□□ -0.99
R3HDM4-206ENST00000590454 PRO2289Q9P1D8 64 aa8.87□□□□□ -0.99
R3HDM4-206ENST00000590454 PRR15LQ9BU68 103 aa8.84□□□□□ -0.99
R3HDM4-206ENST00000590454 A8MU10 97 aa8.76□□□□□ -1.01
R3HDM4-206ENST00000590454 LCE1AQ5T7P2 110 aa8.76□□□□□ -1.01
R3HDM4-206ENST00000590454 KRTAP12-1P59990 96 aa8.73□□□□□ -1.01
R3HDM4-206ENST00000590454 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.02
R3HDM4-206ENST00000590454 KRTAP8-1Q8IUC2 63 aa8.71□□□□□ -1.02
R3HDM4-206ENST00000590454 SMIM26A0A096LP01 95 aa8.69□□□□□ -1.02
R3HDM4-206ENST00000590454 SPRR2DP22532 72 aa8.69□□□□□ -1.02
R3HDM4-206ENST00000590454 KRTAP12-2P59991 146 aa8.69□□□□□ -1.02
R3HDM4-206ENST00000590454 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
R3HDM4-206ENST00000590454 Q1T7F1 81 aa8.66□□□□□ -1.02
R3HDM4-206ENST00000590454 PSPHP1O15172 72 aa8.62□□□□□ -1.03
R3HDM4-206ENST00000590454 KRTAP10-7P60409 375 aaPredicted RBP8.62□□□□□ -1.03
R3HDM4-206ENST00000590454 V9GYY9 64 aa8.61□□□□□ -1.03
R3HDM4-206ENST00000590454 RPS28P62857 69 aaKnown RBP8.6□□□□□ -1.03
R3HDM4-206ENST00000590454 UQCR11O14957 56 aa8.58□□□□□ -1.04
R3HDM4-206ENST00000590454 KRTAP10-12P60413 245 aa8.52□□□□□ -1.05
R3HDM4-206ENST00000590454 LCE3BQ5TA77 95 aa8.51□□□□□ -1.05
R3HDM4-206ENST00000590454 KRTAP4-8A0A0G2JLE6 195 aa8.5□□□□□ -1.05
R3HDM4-206ENST00000590454 KRTAP4-8Q9BYQ9 185 aa8.5□□□□□ -1.05
R3HDM4-206ENST00000590454 MIR22HGQ0VDD5 57 aa8.47□□□□□ -1.05
R3HDM4-206ENST00000590454 GPR98Q8WXG9 6306 aa8.38□□□□□ -1.07
R3HDM4-206ENST00000590454 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
R3HDM4-206ENST00000590454 A6NED7 52 aa8.3□□□□□ -1.08
R3HDM4-206ENST00000590454 DSTQ03001 7570 aaKnown RBP8.15□□□□□ -1.1
R3HDM4-206ENST00000590454 K7ERS5 55 aa8.13□□□□□ -1.11
R3HDM4-206ENST00000590454 TNP1P09430 55 aa8.11□□□□□ -1.11
R3HDM4-206ENST00000590454 KRTAP4-9Q9BYQ8 210 aa8.08□□□□□ -1.12
R3HDM4-206ENST00000590454 KRTAP19-7Q3SYF9 63 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms