RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 SYNE2Q8WXH0 6885 aaKnown RBP8.91□□□□□ -0.98
H3F3B-206ENST00000587560 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
H3F3B-206ENST00000587560 CYSTM1Q9H1C7 97 aa8.9□□□□□ -0.98
H3F3B-206ENST00000587560 DMAC1Q96GE9 116 aa8.88□□□□□ -0.99
H3F3B-206ENST00000587560 CCDC179H3BU77 68 aa8.86□□□□□ -0.99
H3F3B-206ENST00000587560 SPANXA2-OT1Q8N9U9 137 aa8.86□□□□□ -0.99
H3F3B-206ENST00000587560 H7BZZ5 65 aa8.84□□□□□ -0.99
H3F3B-206ENST00000587560 MACF1Q9UPN3 7388 aaKnown RBP8.84□□□□□ -0.99
H3F3B-206ENST00000587560 NDUFC1O43677 76 aa8.82□□□□□ -1
H3F3B-206ENST00000587560 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
H3F3B-206ENST00000587560 KRTAP3-3Q9BYR6 98 aa8.81□□□□□ -1
H3F3B-206ENST00000587560 S4R3F8 94 aa8.81□□□□□ -1
H3F3B-206ENST00000587560 LCA10Q71F78 164 aa8.8□□□□□ -1
H3F3B-206ENST00000587560 M0R2T5 61 aa8.79□□□□□ -1
H3F3B-206ENST00000587560 ACYP2P14621 99 aa8.72□□□□□ -1.01
H3F3B-206ENST00000587560 KRTAP9-8Q9BYQ0 159 aa8.72□□□□□ -1.01
H3F3B-206ENST00000587560 CSAG1Q6PB30 78 aa8.67□□□□□ -1.02
H3F3B-206ENST00000587560 MT2AP02795 61 aa8.62□□□□□ -1.03
H3F3B-206ENST00000587560 MT1FP04733 61 aa8.57□□□□□ -1.04
H3F3B-206ENST00000587560 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
H3F3B-206ENST00000587560 PCP4P48539 62 aa8.55□□□□□ -1.04
H3F3B-206ENST00000587560 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
H3F3B-206ENST00000587560 TMEM258P61165 79 aa8.54□□□□□ -1.04
H3F3B-206ENST00000587560 COA5Q86WW8 74 aa8.54□□□□□ -1.04
H3F3B-206ENST00000587560 H0YAA0 97 aa8.51□□□□□ -1.05
H3F3B-206ENST00000587560 KRTAP6-3Q3LI67 103 aa8.5□□□□□ -1.05
H3F3B-206ENST00000587560 CHKB-CPT1BH3BT56 60 aa8.48□□□□□ -1.05
H3F3B-206ENST00000587560 NEBP20929 6669 aa8.48□□□□□ -1.05
H3F3B-206ENST00000587560 KRTAP20-1Q3LI63 56 aa8.47□□□□□ -1.05
H3F3B-206ENST00000587560 SPTSSBQ8NFR3 76 aa8.45□□□□□ -1.06
H3F3B-206ENST00000587560 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
H3F3B-206ENST00000587560 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
H3F3B-206ENST00000587560 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
H3F3B-206ENST00000587560 ADM2Q7Z4H4 148 aa8.35□□□□□ -1.07
H3F3B-206ENST00000587560 P0C880 135 aa8.3□□□□□ -1.08
H3F3B-206ENST00000587560 MUC12Q9UKN1 5478 aa8.28□□□□□ -1.08
H3F3B-206ENST00000587560 SERP1Q9Y6X1 66 aa8.28□□□□□ -1.08
H3F3B-206ENST00000587560 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
H3F3B-206ENST00000587560 CRIPTQ9P021 101 aa8.26□□□□□ -1.09
H3F3B-206ENST00000587560 LCE2BO14633 110 aa8.25□□□□□ -1.09
H3F3B-206ENST00000587560 KRTAP19-8Q3LI54 63 aa8.13□□□□□ -1.11
H3F3B-206ENST00000587560 LINC01558Q9Y6Z2 57 aa8.11□□□□□ -1.11
H3F3B-206ENST00000587560 RPS28P62857 69 aaKnown RBP8.1□□□□□ -1.11
H3F3B-206ENST00000587560 KRTAP19-6Q3LI70 58 aa8.1□□□□□ -1.11
H3F3B-206ENST00000587560 SEC61GP60059 68 aa8.07□□□□□ -1.12
H3F3B-206ENST00000587560 R4GN34 69 aa8.06□□□□□ -1.12
H3F3B-206ENST00000587560 A0A1B0GU69 56 aa8.04□□□□□ -1.12
H3F3B-206ENST00000587560 M0QZ58 72 aa8.04□□□□□ -1.12
H3F3B-206ENST00000587560 MT1BP07438 61 aa8.04□□□□□ -1.12
H3F3B-206ENST00000587560 KRTAP13-4Q3LI77 160 aa8.02□□□□□ -1.13
H3F3B-206ENST00000587560 SMIM26A0A096LP01 95 aa7.99□□□□□ -1.13
H3F3B-206ENST00000587560 KMT2DO14686 5537 aa7.98□□□□□ -1.13
H3F3B-206ENST00000587560 Q1T7F1 81 aa7.98□□□□□ -1.13
H3F3B-206ENST00000587560 Q5VV11 94 aa7.97□□□□□ -1.13
H3F3B-206ENST00000587560 A0A1B0GU33 70 aa7.96□□□□□ -1.14
H3F3B-206ENST00000587560 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
H3F3B-206ENST00000587560 V9GYY9 64 aa7.93□□□□□ -1.14
H3F3B-206ENST00000587560 KRTAP2-3P0C7H8 128 aa7.9□□□□□ -1.14
H3F3B-206ENST00000587560 KRTAP2-4Q9BYR9 128 aa7.9□□□□□ -1.14
H3F3B-206ENST00000587560 A6NN06 94 aa7.85□□□□□ -1.15
H3F3B-206ENST00000587560 SPATA8Q6RVD6 105 aa7.85□□□□□ -1.15
H3F3B-206ENST00000587560 LINC01554Q52M75 96 aa7.84□□□□□ -1.15
H3F3B-206ENST00000587560 MDN1Q9NU22 5596 aa7.81□□□□□ -1.16
H3F3B-206ENST00000587560 GPR98Q8WXG9 6306 aa7.81□□□□□ -1.16
H3F3B-206ENST00000587560 PSPHP1O15172 72 aa7.78□□□□□ -1.16
H3F3B-206ENST00000587560 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
H3F3B-206ENST00000587560 UQCR11O14957 56 aa7.73□□□□□ -1.17
H3F3B-206ENST00000587560 KRTAP10-5P60370 271 aa7.71□□□□□ -1.18
H3F3B-206ENST00000587560 A0A0D9SG42 100 aa7.7□□□□□ -1.18
H3F3B-206ENST00000587560 A8MU10 97 aa7.69□□□□□ -1.18
H3F3B-206ENST00000587560 KRTAP12-1P59990 96 aa7.67□□□□□ -1.18
H3F3B-206ENST00000587560 MT1XP80297 61 aa7.67□□□□□ -1.18
H3F3B-206ENST00000587560 KRTAP5-9P26371 169 aa7.62□□□□□ -1.19
H3F3B-206ENST00000587560 KRTAP12-2P59991 146 aa7.62□□□□□ -1.19
H3F3B-206ENST00000587560 MIR22HGQ0VDD5 57 aa7.61□□□□□ -1.19
H3F3B-206ENST00000587560 KRTAP2-2Q9BYT5 123 aa7.57□□□□□ -1.2
H3F3B-206ENST00000587560 KRTAP2-1Q9BYU5 128 aa7.57□□□□□ -1.2
H3F3B-206ENST00000587560 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
H3F3B-206ENST00000587560 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
H3F3B-206ENST00000587560 A6NED7 52 aa7.52□□□□□ -1.21
H3F3B-206ENST00000587560 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.22
H3F3B-206ENST00000587560 CDC42SE1Q9NRR8 79 aa7.4□□□□□ -1.22
H3F3B-206ENST00000587560 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
H3F3B-206ENST00000587560 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
H3F3B-206ENST00000587560 C10orf95Q9H7T3 257 aa7.3□□□□□ -1.24
H3F3B-206ENST00000587560 K7ERS5 55 aa7.27□□□□□ -1.25
H3F3B-206ENST00000587560 SPRR2EP22531 72 aa7.26□□□□□ -1.25
H3F3B-206ENST00000587560 SPRR2BP35325 72 aa7.26□□□□□ -1.25
H3F3B-206ENST00000587560 SPRR2AP35326 72 aa7.26□□□□□ -1.25
H3F3B-206ENST00000587560 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
H3F3B-206ENST00000587560 KRTAP4-8Q9BYQ9 185 aa7.14□□□□□ -1.27
H3F3B-206ENST00000587560 BRK1Q8WUW1 75 aa7.1□□□□□ -1.27
H3F3B-206ENST00000587560 TNP1P09430 55 aa7.08□□□□□ -1.28
H3F3B-206ENST00000587560 SPRR2FQ96RM1 72 aa7.07□□□□□ -1.28
H3F3B-206ENST00000587560 LCE1AQ5T7P2 110 aa7.04□□□□□ -1.28
H3F3B-206ENST00000587560 SPRR2DP22532 72 aa7.03□□□□□ -1.28
H3F3B-206ENST00000587560 KRTAP8-1Q8IUC2 63 aa7.01□□□□□ -1.29
H3F3B-206ENST00000587560 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
H3F3B-206ENST00000587560 ROMO1P60602 79 aa6.97□□□□□ -1.29
H3F3B-206ENST00000587560 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms