RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SACSQ9NZJ4 4579 aa8.07□□□□□ -1.12
CIRBP-228ENST00000590347 RPL37P61927 97 aaKnown RBP8.05□□□□□ -1.12
CIRBP-228ENST00000590347 FAT1Q14517 4588 aa8.03□□□□□ -1.12
CIRBP-228ENST00000590347 KRTAP1-4P0C5Y4 121 aa8.01□□□□□ -1.13
CIRBP-228ENST00000590347 DYNC1H1Q14204 4646 aaKnown RBP7.96□□□□□ -1.14
CIRBP-228ENST00000590347 KRTAP10-6P60371 365 aaPredicted RBP7.91□□□□□ -1.14
CIRBP-228ENST00000590347 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
CIRBP-228ENST00000590347 RYR2Q92736 4967 aa7.86□□□□□ -1.15
CIRBP-228ENST00000590347 S4R3F8 94 aa7.84□□□□□ -1.15
CIRBP-228ENST00000590347 A0A1B0GVY2 172 aa7.81□□□□□ -1.16
CIRBP-228ENST00000590347 APOBP04114 4563 aaKnown RBP7.8□□□□□ -1.16
CIRBP-228ENST00000590347 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
CIRBP-228ENST00000590347 RYR3Q15413 4870 aa7.78□□□□□ -1.16
CIRBP-228ENST00000590347 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
CIRBP-228ENST00000590347 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
CIRBP-228ENST00000590347 MYCBP2O75592 4640 aa7.76□□□□□ -1.17
CIRBP-228ENST00000590347 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
CIRBP-228ENST00000590347 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
CIRBP-228ENST00000590347 KIAA1109Q2LD37 5005 aa7.68□□□□□ -1.18
CIRBP-228ENST00000590347 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
CIRBP-228ENST00000590347 KRTAP12-1P59990 96 aa7.65□□□□□ -1.18
CIRBP-228ENST00000590347 HSPG2P98160 4391 aa7.62□□□□□ -1.19
CIRBP-228ENST00000590347 KRTAP17-1Q9BYP8 105 aa7.62□□□□□ -1.19
CIRBP-228ENST00000590347 Q5VSD8 79 aa7.6□□□□□ -1.19
CIRBP-228ENST00000590347 XP32Q5T750 250 aa7.57□□□□□ -1.2
CIRBP-228ENST00000590347 PKHD1L1Q86WI1 4243 aa7.55□□□□□ -1.2
CIRBP-228ENST00000590347 EPPK1P58107 5090 aaKnown RBP7.55□□□□□ -1.2
CIRBP-228ENST00000590347 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
CIRBP-228ENST00000590347 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
CIRBP-228ENST00000590347 RYR1P21817 5038 aa7.48□□□□□ -1.21
CIRBP-228ENST00000590347 LPAP08519 4548 aa7.45□□□□□ -1.22
CIRBP-228ENST00000590347 RPS29P62273 56 aaKnown RBP7.43□□□□□ -1.22
CIRBP-228ENST00000590347 TNXBP22105 4242 aa7.38□□□□□ -1.23
CIRBP-228ENST00000590347 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
CIRBP-228ENST00000590347 M0QZ58 72 aa7.33□□□□□ -1.24
CIRBP-228ENST00000590347 ABCA13Q86UQ4 5058 aa7.3□□□□□ -1.24
CIRBP-228ENST00000590347 MT1HL1P0DM35 61 aa7.27□□□□□ -1.24
CIRBP-228ENST00000590347 LRP2P98164 4655 aa7.25□□□□□ -1.25
CIRBP-228ENST00000590347 J3QL48 77 aa7.24□□□□□ -1.25
CIRBP-228ENST00000590347 SEC61BP60468 96 aaKnown RBP7.21□□□□□ -1.26
CIRBP-228ENST00000590347 R4GN34 69 aa7.21□□□□□ -1.26
CIRBP-228ENST00000590347 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
CIRBP-228ENST00000590347 HERC2O95714 4834 aa7.08□□□□□ -1.28
CIRBP-228ENST00000590347 MUC2Q02817 5179 aa7.01□□□□□ -1.29
CIRBP-228ENST00000590347 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
CIRBP-228ENST00000590347 HERC1Q15751 4861 aa6.9□□□□□ -1.3
CIRBP-228ENST00000590347 BIRC6Q9NR09 4857 aa6.89□□□□□ -1.31
CIRBP-228ENST00000590347 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
CIRBP-228ENST00000590347 KRTAP4-1Q9BYQ7 146 aa6.81□□□□□ -1.32
CIRBP-228ENST00000590347 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
CIRBP-228ENST00000590347 RNF213Q63HN8 5207 aa6.67□□□□□ -1.34
CIRBP-228ENST00000590347 MUC17Q685J3 4493 aa6.65□□□□□ -1.35
CIRBP-228ENST00000590347 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
CIRBP-228ENST00000590347 TNP1P09430 55 aa6.61□□□□□ -1.35
CIRBP-228ENST00000590347 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
CIRBP-228ENST00000590347 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
CIRBP-228ENST00000590347 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
CIRBP-228ENST00000590347 HMCN2Q8NDA2 5059 aa6.56□□□□□ -1.36
CIRBP-228ENST00000590347 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
CIRBP-228ENST00000590347 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
CIRBP-228ENST00000590347 M0R2T5 61 aa6.32□□□□□ -1.4
CIRBP-228ENST00000590347 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
CIRBP-228ENST00000590347 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
CIRBP-228ENST00000590347 INE1O15225 51 aa6.24□□□□□ -1.41
CIRBP-228ENST00000590347 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.43
CIRBP-228ENST00000590347 MT1HP80294 61 aa6.12□□□□□ -1.43
CIRBP-228ENST00000590347 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
CIRBP-228ENST00000590347 MT1FP04733 61 aa6□□□□□ -1.45
CIRBP-228ENST00000590347 MT2AP02795 61 aa5.97□□□□□ -1.45
CIRBP-228ENST00000590347 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.45
CIRBP-228ENST00000590347 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
CIRBP-228ENST00000590347 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
CIRBP-228ENST00000590347 USH2AO75445 5202 aa5.89□□□□□ -1.47
CIRBP-228ENST00000590347 KRTAP8-1Q8IUC2 63 aa5.88□□□□□ -1.47
CIRBP-228ENST00000590347 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
CIRBP-228ENST00000590347 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
CIRBP-228ENST00000590347 KMT2DO14686 5537 aa5.85□□□□□ -1.47
CIRBP-228ENST00000590347 FSIP2Q5CZC0 6907 aa5.75□□□□□ -1.49
CIRBP-228ENST00000590347 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
CIRBP-228ENST00000590347 MT1BP07438 61 aa5.68□□□□□ -1.5
CIRBP-228ENST00000590347 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
CIRBP-228ENST00000590347 MT1XP80297 61 aa5.66□□□□□ -1.5
CIRBP-228ENST00000590347 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
CIRBP-228ENST00000590347 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
CIRBP-228ENST00000590347 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
CIRBP-228ENST00000590347 LCE2BO14633 110 aa5.57□□□□□ -1.52
CIRBP-228ENST00000590347 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
CIRBP-228ENST00000590347 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
CIRBP-228ENST00000590347 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
CIRBP-228ENST00000590347 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
CIRBP-228ENST00000590347 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
CIRBP-228ENST00000590347 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
CIRBP-228ENST00000590347 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
CIRBP-228ENST00000590347 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
CIRBP-228ENST00000590347 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
CIRBP-228ENST00000590347 SSPOA2VEC9 5147 aa5.29□□□□□ -1.56
CIRBP-228ENST00000590347 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
CIRBP-228ENST00000590347 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
CIRBP-228ENST00000590347 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
CIRBP-228ENST00000590347 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms