RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 PRR4Q16378 134 aa3.28□□□□□ -1.88
SDF2-206ENST00000587788 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
SDF2-206ENST00000587788 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
SDF2-206ENST00000587788 KRTAP13-3Q3SY46 172 aa3.27□□□□□ -1.89
SDF2-206ENST00000587788 NOTCH2NLQ7Z3S9 236 aa3.27□□□□□ -1.89
SDF2-206ENST00000587788 PCOTHQ58A44 107 aa3.26□□□□□ -1.89
SDF2-206ENST00000587788 COA5Q86WW8 74 aa3.26□□□□□ -1.89
SDF2-206ENST00000587788 ACYP2P14621 99 aa3.24□□□□□ -1.89
SDF2-206ENST00000587788 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
SDF2-206ENST00000587788 Q5W150 140 aa3.24□□□□□ -1.89
SDF2-206ENST00000587788 LINC00304Q8N9R0 145 aa3.24□□□□□ -1.89
SDF2-206ENST00000587788 TNXBP22105 4242 aa3.24□□□□□ -1.89
SDF2-206ENST00000587788 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
SDF2-206ENST00000587788 KRTAP16-1A8MUX0 517 aa3.23□□□□□ -1.89
SDF2-206ENST00000587788 BRK1Q8WUW1 75 aa3.22□□□□□ -1.89
SDF2-206ENST00000587788 HRES1P13985 223 aa3.21□□□□□ -1.9
SDF2-206ENST00000587788 DMAC1Q96GE9 116 aa3.21□□□□□ -1.9
SDF2-206ENST00000587788 LINC01558Q9Y6Z2 57 aa3.21□□□□□ -1.9
SDF2-206ENST00000587788 HMCN2Q8NDA2 5059 aa3.2□□□□□ -1.9
SDF2-206ENST00000587788 PSPHP1O15172 72 aa3.2□□□□□ -1.9
SDF2-206ENST00000587788 A8MUN3 132 aa3.19□□□□□ -1.9
SDF2-206ENST00000587788 CHKB-CPT1BH3BT56 60 aa3.18□□□□□ -1.9
SDF2-206ENST00000587788 Q5VV11 94 aa3.18□□□□□ -1.9
SDF2-206ENST00000587788 PRR15LQ9BU68 103 aa3.18□□□□□ -1.9
SDF2-206ENST00000587788 C7orf65Q6ZTY9 151 aa3.16□□□□□ -1.9
SDF2-206ENST00000587788 PRAC1Q96KF2 57 aa3.16□□□□□ -1.9
SDF2-206ENST00000587788 A8MUU9 505 aa3.15□□□□□ -1.91
SDF2-206ENST00000587788 C20orf166-AS1Q96NR2 134 aa3.15□□□□□ -1.91
SDF2-206ENST00000587788 A6NED7 52 aa3.14□□□□□ -1.91
SDF2-206ENST00000587788 RETNLBQ9BQ08 111 aa3.14□□□□□ -1.91
SDF2-206ENST00000587788 SPTSSBQ8NFR3 76 aa3.13□□□□□ -1.91
SDF2-206ENST00000587788 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
SDF2-206ENST00000587788 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
SDF2-206ENST00000587788 ATP11AUNQ6ZP68 121 aa3.12□□□□□ -1.91
SDF2-206ENST00000587788 CDC42SE1Q9NRR8 79 aa3.12□□□□□ -1.91
SDF2-206ENST00000587788 LPAP08519 4548 aa3.12□□□□□ -1.91
SDF2-206ENST00000587788 LRP2P98164 4655 aa3.1□□□□□ -1.91
SDF2-206ENST00000587788 A0A1B0GU69 56 aa3.1□□□□□ -1.91
SDF2-206ENST00000587788 C9orf92A6NGG3 77 aa3.08□□□□□ -1.92
SDF2-206ENST00000587788 LCA10Q71F78 164 aa3.08□□□□□ -1.92
SDF2-206ENST00000587788 SEC61GP60059 68 aa3.07□□□□□ -1.92
SDF2-206ENST00000587788 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
SDF2-206ENST00000587788 SPINK7P58062 85 aa3.06□□□□□ -1.92
SDF2-206ENST00000587788 UQCR11O14957 56 aa3.05□□□□□ -1.92
SDF2-206ENST00000587788 MT3P25713 68 aa3.05□□□□□ -1.92
SDF2-206ENST00000587788 TPRXLQ17RH7 258 aa3.05□□□□□ -1.92
SDF2-206ENST00000587788 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
SDF2-206ENST00000587788 SPATA8Q6RVD6 105 aa3.04□□□□□ -1.92
SDF2-206ENST00000587788 COX6B2Q6YFQ2 88 aa3.03□□□□□ -1.92
SDF2-206ENST00000587788 RPL37P61927 97 aaKnown RBP3.02□□□□□ -1.93
SDF2-206ENST00000587788 MIR22HGQ0VDD5 57 aa3.02□□□□□ -1.93
SDF2-206ENST00000587788 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
SDF2-206ENST00000587788 A6NN06 94 aa3.01□□□□□ -1.93
SDF2-206ENST00000587788 A8MU10 97 aa3□□□□□ -1.93
SDF2-206ENST00000587788 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
SDF2-206ENST00000587788 KTN1-AS1Q86SY8 53 aa3□□□□□ -1.93
SDF2-206ENST00000587788 MUC17Q685J3 4493 aa2.96□□□□□ -1.94
SDF2-206ENST00000587788 A0A1B0GU33 70 aa2.95□□□□□ -1.94
SDF2-206ENST00000587788 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
SDF2-206ENST00000587788 MUC2Q02817 5179 aa2.95□□□□□ -1.94
SDF2-206ENST00000587788 H1FX-AS1Q4G0G2 97 aa2.94□□□□□ -1.94
SDF2-206ENST00000587788 KRTAP4-1Q9BYQ7 146 aa2.93□□□□□ -1.94
SDF2-206ENST00000587788 S4R3F8 94 aa2.92□□□□□ -1.94
SDF2-206ENST00000587788 K7ERS5 55 aa2.91□□□□□ -1.94
SDF2-206ENST00000587788 RBM12B-AS1Q9P1G2 102 aa2.9□□□□□ -1.95
SDF2-206ENST00000587788 H0YAA0 97 aa2.89□□□□□ -1.95
SDF2-206ENST00000587788 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
SDF2-206ENST00000587788 CSAG1Q6PB30 78 aa2.86□□□□□ -1.95
SDF2-206ENST00000587788 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
SDF2-206ENST00000587788 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
SDF2-206ENST00000587788 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SDF2-206ENST00000587788 M0QZ58 72 aa2.81□□□□□ -1.96
SDF2-206ENST00000587788 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
SDF2-206ENST00000587788 P0C880 135 aa2.78□□□□□ -1.96
SDF2-206ENST00000587788 ROMO1P60602 79 aa2.77□□□□□ -1.97
SDF2-206ENST00000587788 MT1HP80294 61 aa2.77□□□□□ -1.97
SDF2-206ENST00000587788 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
SDF2-206ENST00000587788 LINC01554Q52M75 96 aa2.76□□□□□ -1.97
SDF2-206ENST00000587788 A0A0D9SG42 100 aa2.75□□□□□ -1.97
SDF2-206ENST00000587788 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
SDF2-206ENST00000587788 FLGP20930 4061 aaPredicted RBP2.74□□□□□ -1.97
SDF2-206ENST00000587788 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
SDF2-206ENST00000587788 R4GN34 69 aa2.7□□□□□ -1.98
SDF2-206ENST00000587788 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
SDF2-206ENST00000587788 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
SDF2-206ENST00000587788 M0R2T5 61 aa2.68□□□□□ -1.98
SDF2-206ENST00000587788 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
SDF2-206ENST00000587788 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
SDF2-206ENST00000587788 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
SDF2-206ENST00000587788 MT2AP02795 61 aa2.6□□□□□ -1.99
SDF2-206ENST00000587788 MT1FP04733 61 aa2.59□□□□□ -1.99
SDF2-206ENST00000587788 CRCT1Q9UGL9 99 aa2.59□□□□□ -1.99
SDF2-206ENST00000587788 KRTAP10-5P60370 271 aa2.58□□□□□ -2
SDF2-206ENST00000587788 LCE1EQ5T753 118 aa2.58□□□□□ -2
SDF2-206ENST00000587788 FSIP2Q5CZC0 6907 aa2.58□□□□□ -2
SDF2-206ENST00000587788 KRTAP10-10P60014 251 aa2.56□□□□□ -2
SDF2-206ENST00000587788 KRTAP10-7P60409 375 aaPredicted RBP2.56□□□□□ -2
SDF2-206ENST00000587788 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
SDF2-206ENST00000587788 PP632Q6XCG6 107 aa2.55□□□□□ -2
SDF2-206ENST00000587788 C10orf95Q9H7T3 257 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms