RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 K7EQZ3 153 aa4.1□□□□□ -1.75
SMAD4-210ENST00000590061 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-210ENST00000590061 CASC2Q6XLA1 102 aa4.1□□□□□ -1.75
SMAD4-210ENST00000590061 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
SMAD4-210ENST00000590061 TMEM254Q8TBM7 123 aa4.1□□□□□ -1.75
SMAD4-210ENST00000590061 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
SMAD4-210ENST00000590061 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
SMAD4-210ENST00000590061 NDUFC1O43677 76 aa4.08□□□□□ -1.76
SMAD4-210ENST00000590061 MRPL34Q9BQ48 92 aaKnown RBP4.08□□□□□ -1.76
SMAD4-210ENST00000590061 HMCN2Q8NDA2 5059 aa4.07□□□□□ -1.76
SMAD4-210ENST00000590061 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-210ENST00000590061 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
SMAD4-210ENST00000590061 MMP24-AS1A0A0U1RRL7 71 aa4.05□□□□□ -1.76
SMAD4-210ENST00000590061 Q8N9L7 120 aa4.05□□□□□ -1.76
SMAD4-210ENST00000590061 RETNLBQ9BQ08 111 aa4.05□□□□□ -1.76
SMAD4-210ENST00000590061 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
SMAD4-210ENST00000590061 WFDC13Q8IUB5 93 aa4.04□□□□□ -1.76
SMAD4-210ENST00000590061 H3BPC8 53 aa4.03□□□□□ -1.76
SMAD4-210ENST00000590061 KRTAP13-3Q3SY46 172 aa4.03□□□□□ -1.76
SMAD4-210ENST00000590061 C20orf166-AS1Q96NR2 134 aa4.03□□□□□ -1.76
SMAD4-210ENST00000590061 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
SMAD4-210ENST00000590061 A0A087WVE0 104 aa4.02□□□□□ -1.77
SMAD4-210ENST00000590061 A8MUU9 505 aa4.01□□□□□ -1.77
SMAD4-210ENST00000590061 C9orf92A6NGG3 77 aa4□□□□□ -1.77
SMAD4-210ENST00000590061 LUZP6Q538Z0 58 aa4□□□□□ -1.77
SMAD4-210ENST00000590061 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
SMAD4-210ENST00000590061 RPL37P61927 97 aaKnown RBP3.98□□□□□ -1.77
SMAD4-210ENST00000590061 ZCCHC13Q8WW36 166 aaKnown RBP3.98□□□□□ -1.77
SMAD4-210ENST00000590061 LOC101927531A0A1B0GV80 90 aa3.97□□□□□ -1.77
SMAD4-210ENST00000590061 A6NED7 52 aa3.97□□□□□ -1.77
SMAD4-210ENST00000590061 A6NN06 94 aa3.97□□□□□ -1.77
SMAD4-210ENST00000590061 Q1T7F1 81 aa3.97□□□□□ -1.77
SMAD4-210ENST00000590061 H0Y9P7 68 aa3.94□□□□□ -1.78
SMAD4-210ENST00000590061 CYP4F30PQ9H0H9 118 aa3.94□□□□□ -1.78
SMAD4-210ENST00000590061 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
SMAD4-210ENST00000590061 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
SMAD4-210ENST00000590061 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
SMAD4-210ENST00000590061 LINC00208Q96KT6 92 aa3.9□□□□□ -1.79
SMAD4-210ENST00000590061 MT3P25713 68 aa3.89□□□□□ -1.79
SMAD4-210ENST00000590061 KLKP1Q107X0 134 aa3.89□□□□□ -1.79
SMAD4-210ENST00000590061 LRP2P98164 4655 aa3.88□□□□□ -1.79
SMAD4-210ENST00000590061 Q5W150 140 aa3.88□□□□□ -1.79
SMAD4-210ENST00000590061 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
SMAD4-210ENST00000590061 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
SMAD4-210ENST00000590061 SPINK7P58062 85 aa3.87□□□□□ -1.79
SMAD4-210ENST00000590061 PCOTHQ58A44 107 aa3.87□□□□□ -1.79
SMAD4-210ENST00000590061 H7BZZ5 65 aa3.85□□□□□ -1.79
SMAD4-210ENST00000590061 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.79
SMAD4-210ENST00000590061 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
SMAD4-210ENST00000590061 ROMO1P60602 79 aa3.82□□□□□ -1.8
SMAD4-210ENST00000590061 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
SMAD4-210ENST00000590061 SNURFQ9Y675 71 aa3.81□□□□□ -1.8
SMAD4-210ENST00000590061 CHKB-CPT1BH3BT56 60 aa3.78□□□□□ -1.8
SMAD4-210ENST00000590061 HRES1P13985 223 aa3.78□□□□□ -1.8
SMAD4-210ENST00000590061 ACYP2P14621 99 aa3.78□□□□□ -1.8
SMAD4-210ENST00000590061 COX6B2Q6YFQ2 88 aa3.78□□□□□ -1.8
SMAD4-210ENST00000590061 CYSTM1Q9H1C7 97 aa3.78□□□□□ -1.8
SMAD4-210ENST00000590061 LPAP08519 4548 aa3.76□□□□□ -1.81
SMAD4-210ENST00000590061 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
SMAD4-210ENST00000590061 DMAC1Q96GE9 116 aa3.74□□□□□ -1.81
SMAD4-210ENST00000590061 MUC2Q02817 5179 aa3.74□□□□□ -1.81
SMAD4-210ENST00000590061 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
SMAD4-210ENST00000590061 MUC17Q685J3 4493 aa3.72□□□□□ -1.81
SMAD4-210ENST00000590061 Q5VV11 94 aa3.69□□□□□ -1.82
SMAD4-210ENST00000590061 S4R3F8 94 aa3.67□□□□□ -1.82
SMAD4-210ENST00000590061 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
SMAD4-210ENST00000590061 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
SMAD4-210ENST00000590061 CSAG1Q6PB30 78 aa3.66□□□□□ -1.82
SMAD4-210ENST00000590061 COA5Q86WW8 74 aa3.64□□□□□ -1.83
SMAD4-210ENST00000590061 KRTAP4-1Q9BYQ7 146 aa3.64□□□□□ -1.83
SMAD4-210ENST00000590061 FAT4Q6V0I7 4981 aa3.63□□□□□ -1.83
SMAD4-210ENST00000590061 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
SMAD4-210ENST00000590061 A0A1B0GU33 70 aa3.61□□□□□ -1.83
SMAD4-210ENST00000590061 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
SMAD4-210ENST00000590061 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
SMAD4-210ENST00000590061 M0R2T5 61 aa3.59□□□□□ -1.83
SMAD4-210ENST00000590061 PRR15LQ9BU68 103 aa3.59□□□□□ -1.83
SMAD4-210ENST00000590061 H0YAA0 97 aa3.57□□□□□ -1.84
SMAD4-210ENST00000590061 KRTAP19-2Q3LHN2 52 aa3.56□□□□□ -1.84
SMAD4-210ENST00000590061 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
SMAD4-210ENST00000590061 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
SMAD4-210ENST00000590061 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
SMAD4-210ENST00000590061 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
SMAD4-210ENST00000590061 A0A1B0GU69 56 aa3.51□□□□□ -1.85
SMAD4-210ENST00000590061 MT1HP80294 61 aa3.51□□□□□ -1.85
SMAD4-210ENST00000590061 CRIPTQ9P021 101 aa3.51□□□□□ -1.85
SMAD4-210ENST00000590061 P0C880 135 aa3.5□□□□□ -1.85
SMAD4-210ENST00000590061 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
SMAD4-210ENST00000590061 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
SMAD4-210ENST00000590061 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
SMAD4-210ENST00000590061 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
SMAD4-210ENST00000590061 UQCR11O14957 56 aa3.49□□□□□ -1.85
SMAD4-210ENST00000590061 SPINT4Q6UDR6 99 aa3.49□□□□□ -1.85
SMAD4-210ENST00000590061 A8MU10 97 aa3.47□□□□□ -1.85
SMAD4-210ENST00000590061 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
SMAD4-210ENST00000590061 M0QZ58 72 aa3.45□□□□□ -1.86
SMAD4-210ENST00000590061 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
SMAD4-210ENST00000590061 R4GN34 69 aa3.41□□□□□ -1.86
SMAD4-210ENST00000590061 KRTAP10-10P60014 251 aa3.4□□□□□ -1.87
SMAD4-210ENST00000590061 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms