RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SERP2Q8N6R1 65 aa4.41□□□□□ -1.7
CIRBP-218ENST00000588344 S4R3F8 94 aa4.39□□□□□ -1.71
CIRBP-218ENST00000588344 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
CIRBP-218ENST00000588344 CSAG1Q6PB30 78 aa4.37□□□□□ -1.71
CIRBP-218ENST00000588344 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
CIRBP-218ENST00000588344 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
CIRBP-218ENST00000588344 KRTAP19-1Q8IUB9 90 aa4.36□□□□□ -1.71
CIRBP-218ENST00000588344 C20orf197Q8N268 126 aa4.35□□□□□ -1.71
CIRBP-218ENST00000588344 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
CIRBP-218ENST00000588344 COX7CP15954 63 aa4.34□□□□□ -1.71
CIRBP-218ENST00000588344 LCA10Q71F78 164 aa4.34□□□□□ -1.71
CIRBP-218ENST00000588344 NDUFC1O43677 76 aa4.33□□□□□ -1.72
CIRBP-218ENST00000588344 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
CIRBP-218ENST00000588344 SNURFQ9Y675 71 aa4.32□□□□□ -1.72
CIRBP-218ENST00000588344 ACYP2P14621 99 aa4.31□□□□□ -1.72
CIRBP-218ENST00000588344 SPANXA2-OT1Q8N9U9 137 aa4.31□□□□□ -1.72
CIRBP-218ENST00000588344 MT2AP02795 61 aa4.3□□□□□ -1.72
CIRBP-218ENST00000588344 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
CIRBP-218ENST00000588344 ANAPC13Q9BS18 74 aa4.3□□□□□ -1.72
CIRBP-218ENST00000588344 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
CIRBP-218ENST00000588344 MT1FP04733 61 aa4.25□□□□□ -1.73
CIRBP-218ENST00000588344 SPTSSBQ8NFR3 76 aa4.25□□□□□ -1.73
CIRBP-218ENST00000588344 H0YAA0 97 aa4.24□□□□□ -1.73
CIRBP-218ENST00000588344 CHKB-CPT1BH3BT56 60 aa4.22□□□□□ -1.73
CIRBP-218ENST00000588344 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
CIRBP-218ENST00000588344 H7BZZ5 65 aa4.2□□□□□ -1.74
CIRBP-218ENST00000588344 CRIPTQ9P021 101 aa4.19□□□□□ -1.74
CIRBP-218ENST00000588344 CCDC179H3BU77 68 aa4.15□□□□□ -1.75
CIRBP-218ENST00000588344 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.75
CIRBP-218ENST00000588344 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
CIRBP-218ENST00000588344 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
CIRBP-218ENST00000588344 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
CIRBP-218ENST00000588344 COA5Q86WW8 74 aa4.13□□□□□ -1.75
CIRBP-218ENST00000588344 KRTAP4-7Q9BYR0 210 aa4.13□□□□□ -1.75
CIRBP-218ENST00000588344 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
CIRBP-218ENST00000588344 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
CIRBP-218ENST00000588344 USH2AO75445 5202 aa4.1□□□□□ -1.75
CIRBP-218ENST00000588344 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
CIRBP-218ENST00000588344 TMEM258P61165 79 aa4.08□□□□□ -1.76
CIRBP-218ENST00000588344 SEC61GP60059 68 aa4.06□□□□□ -1.76
CIRBP-218ENST00000588344 R4GN34 69 aa4.06□□□□□ -1.76
CIRBP-218ENST00000588344 P0C880 135 aa4.05□□□□□ -1.76
CIRBP-218ENST00000588344 Q5VV11 94 aa4.05□□□□□ -1.76
CIRBP-218ENST00000588344 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
CIRBP-218ENST00000588344 SERP1Q9Y6X1 66 aa4.03□□□□□ -1.76
CIRBP-218ENST00000588344 M0QZ58 72 aa4.02□□□□□ -1.77
CIRBP-218ENST00000588344 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
CIRBP-218ENST00000588344 SSPOA2VEC9 5147 aa4□□□□□ -1.77
CIRBP-218ENST00000588344 LCE4AQ5TA78 99 aa4□□□□□ -1.77
CIRBP-218ENST00000588344 SVIPQ8NHG7 77 aa4□□□□□ -1.77
CIRBP-218ENST00000588344 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
CIRBP-218ENST00000588344 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
CIRBP-218ENST00000588344 MT1BP07438 61 aa3.97□□□□□ -1.77
CIRBP-218ENST00000588344 A0A1B0GU69 56 aa3.95□□□□□ -1.78
CIRBP-218ENST00000588344 PCP4P48539 62 aa3.95□□□□□ -1.78
CIRBP-218ENST00000588344 PLAC4Q8WY50 150 aa3.95□□□□□ -1.78
CIRBP-218ENST00000588344 A0A1B0GU33 70 aa3.93□□□□□ -1.78
CIRBP-218ENST00000588344 PRR15LQ9BU68 103 aa3.93□□□□□ -1.78
CIRBP-218ENST00000588344 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
CIRBP-218ENST00000588344 A6NN06 94 aa3.91□□□□□ -1.78
CIRBP-218ENST00000588344 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
CIRBP-218ENST00000588344 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
CIRBP-218ENST00000588344 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
CIRBP-218ENST00000588344 KRTAP9-7A8MTY7 169 aa3.87□□□□□ -1.79
CIRBP-218ENST00000588344 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
CIRBP-218ENST00000588344 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
CIRBP-218ENST00000588344 V9GYY9 64 aa3.87□□□□□ -1.79
CIRBP-218ENST00000588344 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
CIRBP-218ENST00000588344 SMIM26A0A096LP01 95 aa3.84□□□□□ -1.79
CIRBP-218ENST00000588344 RPS28P62857 69 aaKnown RBP3.84□□□□□ -1.79
CIRBP-218ENST00000588344 SPATA8Q6RVD6 105 aa3.82□□□□□ -1.8
CIRBP-218ENST00000588344 Q1T7F1 81 aa3.81□□□□□ -1.8
CIRBP-218ENST00000588344 A0A0D9SG42 100 aa3.79□□□□□ -1.8
CIRBP-218ENST00000588344 UQCR11O14957 56 aa3.79□□□□□ -1.8
CIRBP-218ENST00000588344 MT1XP80297 61 aa3.78□□□□□ -1.8
CIRBP-218ENST00000588344 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
CIRBP-218ENST00000588344 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
CIRBP-218ENST00000588344 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
CIRBP-218ENST00000588344 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
CIRBP-218ENST00000588344 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
CIRBP-218ENST00000588344 A8MU10 97 aa3.71□□□□□ -1.82
CIRBP-218ENST00000588344 PSPHP1O15172 72 aa3.71□□□□□ -1.82
CIRBP-218ENST00000588344 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
CIRBP-218ENST00000588344 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
CIRBP-218ENST00000588344 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
CIRBP-218ENST00000588344 H3BS24 57 aa3.65□□□□□ -1.83
CIRBP-218ENST00000588344 K7ERS5 55 aa3.65□□□□□ -1.83
CIRBP-218ENST00000588344 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.83
CIRBP-218ENST00000588344 A6NED7 52 aa3.64□□□□□ -1.83
CIRBP-218ENST00000588344 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
CIRBP-218ENST00000588344 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.83
CIRBP-218ENST00000588344 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
CIRBP-218ENST00000588344 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
CIRBP-218ENST00000588344 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
CIRBP-218ENST00000588344 KMT2DO14686 5537 aa3.56□□□□□ -1.84
CIRBP-218ENST00000588344 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
CIRBP-218ENST00000588344 TNP1P09430 55 aa3.55□□□□□ -1.84
CIRBP-218ENST00000588344 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
CIRBP-218ENST00000588344 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
CIRBP-218ENST00000588344 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms