RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 FBN3Q75N90 2809 aa2.02□□□□□ -2.09
VMP1-208ENST00000588617 TOMM7Q9P0U1 55 aa2.02□□□□□ -2.09
VMP1-208ENST00000588617 H0YGX0 51 aa2.01□□□□□ -2.09
VMP1-208ENST00000588617 LINC00158P58513 81 aa2.01□□□□□ -2.09
VMP1-208ENST00000588617 ATXN8Q156A1 80 aa2.01□□□□□ -2.09
VMP1-208ENST00000588617 Q5VV11 94 aa2.01□□□□□ -2.09
VMP1-208ENST00000588617 CLPSL2Q6UWE3 100 aa2.01□□□□□ -2.09
VMP1-208ENST00000588617 APLNQ9ULZ1 77 aa2.01□□□□□ -2.09
VMP1-208ENST00000588617 C6orf48Q9UBA6 75 aa1.99□□□□□ -2.09
VMP1-208ENST00000588617 SACSQ9NZJ4 4579 aa1.99□□□□□ -2.09
VMP1-208ENST00000588617 TENM2Q9NT68 2774 aa1.98□□□□□ -2.09
VMP1-208ENST00000588617 DNAH17Q9UFH2 4485 aa1.98□□□□□ -2.09
VMP1-208ENST00000588617 UBE2DNLQ8IWF7 75 aa1.98□□□□□ -2.09
VMP1-208ENST00000588617 DNAH5Q8TE73 4624 aa1.98□□□□□ -2.09
VMP1-208ENST00000588617 DNAH11Q96DT5 4516 aa1.97□□□□□ -2.09
VMP1-208ENST00000588617 hADV29S1A0JD25 119 aa1.97□□□□□ -2.09
VMP1-208ENST00000588617 ETDBQ3ZM63 59 aa1.97□□□□□ -2.09
VMP1-208ENST00000588617 CRCT1Q9UGL9 99 aa1.97□□□□□ -2.09
VMP1-208ENST00000588617 DNAH6Q9C0G6 4158 aa1.96□□□□□ -2.1
VMP1-208ENST00000588617 WFDC2Q14508 124 aa1.96□□□□□ -2.1
VMP1-208ENST00000588617 KCNQ1DNQ9H478 68 aa1.96□□□□□ -2.1
VMP1-208ENST00000588617 KMT2AQ03164 3969 aa1.96□□□□□ -2.1
VMP1-208ENST00000588617 HECTD4Q9Y4D8 3996 aa1.96□□□□□ -2.1
VMP1-208ENST00000588617 KMT2CQ8NEZ4 4911 aaKnown RBP1.95□□□□□ -2.1
VMP1-208ENST00000588617 DNAH8Q96JB1 4490 aa1.95□□□□□ -2.1
VMP1-208ENST00000588617 RYR2Q92736 4967 aa1.95□□□□□ -2.1
VMP1-208ENST00000588617 TRAV22A0A0B4J277 110 aa1.95□□□□□ -2.1
VMP1-208ENST00000588617 ACYP1P07311 99 aa1.95□□□□□ -2.1
VMP1-208ENST00000588617 C10orf95Q9H7T3 257 aa1.95□□□□□ -2.1
VMP1-208ENST00000588617 FAT2Q9NYQ8 4349 aa1.95□□□□□ -2.1
VMP1-208ENST00000588617 ALMS1Q8TCU4 4167 aa1.95□□□□□ -2.1
VMP1-208ENST00000588617 SPRR1AP35321 89 aa1.94□□□□□ -2.1
VMP1-208ENST00000588617 HYDINQ4G0P3 5121 aa1.93□□□□□ -2.1
VMP1-208ENST00000588617 UQCR11O14957 56 aa1.93□□□□□ -2.1
VMP1-208ENST00000588617 MT-ATP8P03928 68 aa1.93□□□□□ -2.1
VMP1-208ENST00000588617 COX7BP24311 80 aa1.93□□□□□ -2.1
VMP1-208ENST00000588617 FRAS1Q86XX4 4008 aa1.93□□□□□ -2.1
VMP1-208ENST00000588617 LRP1BQ9NZR2 4599 aa1.93□□□□□ -2.1
VMP1-208ENST00000588617 TGP01266 2768 aa1.93□□□□□ -2.1
VMP1-208ENST00000588617 DYNC1H1Q14204 4646 aaKnown RBP1.92□□□□□ -2.1
VMP1-208ENST00000588617 RYR3Q15413 4870 aa1.92□□□□□ -2.1
VMP1-208ENST00000588617 IGLV5-48A0A075B6I7 105 aa1.91□□□□□ -2.1
VMP1-208ENST00000588617 A0A096LNI7 61 aa1.91□□□□□ -2.1
VMP1-208ENST00000588617 ETDCA0A1B0GVM5 59 aa1.91□□□□□ -2.1
VMP1-208ENST00000588617 PKD1P98161 4303 aa1.91□□□□□ -2.1
VMP1-208ENST00000588617 TRBV7-4A0A0J9YYF1 115 aa1.9□□□□□ -2.11
VMP1-208ENST00000588617 ATP5EP2Q5VTU8 51 aa1.9□□□□□ -2.11
VMP1-208ENST00000588617 LINC00643Q86TS7 51 aa1.9□□□□□ -2.11
VMP1-208ENST00000588617 LINC01558Q9Y6Z2 57 aa1.9□□□□□ -2.11
VMP1-208ENST00000588617 TRBV7-7A0A0K0K1E9 115 aa1.89□□□□□ -2.11
