RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 MT1FP04733 61 aa4.85□□□□□ -1.63
TPM4-207ENST00000588032 CYP4F30PQ9H0H9 118 aa4.84□□□□□ -1.63
TPM4-207ENST00000588032 LOC101927531A0A1B0GV80 90 aa4.83□□□□□ -1.64
TPM4-207ENST00000588032 C1orf64Q8NEQ6 169 aa4.83□□□□□ -1.64
TPM4-207ENST00000588032 ATOX1O00244 68 aa4.82□□□□□ -1.64
TPM4-207ENST00000588032 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
TPM4-207ENST00000588032 A0A087WVE0 104 aa4.8□□□□□ -1.64
TPM4-207ENST00000588032 H0Y9P7 68 aa4.78□□□□□ -1.64
TPM4-207ENST00000588032 S4R3F8 94 aa4.77□□□□□ -1.65
TPM4-207ENST00000588032 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
TPM4-207ENST00000588032 C5orf47Q569G3 176 aa4.75□□□□□ -1.65
TPM4-207ENST00000588032 OCR1Q9BZK8 76 aa4.75□□□□□ -1.65
TPM4-207ENST00000588032 MP68P56378 58 aa4.74□□□□□ -1.65
TPM4-207ENST00000588032 LCA10Q71F78 164 aa4.73□□□□□ -1.65
TPM4-207ENST00000588032 LINC00208Q96KT6 92 aa4.73□□□□□ -1.65
TPM4-207ENST00000588032 K7ERU9 68 aa4.72□□□□□ -1.65
TPM4-207ENST00000588032 SCGB1A1P11684 91 aa4.72□□□□□ -1.65
TPM4-207ENST00000588032 IMUPQ9GZP8 106 aa4.72□□□□□ -1.65
TPM4-207ENST00000588032 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
TPM4-207ENST00000588032 H3BPC8 53 aa4.71□□□□□ -1.66
TPM4-207ENST00000588032 A8MUN3 132 aa4.69□□□□□ -1.66
TPM4-207ENST00000588032 FAM236AA0A1B0GUQ0 79 aa4.67□□□□□ -1.66
TPM4-207ENST00000588032 FAM236BA0A1B0GV22 79 aa4.67□□□□□ -1.66
TPM4-207ENST00000588032 KLKP1Q107X0 134 aa4.66□□□□□ -1.66
TPM4-207ENST00000588032 NDUFC1O43677 76 aa4.65□□□□□ -1.67
TPM4-207ENST00000588032 USH2AO75445 5202 aa4.64□□□□□ -1.67
TPM4-207ENST00000588032 MT-ATP8P03928 68 aa4.63□□□□□ -1.67
TPM4-207ENST00000588032 SMIM20Q8N5G0 67 aa4.63□□□□□ -1.67
TPM4-207ENST00000588032 TRAV7A0A075B6U4 112 aa4.59□□□□□ -1.67
TPM4-207ENST00000588032 H0YAA0 97 aa4.59□□□□□ -1.67
TPM4-207ENST00000588032 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
TPM4-207ENST00000588032 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
TPM4-207ENST00000588032 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
TPM4-207ENST00000588032 DMAC1Q96GE9 116 aa4.57□□□□□ -1.68
TPM4-207ENST00000588032 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
TPM4-207ENST00000588032 Q5VV11 94 aa4.53□□□□□ -1.68
TPM4-207ENST00000588032 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
TPM4-207ENST00000588032 ACYP2P14621 99 aa4.5□□□□□ -1.69
TPM4-207ENST00000588032 ADM2Q7Z4H4 148 aa4.5□□□□□ -1.69
TPM4-207ENST00000588032 MT1BP07438 61 aa4.49□□□□□ -1.69
TPM4-207ENST00000588032 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
TPM4-207ENST00000588032 SERP2Q8N6R1 65 aa4.47□□□□□ -1.69
TPM4-207ENST00000588032 C20orf197Q8N268 126 aa4.46□□□□□ -1.7
TPM4-207ENST00000588032 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
TPM4-207ENST00000588032 SNURFQ9Y675 71 aa4.45□□□□□ -1.7
TPM4-207ENST00000588032 A6NN06 94 aa4.43□□□□□ -1.7
TPM4-207ENST00000588032 SPANXA2-OT1Q8N9U9 137 aa4.43□□□□□ -1.7
TPM4-207ENST00000588032 CHKB-CPT1BH3BT56 60 aa4.41□□□□□ -1.7
TPM4-207ENST00000588032 SVIPQ8NHG7 77 aa4.41□□□□□ -1.7
TPM4-207ENST00000588032 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
TPM4-207ENST00000588032 R4GN34 69 aa4.4□□□□□ -1.71
TPM4-207ENST00000588032 P0C880 135 aa4.39□□□□□ -1.71
TPM4-207ENST00000588032 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
TPM4-207ENST00000588032 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
TPM4-207ENST00000588032 COX7CP15954 63 aa4.36□□□□□ -1.71
TPM4-207ENST00000588032 M0QZ58 72 aa4.35□□□□□ -1.71
TPM4-207ENST00000588032 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
TPM4-207ENST00000588032 PCP4P48539 62 aa4.32□□□□□ -1.72
TPM4-207ENST00000588032 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
TPM4-207ENST00000588032 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
TPM4-207ENST00000588032 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
TPM4-207ENST00000588032 LINC01554Q52M75 96 aa4.27□□□□□ -1.73
TPM4-207ENST00000588032 COA5Q86WW8 74 aa4.27□□□□□ -1.73
TPM4-207ENST00000588032 H7BZZ5 65 aa4.26□□□□□ -1.73
TPM4-207ENST00000588032 ANAPC13Q9BS18 74 aa4.25□□□□□ -1.73
TPM4-207ENST00000588032 MT1XP80297 61 aa4.23□□□□□ -1.73
TPM4-207ENST00000588032 SEC61GP60059 68 aa4.21□□□□□ -1.74
TPM4-207ENST00000588032 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.74
TPM4-207ENST00000588032 SERP1Q9Y6X1 66 aa4.19□□□□□ -1.74
TPM4-207ENST00000588032 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
TPM4-207ENST00000588032 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
TPM4-207ENST00000588032 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
TPM4-207ENST00000588032 CCDC179H3BU77 68 aa4.13□□□□□ -1.75
TPM4-207ENST00000588032 ATP5EP56381 51 aaPredicted RBP4.12□□□□□ -1.75
TPM4-207ENST00000588032 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
TPM4-207ENST00000588032 NEBP20929 6669 aa4.1□□□□□ -1.75
TPM4-207ENST00000588032 A0A1B0GU33 70 aa4.1□□□□□ -1.75
TPM4-207ENST00000588032 A0A1B0GU69 56 aa4.07□□□□□ -1.76
TPM4-207ENST00000588032 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
TPM4-207ENST00000588032 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
TPM4-207ENST00000588032 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
TPM4-207ENST00000588032 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
TPM4-207ENST00000588032 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
TPM4-207ENST00000588032 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
TPM4-207ENST00000588032 A0A0D9SG42 100 aa4.03□□□□□ -1.76
TPM4-207ENST00000588032 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
TPM4-207ENST00000588032 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
TPM4-207ENST00000588032 TMEM258P61165 79 aa4.02□□□□□ -1.77
TPM4-207ENST00000588032 SMIM26A0A096LP01 95 aa4□□□□□ -1.77
TPM4-207ENST00000588032 PRR15LQ9BU68 103 aa4□□□□□ -1.77
TPM4-207ENST00000588032 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
TPM4-207ENST00000588032 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
TPM4-207ENST00000588032 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
TPM4-207ENST00000588032 LINC01558Q9Y6Z2 57 aa3.96□□□□□ -1.78
TPM4-207ENST00000588032 KMT2DO14686 5537 aa3.96□□□□□ -1.78
TPM4-207ENST00000588032 SPRR2EP22531 72 aa3.94□□□□□ -1.78
TPM4-207ENST00000588032 SPRR2BP35325 72 aa3.94□□□□□ -1.78
TPM4-207ENST00000588032 SPRR2AP35326 72 aa3.94□□□□□ -1.78
TPM4-207ENST00000588032 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
TPM4-207ENST00000588032 A8MU10 97 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms