RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 H3BS24 57 aa7.63□□□□□ -1.19
RPRD1A-208ENST00000589050 KLKP1Q107X0 134 aa7.62□□□□□ -1.19
RPRD1A-208ENST00000589050 SERP2Q8N6R1 65 aa7.6□□□□□ -1.19
RPRD1A-208ENST00000589050 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
RPRD1A-208ENST00000589050 KRTAP10-6P60371 365 aaPredicted RBP7.55□□□□□ -1.2
RPRD1A-208ENST00000589050 SNURFQ9Y675 71 aa7.52□□□□□ -1.21
RPRD1A-208ENST00000589050 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
RPRD1A-208ENST00000589050 C20orf197Q8N268 126 aa7.51□□□□□ -1.21
RPRD1A-208ENST00000589050 S4R3F8 94 aa7.5□□□□□ -1.21
RPRD1A-208ENST00000589050 COX7CP15954 63 aa7.48□□□□□ -1.21
RPRD1A-208ENST00000589050 A8MUN3 132 aa7.47□□□□□ -1.21
RPRD1A-208ENST00000589050 ANAPC13Q9BS18 74 aa7.45□□□□□ -1.22
RPRD1A-208ENST00000589050 LCA10Q71F78 164 aa7.44□□□□□ -1.22
RPRD1A-208ENST00000589050 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
RPRD1A-208ENST00000589050 KRTAP9-8Q9BYQ0 159 aa7.4□□□□□ -1.22
RPRD1A-208ENST00000589050 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
RPRD1A-208ENST00000589050 MT2AP02795 61 aa7.35□□□□□ -1.23
RPRD1A-208ENST00000589050 NDUFC1O43677 76 aa7.33□□□□□ -1.24
RPRD1A-208ENST00000589050 SPANXA2-OT1Q8N9U9 137 aa7.33□□□□□ -1.24
RPRD1A-208ENST00000589050 LCE1DQ5T752 114 aa7.32□□□□□ -1.24
RPRD1A-208ENST00000589050 ACYP2P14621 99 aa7.31□□□□□ -1.24
RPRD1A-208ENST00000589050 CYSTM1Q9H1C7 97 aa7.3□□□□□ -1.24
RPRD1A-208ENST00000589050 MT1FP04733 61 aa7.29□□□□□ -1.24
RPRD1A-208ENST00000589050 KRTAP10-10P60014 251 aa7.29□□□□□ -1.24
RPRD1A-208ENST00000589050 CCDC179H3BU77 68 aa7.28□□□□□ -1.24
RPRD1A-208ENST00000589050 H7BZZ5 65 aa7.26□□□□□ -1.25
RPRD1A-208ENST00000589050 KRTAP4-7Q9BYR0 210 aa7.24□□□□□ -1.25
RPRD1A-208ENST00000589050 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
RPRD1A-208ENST00000589050 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
RPRD1A-208ENST00000589050 KRTAP9-3Q9BYQ3 159 aa7.16□□□□□ -1.26
RPRD1A-208ENST00000589050 KRTAP19-4Q3LI73 84 aa7.15□□□□□ -1.26
RPRD1A-208ENST00000589050 SPTSSBQ8NFR3 76 aa7.15□□□□□ -1.26
RPRD1A-208ENST00000589050 H0YAA0 97 aa7.14□□□□□ -1.27
RPRD1A-208ENST00000589050 COA5Q86WW8 74 aa7.12□□□□□ -1.27
RPRD1A-208ENST00000589050 KRTAP4-9Q9BYQ8 210 aa7.11□□□□□ -1.27
RPRD1A-208ENST00000589050 ADM2Q7Z4H4 148 aa7.1□□□□□ -1.27
RPRD1A-208ENST00000589050 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
RPRD1A-208ENST00000589050 KRTAP9-7A8MTY7 169 aa7.05□□□□□ -1.28
RPRD1A-208ENST00000589050 TMEM258P61165 79 aa7.02□□□□□ -1.29
RPRD1A-208ENST00000589050 CRIPTQ9P021 101 aa7□□□□□ -1.29
RPRD1A-208ENST00000589050 P0C880 135 aa6.99□□□□□ -1.29
RPRD1A-208ENST00000589050 SPRR2GQ9BYE4 73 aa6.96□□□□□ -1.3
RPRD1A-208ENST00000589050 PCP4P48539 62 aa6.93□□□□□ -1.3
RPRD1A-208ENST00000589050 KRTAP4-2Q9BYR5 136 aa6.93□□□□□ -1.3
RPRD1A-208ENST00000589050 USH2AO75445 5202 aa6.91□□□□□ -1.3
RPRD1A-208ENST00000589050 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
RPRD1A-208ENST00000589050 R4GN34 69 aa6.88□□□□□ -1.31
RPRD1A-208ENST00000589050 KRTAP4-11Q9BYQ6 195 aa6.86□□□□□ -1.31
RPRD1A-208ENST00000589050 M0QZ58 72 aa6.85□□□□□ -1.31
RPRD1A-208ENST00000589050 SEC61GP60059 68 aa6.85□□□□□ -1.31
RPRD1A-208ENST00000589050 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
RPRD1A-208ENST00000589050 Q5VV11 94 aa6.84□□□□□ -1.31
RPRD1A-208ENST00000589050 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.32
RPRD1A-208ENST00000589050 SERP1Q9Y6X1 66 aa6.83□□□□□ -1.32
RPRD1A-208ENST00000589050 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
RPRD1A-208ENST00000589050 MT1BP07438 61 aa6.8□□□□□ -1.32
RPRD1A-208ENST00000589050 A0A1B0GU69 56 aa6.75□□□□□ -1.33
RPRD1A-208ENST00000589050 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
RPRD1A-208ENST00000589050 LINC01554Q52M75 96 aa6.74□□□□□ -1.33
RPRD1A-208ENST00000589050 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
RPRD1A-208ENST00000589050 A0A1B0GU33 70 aa6.69□□□□□ -1.34
RPRD1A-208ENST00000589050 LINC01558Q9Y6Z2 57 aa6.69□□□□□ -1.34
RPRD1A-208ENST00000589050 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
RPRD1A-208ENST00000589050 PRR15LQ9BU68 103 aa6.67□□□□□ -1.34
RPRD1A-208ENST00000589050 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
RPRD1A-208ENST00000589050 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
RPRD1A-208ENST00000589050 A6NN06 94 aa6.57□□□□□ -1.36
RPRD1A-208ENST00000589050 KRTAP10-5P60370 271 aa6.56□□□□□ -1.36
RPRD1A-208ENST00000589050 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
RPRD1A-208ENST00000589050 V9GYY9 64 aa6.56□□□□□ -1.36
RPRD1A-208ENST00000589050 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
RPRD1A-208ENST00000589050 A0A0D9SG42 100 aa6.55□□□□□ -1.36
RPRD1A-208ENST00000589050 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
RPRD1A-208ENST00000589050 Q1T7F1 81 aa6.53□□□□□ -1.36
RPRD1A-208ENST00000589050 MT1XP80297 61 aa6.48□□□□□ -1.37
RPRD1A-208ENST00000589050 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
RPRD1A-208ENST00000589050 PSPHP1O15172 72 aa6.47□□□□□ -1.37
RPRD1A-208ENST00000589050 A8MU10 97 aa6.45□□□□□ -1.38
RPRD1A-208ENST00000589050 UQCR11O14957 56 aa6.45□□□□□ -1.38
RPRD1A-208ENST00000589050 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
RPRD1A-208ENST00000589050 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
RPRD1A-208ENST00000589050 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.38
RPRD1A-208ENST00000589050 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
RPRD1A-208ENST00000589050 MIR22HGQ0VDD5 57 aa6.35□□□□□ -1.39
RPRD1A-208ENST00000589050 A6NED7 52 aa6.28□□□□□ -1.4
RPRD1A-208ENST00000589050 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
RPRD1A-208ENST00000589050 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
RPRD1A-208ENST00000589050 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
RPRD1A-208ENST00000589050 K7ERS5 55 aa6.16□□□□□ -1.42
RPRD1A-208ENST00000589050 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
RPRD1A-208ENST00000589050 KRTAP6-3Q3LI67 103 aa6.11□□□□□ -1.43
RPRD1A-208ENST00000589050 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
RPRD1A-208ENST00000589050 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
RPRD1A-208ENST00000589050 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
RPRD1A-208ENST00000589050 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
RPRD1A-208ENST00000589050 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
RPRD1A-208ENST00000589050 TNP1P09430 55 aa6□□□□□ -1.45
RPRD1A-208ENST00000589050 KMT2DO14686 5537 aa6□□□□□ -1.45
RPRD1A-208ENST00000589050 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
RPRD1A-208ENST00000589050 SPRR2FQ96RM1 72 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 1930.2 ms