VMP1-208ENST00000588617 SPRR1BP22528 89 aa1.89□□□□□ -2.11
VMP1-208ENST00000588617 Q6JHZ5 121 aa1.89□□□□□ -2.11
VMP1-208ENST00000588617 PLAC8Q9NZF1 115 aa1.89□□□□□ -2.11
VMP1-208ENST00000588617 APOBP04114 4563 aaKnown RBP1.89□□□□□ -2.11
VMP1-208ENST00000588617 PKHD1P08F94 4074 aa1.88□□□□□ -2.11
VMP1-208ENST00000588617 BCE1O60756 84 aa1.88□□□□□ -2.11
VMP1-208ENST00000588617 UBL5Q9BZL1 73 aa1.88□□□□□ -2.11
VMP1-208ENST00000588617 LCE6AA0A183 80 aa1.87□□□□□ -2.11
VMP1-208ENST00000588617 F8WEM9 126 aa1.87□□□□□ -2.11
VMP1-208ENST00000588617 SPINK7P58062 85 aa1.87□□□□□ -2.11
VMP1-208ENST00000588617 SPRR4Q96PI1 79 aa1.87□□□□□ -2.11
VMP1-208ENST00000588617 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
VMP1-208ENST00000588617 FAT1Q14517 4588 aa1.86□□□□□ -2.11
VMP1-208ENST00000588617 LINC00846Q9NV44 126 aa1.86□□□□□ -2.11
VMP1-208ENST00000588617 RYR1P21817 5038 aa1.86□□□□□ -2.11
VMP1-208ENST00000588617 VPS13BQ7Z7G8 4022 aa1.85□□□□□ -2.11
VMP1-208ENST00000588617 PRLHP81277 87 aa1.85□□□□□ -2.11
VMP1-208ENST00000588617 SRRM2Q9UQ35 2752 aaKnown RBP1.84□□□□□ -2.11
VMP1-208ENST00000588617 ATOX1O00244 68 aa1.83□□□□□ -2.12
VMP1-208ENST00000588617 NREPQ16612 68 aa1.83□□□□□ -2.12
VMP1-208ENST00000588617 DEFB105AQ8NG35 78 aa1.83□□□□□ -2.12
VMP1-208ENST00000588617 HAMPP81172 84 aa1.82□□□□□ -2.12
VMP1-208ENST00000588617 SPATA8Q6RVD6 105 aa1.82□□□□□ -2.12
VMP1-208ENST00000588617 SSBP3-AS1Q7Z2R9 100 aa1.82□□□□□ -2.12
VMP1-208ENST00000588617 EPPK1P58107 5090 aaKnown RBP1.8□□□□□ -2.12
VMP1-208ENST00000588617 NDUFC1O43677 76 aa1.8□□□□□ -2.12
VMP1-208ENST00000588617 RPS29P62273 56 aaKnown RBP1.8□□□□□ -2.12
VMP1-208ENST00000588617 SPINK6Q6UWN8 80 aa1.8□□□□□ -2.12
VMP1-208ENST00000588617 SERP2Q8N6R1 65 aa1.8□□□□□ -2.12
VMP1-208ENST00000588617 LINC00472Q9H8W2 130 aa1.8□□□□□ -2.12
VMP1-208ENST00000588617 HSPG2P98160 4391 aa1.79□□□□□ -2.12
VMP1-208ENST00000588617 A0A087WVE0 104 aa1.79□□□□□ -2.12
VMP1-208ENST00000588617 PKHD1L1Q86WI1 4243 aa1.79□□□□□ -2.12
VMP1-208ENST00000588617 KIAA1109Q2LD37 5005 aa1.79□□□□□ -2.12
VMP1-208ENST00000588617 FAT3Q8TDW7 4589 aa1.78□□□□□ -2.12
VMP1-208ENST00000588617 NDUFB1O75438 58 aa1.78□□□□□ -2.12
VMP1-208ENST00000588617 BIRC6Q9NR09 4857 aa1.78□□□□□ -2.12
VMP1-208ENST00000588617 HERC2O95714 4834 aa1.77□□□□□ -2.13
VMP1-208ENST00000588617 K7EQZ3 153 aa1.77□□□□□ -2.13
VMP1-208ENST00000588617 SPINK1P00995 79 aa1.77□□□□□ -2.13
VMP1-208ENST00000588617 MYCBP2O75592 4640 aa1.77□□□□□ -2.13
VMP1-208ENST00000588617 TP53AIP1Q9HCN2 124 aa1.76□□□□□ -2.13
VMP1-208ENST00000588617 LRP1Q07954 4544 aaKnown RBP1.76□□□□□ -2.13
VMP1-208ENST00000588617 MMP24-AS1A0A0U1RRL7 71 aa1.74□□□□□ -2.13
VMP1-208ENST00000588617 TNXBP22105 4242 aa1.74□□□□□ -2.13
VMP1-208ENST00000588617 ABCA13Q86UQ4 5058 aa1.73□□□□□ -2.13
VMP1-208ENST00000588617 H7BZZ5 65 aa1.72□□□□□ -2.13
VMP1-208ENST00000588617 SMR3BP02814 79 aaPredicted RBP1.72□□□□□ -2.13
VMP1-208ENST00000588617 Q5VSD8 79 aa1.72□□□□□ -2.13
VMP1-208ENST00000588617 WFDC13Q8IUB5 93 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms