RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
SCAMP4-211ENST00000588907 LCA10Q71F78 164 aa8.23□□□□□ -1.09
SCAMP4-211ENST00000588907 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
SCAMP4-211ENST00000588907 ATP5EP56381 51 aaPredicted RBP8.18□□□□□ -1.1
SCAMP4-211ENST00000588907 KRTAP10-6P60371 365 aaPredicted RBP8.17□□□□□ -1.1
SCAMP4-211ENST00000588907 CHKB-CPT1BH3BT56 60 aa8.13□□□□□ -1.11
SCAMP4-211ENST00000588907 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
SCAMP4-211ENST00000588907 SPTSSBQ8NFR3 76 aa8.13□□□□□ -1.11
SCAMP4-211ENST00000588907 TMEM258P61165 79 aa8.12□□□□□ -1.11
SCAMP4-211ENST00000588907 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
SCAMP4-211ENST00000588907 COA5Q86WW8 74 aa8.05□□□□□ -1.12
SCAMP4-211ENST00000588907 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.13
SCAMP4-211ENST00000588907 H0YAA0 97 aa8□□□□□ -1.13
SCAMP4-211ENST00000588907 MT2AP02795 61 aa7.97□□□□□ -1.13
SCAMP4-211ENST00000588907 KRTAP10-10P60014 251 aa7.93□□□□□ -1.14
SCAMP4-211ENST00000588907 MT1FP04733 61 aa7.9□□□□□ -1.14
SCAMP4-211ENST00000588907 ADM2Q7Z4H4 148 aa7.86□□□□□ -1.15
SCAMP4-211ENST00000588907 SERP1Q9Y6X1 66 aa7.85□□□□□ -1.15
SCAMP4-211ENST00000588907 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
SCAMP4-211ENST00000588907 SEC61GP60059 68 aa7.8□□□□□ -1.16
SCAMP4-211ENST00000588907 LCE2DQ5TA82 110 aaPredicted RBP7.79□□□□□ -1.16
SCAMP4-211ENST00000588907 KRTAP9-3Q9BYQ3 159 aa7.76□□□□□ -1.17
SCAMP4-211ENST00000588907 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
SCAMP4-211ENST00000588907 P0C880 135 aa7.71□□□□□ -1.18
SCAMP4-211ENST00000588907 RPS28P62857 69 aaKnown RBP7.69□□□□□ -1.18
SCAMP4-211ENST00000588907 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
SCAMP4-211ENST00000588907 R4GN34 69 aa7.67□□□□□ -1.18
SCAMP4-211ENST00000588907 A0A1B0GU69 56 aa7.66□□□□□ -1.18
SCAMP4-211ENST00000588907 PRR15LQ9BU68 103 aa7.66□□□□□ -1.18
SCAMP4-211ENST00000588907 KRTAP9-2Q9BYQ4 174 aa7.65□□□□□ -1.18
SCAMP4-211ENST00000588907 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
SCAMP4-211ENST00000588907 KRTAP19-1Q8IUB9 90 aa7.62□□□□□ -1.19
SCAMP4-211ENST00000588907 V9GYY9 64 aa7.62□□□□□ -1.19
SCAMP4-211ENST00000588907 M0QZ58 72 aa7.61□□□□□ -1.19
SCAMP4-211ENST00000588907 SMIM26A0A096LP01 95 aa7.59□□□□□ -1.19
SCAMP4-211ENST00000588907 LCE2BO14633 110 aa7.57□□□□□ -1.2
SCAMP4-211ENST00000588907 A0A1B0GU33 70 aa7.54□□□□□ -1.2
SCAMP4-211ENST00000588907 Q1T7F1 81 aa7.53□□□□□ -1.2
SCAMP4-211ENST00000588907 Q5VV11 94 aa7.53□□□□□ -1.2
SCAMP4-211ENST00000588907 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.21
SCAMP4-211ENST00000588907 USH2AO75445 5202 aa7.49□□□□□ -1.21
SCAMP4-211ENST00000588907 FSIP2Q5CZC0 6907 aa7.45□□□□□ -1.22
SCAMP4-211ENST00000588907 LINC01554Q52M75 96 aa7.43□□□□□ -1.22
SCAMP4-211ENST00000588907 A6NN06 94 aa7.4□□□□□ -1.22
SCAMP4-211ENST00000588907 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
SCAMP4-211ENST00000588907 MT1BP07438 61 aa7.39□□□□□ -1.23
SCAMP4-211ENST00000588907 UQCR11O14957 56 aa7.38□□□□□ -1.23
SCAMP4-211ENST00000588907 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
SCAMP4-211ENST00000588907 PSPHP1O15172 72 aa7.36□□□□□ -1.23
SCAMP4-211ENST00000588907 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
SCAMP4-211ENST00000588907 CRCT1Q9UGL9 99 aa7.34□□□□□ -1.23
SCAMP4-211ENST00000588907 SSPOA2VEC9 5147 aa7.3□□□□□ -1.24
SCAMP4-211ENST00000588907 KRTAP19-6Q3LI70 58 aa7.28□□□□□ -1.24
SCAMP4-211ENST00000588907 A0A0D9SG42 100 aa7.27□□□□□ -1.25
SCAMP4-211ENST00000588907 MIR22HGQ0VDD5 57 aa7.23□□□□□ -1.25
SCAMP4-211ENST00000588907 KRTAP9-6A0A140TA67 174 aa7.22□□□□□ -1.25
SCAMP4-211ENST00000588907 A6NED7 52 aa7.2□□□□□ -1.26
SCAMP4-211ENST00000588907 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
SCAMP4-211ENST00000588907 A8MU10 97 aa7.18□□□□□ -1.26
SCAMP4-211ENST00000588907 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
SCAMP4-211ENST00000588907 KRTAP12-1P59990 96 aa7.15□□□□□ -1.26
SCAMP4-211ENST00000588907 KRTAP10-5P60370 271 aa7.15□□□□□ -1.26
SCAMP4-211ENST00000588907 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
SCAMP4-211ENST00000588907 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
SCAMP4-211ENST00000588907 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.28
SCAMP4-211ENST00000588907 K7ERS5 55 aa7.08□□□□□ -1.28
SCAMP4-211ENST00000588907 MT1XP80297 61 aa7.08□□□□□ -1.28
SCAMP4-211ENST00000588907 CDC42SE1Q9NRR8 79 aa7.02□□□□□ -1.29
SCAMP4-211ENST00000588907 MACF1Q9UPN3 7388 aaKnown RBP6.88□□□□□ -1.31
SCAMP4-211ENST00000588907 BRK1Q8WUW1 75 aa6.87□□□□□ -1.31
SCAMP4-211ENST00000588907 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
SCAMP4-211ENST00000588907 KRTAP10-12P60413 245 aa6.76□□□□□ -1.33
SCAMP4-211ENST00000588907 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
SCAMP4-211ENST00000588907 TNP1P09430 55 aa6.74□□□□□ -1.33
SCAMP4-211ENST00000588907 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
SCAMP4-211ENST00000588907 SYNE2Q8WXH0 6885 aaKnown RBP6.7□□□□□ -1.34
SCAMP4-211ENST00000588907 KRTAP25-1Q3LHN0 102 aa6.65□□□□□ -1.34
SCAMP4-211ENST00000588907 ROMO1P60602 79 aa6.63□□□□□ -1.35
SCAMP4-211ENST00000588907 KMT2DO14686 5537 aa6.63□□□□□ -1.35
SCAMP4-211ENST00000588907 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
SCAMP4-211ENST00000588907 PRO0628Q9UI54 55 aa6.59□□□□□ -1.35
SCAMP4-211ENST00000588907 KRTAP9-7A8MTY7 169 aa6.56□□□□□ -1.36
SCAMP4-211ENST00000588907 KRTAP6-3Q3LI67 103 aa6.56□□□□□ -1.36
SCAMP4-211ENST00000588907 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
SCAMP4-211ENST00000588907 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
SCAMP4-211ENST00000588907 PMAIP1Q13794 54 aa6.5□□□□□ -1.37
SCAMP4-211ENST00000588907 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
SCAMP4-211ENST00000588907 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
SCAMP4-211ENST00000588907 LCE3AQ5TA76 89 aa6.43□□□□□ -1.38
SCAMP4-211ENST00000588907 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
SCAMP4-211ENST00000588907 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
SCAMP4-211ENST00000588907 MUC12Q9UKN1 5478 aa6.35□□□□□ -1.39
SCAMP4-211ENST00000588907 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
SCAMP4-211ENST00000588907 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
SCAMP4-211ENST00000588907 NEBP20929 6669 aa6.27□□□□□ -1.41
SCAMP4-211ENST00000588907 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
SCAMP4-211ENST00000588907 MT1EP04732 61 aa6.25□□□□□ -1.41
SCAMP4-211ENST00000588907 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
SCAMP4-211ENST00000588907 SPRR2EP22531 72 aa6.19□□□□□ -1.42
SCAMP4-211ENST00000588907 SPRR2BP35325 72 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms