RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
DNMT1-212ENST00000587197 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
DNMT1-212ENST00000587197 SERP2Q8N6R1 65 aa8.15□□□□□ -1.1
DNMT1-212ENST00000587197 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
DNMT1-212ENST00000587197 LCE2BO14633 110 aa8.12□□□□□ -1.11
DNMT1-212ENST00000587197 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
DNMT1-212ENST00000587197 NDUFC1O43677 76 aa8.06□□□□□ -1.12
DNMT1-212ENST00000587197 SNURFQ9Y675 71 aa8.05□□□□□ -1.12
DNMT1-212ENST00000587197 USH2AO75445 5202 aa8.04□□□□□ -1.12
DNMT1-212ENST00000587197 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
DNMT1-212ENST00000587197 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
DNMT1-212ENST00000587197 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.01□□□□□ -1.13
DNMT1-212ENST00000587197 COX7CP15954 63 aa7.99□□□□□ -1.13
DNMT1-212ENST00000587197 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
DNMT1-212ENST00000587197 SSPOA2VEC9 5147 aa7.96□□□□□ -1.13
DNMT1-212ENST00000587197 ACYP2P14621 99 aa7.96□□□□□ -1.14
DNMT1-212ENST00000587197 KRTAP9-7A8MTY7 169 aa7.94□□□□□ -1.14
DNMT1-212ENST00000587197 H0YAA0 97 aa7.94□□□□□ -1.14
DNMT1-212ENST00000587197 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
DNMT1-212ENST00000587197 ANAPC13Q9BS18 74 aa7.87□□□□□ -1.15
DNMT1-212ENST00000587197 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.16
DNMT1-212ENST00000587197 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
DNMT1-212ENST00000587197 SPRR2GQ9BYE4 73 aa7.81□□□□□ -1.16
DNMT1-212ENST00000587197 SPTSSBQ8NFR3 76 aa7.8□□□□□ -1.16
DNMT1-212ENST00000587197 H7BZZ5 65 aa7.79□□□□□ -1.16
DNMT1-212ENST00000587197 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
DNMT1-212ENST00000587197 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
DNMT1-212ENST00000587197 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
DNMT1-212ENST00000587197 KRTAP19-8Q3LI54 63 aa7.7□□□□□ -1.18
DNMT1-212ENST00000587197 CCDC179H3BU77 68 aa7.69□□□□□ -1.18
DNMT1-212ENST00000587197 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
DNMT1-212ENST00000587197 COA5Q86WW8 74 aa7.67□□□□□ -1.18
DNMT1-212ENST00000587197 P0C880 135 aa7.66□□□□□ -1.18
DNMT1-212ENST00000587197 MACF1Q9UPN3 7388 aaKnown RBP7.64□□□□□ -1.19
DNMT1-212ENST00000587197 Q5VV11 94 aa7.64□□□□□ -1.19
DNMT1-212ENST00000587197 MT1BP07438 61 aa7.62□□□□□ -1.19
DNMT1-212ENST00000587197 R4GN34 69 aa7.58□□□□□ -1.2
DNMT1-212ENST00000587197 A6NN06 94 aa7.56□□□□□ -1.2
DNMT1-212ENST00000587197 ATP5EP56381 51 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-212ENST00000587197 SYNE2Q8WXH0 6885 aaKnown RBP7.54□□□□□ -1.2
DNMT1-212ENST00000587197 M0QZ58 72 aa7.52□□□□□ -1.21
DNMT1-212ENST00000587197 KRTAP6-3Q3LI67 103 aa7.52□□□□□ -1.21
DNMT1-212ENST00000587197 TMEM258P61165 79 aa7.46□□□□□ -1.22
DNMT1-212ENST00000587197 KRTAP10-5P60370 271 aa7.43□□□□□ -1.22
DNMT1-212ENST00000587197 SEC61GP60059 68 aa7.42□□□□□ -1.22
DNMT1-212ENST00000587197 SERP1Q9Y6X1 66 aa7.4□□□□□ -1.22
DNMT1-212ENST00000587197 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
DNMT1-212ENST00000587197 LINC01554Q52M75 96 aa7.36□□□□□ -1.23
DNMT1-212ENST00000587197 KRTAP13-4Q3LI77 160 aa7.29□□□□□ -1.24
DNMT1-212ENST00000587197 A0A1B0GU69 56 aa7.27□□□□□ -1.25
DNMT1-212ENST00000587197 A0A1B0GU33 70 aa7.26□□□□□ -1.25
DNMT1-212ENST00000587197 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
DNMT1-212ENST00000587197 MT1XP80297 61 aa7.23□□□□□ -1.25
DNMT1-212ENST00000587197 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
DNMT1-212ENST00000587197 PRR15LQ9BU68 103 aa7.18□□□□□ -1.26
DNMT1-212ENST00000587197 PCP4P48539 62 aa7.15□□□□□ -1.26
DNMT1-212ENST00000587197 SPATA8Q6RVD6 105 aa7.15□□□□□ -1.26
DNMT1-212ENST00000587197 KRTAP5-9P26371 169 aa7.14□□□□□ -1.27
DNMT1-212ENST00000587197 A0A0D9SG42 100 aa7.08□□□□□ -1.28
DNMT1-212ENST00000587197 NEBP20929 6669 aa7.07□□□□□ -1.28
DNMT1-212ENST00000587197 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
DNMT1-212ENST00000587197 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
DNMT1-212ENST00000587197 V9GYY9 64 aa7.02□□□□□ -1.29
DNMT1-212ENST00000587197 CAMK2N1Q7Z7J9 78 aa7.01□□□□□ -1.29
DNMT1-212ENST00000587197 KRTAP12-1P59990 96 aa7□□□□□ -1.29
DNMT1-212ENST00000587197 MUC12Q9UKN1 5478 aa6.98□□□□□ -1.29
DNMT1-212ENST00000587197 KRTAP20-1Q3LI63 56 aa6.98□□□□□ -1.29
DNMT1-212ENST00000587197 Q1T7F1 81 aa6.97□□□□□ -1.29
DNMT1-212ENST00000587197 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
DNMT1-212ENST00000587197 A8MU10 97 aa6.95□□□□□ -1.3
DNMT1-212ENST00000587197 UQCR11O14957 56 aa6.95□□□□□ -1.3
DNMT1-212ENST00000587197 RPS28P62857 69 aaKnown RBP6.95□□□□□ -1.3
DNMT1-212ENST00000587197 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
DNMT1-212ENST00000587197 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
DNMT1-212ENST00000587197 KMT2DO14686 5537 aa6.9□□□□□ -1.31
DNMT1-212ENST00000587197 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
DNMT1-212ENST00000587197 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
DNMT1-212ENST00000587197 SPRR2EP22531 72 aa6.86□□□□□ -1.31
DNMT1-212ENST00000587197 SPRR2BP35325 72 aa6.86□□□□□ -1.31
DNMT1-212ENST00000587197 SPRR2AP35326 72 aa6.86□□□□□ -1.31
DNMT1-212ENST00000587197 PSPHP1O15172 72 aa6.84□□□□□ -1.31
DNMT1-212ENST00000587197 KRTAP2-3P0C7H8 128 aa6.81□□□□□ -1.32
DNMT1-212ENST00000587197 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
DNMT1-212ENST00000587197 KRTAP2-4Q9BYR9 128 aa6.81□□□□□ -1.32
DNMT1-212ENST00000587197 MDN1Q9NU22 5596 aa6.78□□□□□ -1.32
DNMT1-212ENST00000587197 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
DNMT1-212ENST00000587197 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
DNMT1-212ENST00000587197 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
DNMT1-212ENST00000587197 A6NED7 52 aa6.65□□□□□ -1.34
DNMT1-212ENST00000587197 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
DNMT1-212ENST00000587197 SPRR2DP22532 72 aa6.64□□□□□ -1.35
DNMT1-212ENST00000587197 K7ERS5 55 aa6.63□□□□□ -1.35
DNMT1-212ENST00000587197 TNP1P09430 55 aa6.59□□□□□ -1.35
DNMT1-212ENST00000587197 KRTAP2-2Q9BYT5 123 aa6.59□□□□□ -1.35
DNMT1-212ENST00000587197 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.35
DNMT1-212ENST00000587197 KRTAP19-7Q3SYF9 63 aa6.46□□□□□ -1.38
DNMT1-212ENST00000587197 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
DNMT1-212ENST00000587197 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
DNMT1-212ENST00000587197 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
DNMT1-212ENST00000587197 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms