RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 LINC01558Q9Y6Z2 57 aa11.37□□□□□ -0.59
CAPNS1-207ENST00000589146 S4R3F8 94 aa11.32□□□□□ -0.6
CAPNS1-207ENST00000589146 RNF213Q63HN8 5207 aa11.31□□□□□ -0.6
CAPNS1-207ENST00000589146 KRTAP19-2Q3LHN2 52 aa11.31□□□□□ -0.6
CAPNS1-207ENST00000589146 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
CAPNS1-207ENST00000589146 LCA10Q71F78 164 aa11.29□□□□□ -0.6
CAPNS1-207ENST00000589146 PRR15LQ9BU68 103 aa11.19□□□□□ -0.62
CAPNS1-207ENST00000589146 PSPHP1O15172 72 aa11.17□□□□□ -0.62
CAPNS1-207ENST00000589146 Q5VV11 94 aa11.14□□□□□ -0.63
CAPNS1-207ENST00000589146 A0A1B0GU69 56 aa11.12□□□□□ -0.63
CAPNS1-207ENST00000589146 CSAG1Q6PB30 78 aa11.08□□□□□ -0.64
CAPNS1-207ENST00000589146 SEC61GP60059 68 aa11.05□□□□□ -0.64
CAPNS1-207ENST00000589146 LCE2CQ5TA81 110 aa11.01□□□□□ -0.65
CAPNS1-207ENST00000589146 FLGP20930 4061 aaPredicted RBP11.01□□□□□ -0.65
CAPNS1-207ENST00000589146 MUC2Q02817 5179 aa11□□□□□ -0.65
CAPNS1-207ENST00000589146 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
CAPNS1-207ENST00000589146 H0YAA0 97 aa10.91□□□□□ -0.66
CAPNS1-207ENST00000589146 KRTAP10-6P60371 365 aaPredicted RBP10.89□□□□□ -0.67
CAPNS1-207ENST00000589146 A6NED7 52 aa10.84□□□□□ -0.67
CAPNS1-207ENST00000589146 UQCR11O14957 56 aa10.81□□□□□ -0.68
CAPNS1-207ENST00000589146 ADM2Q7Z4H4 148 aa10.81□□□□□ -0.68
CAPNS1-207ENST00000589146 A0A1B0GU33 70 aa10.8□□□□□ -0.68
CAPNS1-207ENST00000589146 P0C880 135 aa10.76□□□□□ -0.69
CAPNS1-207ENST00000589146 MT1HP80294 61 aa10.75□□□□□ -0.69
CAPNS1-207ENST00000589146 SPATA8Q6RVD6 105 aa10.73□□□□□ -0.69
CAPNS1-207ENST00000589146 BRK1Q8WUW1 75 aa10.72□□□□□ -0.69
CAPNS1-207ENST00000589146 CDC42SE1Q9NRR8 79 aa10.72□□□□□ -0.69
CAPNS1-207ENST00000589146 FAT4Q6V0I7 4981 aa10.72□□□□□ -0.69
CAPNS1-207ENST00000589146 MIR22HGQ0VDD5 57 aa10.68□□□□□ -0.7
CAPNS1-207ENST00000589146 A8MU10 97 aa10.6□□□□□ -0.71
CAPNS1-207ENST00000589146 PRO0628Q9UI54 55 aa10.57□□□□□ -0.72
CAPNS1-207ENST00000589146 M0R2T5 61 aa10.56□□□□□ -0.72
CAPNS1-207ENST00000589146 KRTAP13-4Q3LI77 160 aa10.56□□□□□ -0.72
CAPNS1-207ENST00000589146 M0QZ58 72 aa10.55□□□□□ -0.72
CAPNS1-207ENST00000589146 KRTAP9-2Q9BYQ4 174 aa10.53□□□□□ -0.72
CAPNS1-207ENST00000589146 LORP23490 312 aaPredicted RBP10.45□□□□□ -0.74
CAPNS1-207ENST00000589146 LCE2AQ5TA79 106 aaPredicted RBP10.44□□□□□ -0.74
CAPNS1-207ENST00000589146 CRIPTQ9P021 101 aa10.43□□□□□ -0.74
CAPNS1-207ENST00000589146 R4GN34 69 aa10.4□□□□□ -0.74
CAPNS1-207ENST00000589146 KRTAP9-8Q9BYQ0 159 aa10.38□□□□□ -0.75
CAPNS1-207ENST00000589146 MT2AP02795 61 aa10.34□□□□□ -0.75
CAPNS1-207ENST00000589146 A0A0D9SG42 100 aa10.3□□□□□ -0.76
CAPNS1-207ENST00000589146 KRTAP9-6A0A140TA67 174 aa10.28□□□□□ -0.76
CAPNS1-207ENST00000589146 MT1FP04733 61 aa10.27□□□□□ -0.77
CAPNS1-207ENST00000589146 KRTAP10-10P60014 251 aa10.22□□□□□ -0.77
CAPNS1-207ENST00000589146 K7ERS5 55 aa10.19□□□□□ -0.78
CAPNS1-207ENST00000589146 SPRR2GQ9BYE4 73 aa10.19□□□□□ -0.78
CAPNS1-207ENST00000589146 KRTAP12-1P59990 96 aa10.18□□□□□ -0.78
CAPNS1-207ENST00000589146 A6NN06 94 aa10.17□□□□□ -0.78
CAPNS1-207ENST00000589146 PMAIP1Q13794 54 aa10.16□□□□□ -0.78
CAPNS1-207ENST00000589146 LINC01554Q52M75 96 aa10.15□□□□□ -0.78
CAPNS1-207ENST00000589146 KRTAP12-2P59991 146 aa10.13□□□□□ -0.79
CAPNS1-207ENST00000589146 KRTAP19-1Q8IUB9 90 aa10.13□□□□□ -0.79
CAPNS1-207ENST00000589146 SPINT4Q6UDR6 99 aa10.07□□□□□ -0.8
CAPNS1-207ENST00000589146 KRTAP9-3Q9BYQ3 159 aa10.02□□□□□ -0.81
CAPNS1-207ENST00000589146 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
CAPNS1-207ENST00000589146 FSIP2Q5CZC0 6907 aa9.94□□□□□ -0.82
CAPNS1-207ENST00000589146 KRTAP19-8Q3LI54 63 aa9.94□□□□□ -0.82
CAPNS1-207ENST00000589146 CRCT1Q9UGL9 99 aa9.88□□□□□ -0.83
CAPNS1-207ENST00000589146 ROMO1P60602 79 aa9.8□□□□□ -0.84
CAPNS1-207ENST00000589146 PLAC4Q8WY50 150 aa9.79□□□□□ -0.84
CAPNS1-207ENST00000589146 KTN1-AS1Q86SY8 53 aa9.78□□□□□ -0.84
CAPNS1-207ENST00000589146 MT1BP07438 61 aa9.76□□□□□ -0.85
CAPNS1-207ENST00000589146 CAMK2N1Q7Z7J9 78 aa9.73□□□□□ -0.85
CAPNS1-207ENST00000589146 SVIPQ8NHG7 77 aa9.73□□□□□ -0.85
CAPNS1-207ENST00000589146 LCE2BO14633 110 aa9.7□□□□□ -0.86
CAPNS1-207ENST00000589146 C10orf95Q9H7T3 257 aa9.64□□□□□ -0.87
CAPNS1-207ENST00000589146 PRAC1Q96KF2 57 aa9.5□□□□□ -0.89
CAPNS1-207ENST00000589146 MT1XP80297 61 aa9.44□□□□□ -0.9
CAPNS1-207ENST00000589146 KRTAP10-5P60370 271 aa9.43□□□□□ -0.9
CAPNS1-207ENST00000589146 KRTAP25-1Q3LHN0 102 aa9.41□□□□□ -0.9
CAPNS1-207ENST00000589146 USH2AO75445 5202 aa9.37□□□□□ -0.91
CAPNS1-207ENST00000589146 TNP1P09430 55 aa9.32□□□□□ -0.92
CAPNS1-207ENST00000589146 PRO2289Q9P1D8 64 aa9.32□□□□□ -0.92
CAPNS1-207ENST00000589146 SSPOA2VEC9 5147 aa9.25□□□□□ -0.93
CAPNS1-207ENST00000589146 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.22□□□□□ -0.93
CAPNS1-207ENST00000589146 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.94
CAPNS1-207ENST00000589146 KRTAP23-1A1A580 65 aa9.16□□□□□ -0.94
CAPNS1-207ENST00000589146 KRTAP19-6Q3LI70 58 aa9.14□□□□□ -0.95
CAPNS1-207ENST00000589146 PP632Q6XCG6 107 aa9.11□□□□□ -0.95
CAPNS1-207ENST00000589146 FCGBPQ9Y6R7 5405 aaPredicted RBP9.07□□□□□ -0.96
CAPNS1-207ENST00000589146 KRTAP10-7P60409 375 aaPredicted RBP9.03□□□□□ -0.96
CAPNS1-207ENST00000589146 KRTAP10-12P60413 245 aa8.98□□□□□ -0.97
CAPNS1-207ENST00000589146 LCE3AQ5TA76 89 aa8.91□□□□□ -0.98
CAPNS1-207ENST00000589146 MACF1Q9UPN3 7388 aaKnown RBP8.82□□□□□ -1
CAPNS1-207ENST00000589146 SYNE2Q8WXH0 6885 aaKnown RBP8.81□□□□□ -1
CAPNS1-207ENST00000589146 KRTAP8-1Q8IUC2 63 aa8.8□□□□□ -1
CAPNS1-207ENST00000589146 KRTAP4-8A0A0G2JLE6 195 aa8.64□□□□□ -1.03
CAPNS1-207ENST00000589146 KRTAP4-8Q9BYQ9 185 aa8.64□□□□□ -1.03
CAPNS1-207ENST00000589146 KRTAP12-3P60328 96 aa8.57□□□□□ -1.04
CAPNS1-207ENST00000589146 KRTAP19-5Q3LI72 72 aa8.52□□□□□ -1.05
CAPNS1-207ENST00000589146 KRTAP6-3Q3LI67 103 aa8.48□□□□□ -1.05
CAPNS1-207ENST00000589146 KMT2DO14686 5537 aa8.45□□□□□ -1.06
CAPNS1-207ENST00000589146 KRTAP19-7Q3SYF9 63 aa8.43□□□□□ -1.06
CAPNS1-207ENST00000589146 KRTAP15-1Q3LI76 137 aa8.42□□□□□ -1.06
CAPNS1-207ENST00000589146 NEBP20929 6669 aa8.31□□□□□ -1.08
CAPNS1-207ENST00000589146 MT1EP04732 61 aa8.28□□□□□ -1.08
CAPNS1-207ENST00000589146 MUC12Q9UKN1 5478 aa8.23□□□□□ -1.09
CAPNS1-207ENST00000589146 KRTAP19-4Q3LI73 84 aa8.16□□□□□ -1.1
CAPNS1-207ENST00000589146 SPRR5A0A1B0GTR4 108 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms