RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 BRK1Q8WUW1 75 aa11.3□□□□□ -0.6
CIRBP-208ENST00000586548 RBM12B-AS1Q9P1G2 102 aa11.24□□□□□ -0.61
CIRBP-208ENST00000586548 A6NED7 52 aa11.23□□□□□ -0.61
CIRBP-208ENST00000586548 H1FX-AS1Q4G0G2 97 aa11.22□□□□□ -0.61
CIRBP-208ENST00000586548 S4R3F8 94 aa11.21□□□□□ -0.62
CIRBP-208ENST00000586548 PRO0628Q9UI54 55 aa11.2□□□□□ -0.62
CIRBP-208ENST00000586548 MUC17Q685J3 4493 aa11.2□□□□□ -0.62
CIRBP-208ENST00000586548 LCA10Q71F78 164 aa11.18□□□□□ -0.62
CIRBP-208ENST00000586548 SEC61GP60059 68 aa11.18□□□□□ -0.62
CIRBP-208ENST00000586548 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
CIRBP-208ENST00000586548 HMCN2Q8NDA2 5059 aa11.15□□□□□ -0.62
CIRBP-208ENST00000586548 KRTAP4-1Q9BYQ7 146 aa11.09□□□□□ -0.63
CIRBP-208ENST00000586548 CDC42SE1Q9NRR8 79 aa11.08□□□□□ -0.64
CIRBP-208ENST00000586548 A8MU10 97 aa11.04□□□□□ -0.64
CIRBP-208ENST00000586548 UQCR11O14957 56 aa11.03□□□□□ -0.64
CIRBP-208ENST00000586548 SPATA8Q6RVD6 105 aa10.95□□□□□ -0.66
CIRBP-208ENST00000586548 MIR22HGQ0VDD5 57 aa10.92□□□□□ -0.66
CIRBP-208ENST00000586548 CSAG1Q6PB30 78 aa10.91□□□□□ -0.66
CIRBP-208ENST00000586548 A0A1B0GU33 70 aa10.89□□□□□ -0.67
CIRBP-208ENST00000586548 KRTAP19-2Q3LHN2 52 aa10.86□□□□□ -0.67
CIRBP-208ENST00000586548 SVIPQ8NHG7 77 aa10.85□□□□□ -0.67
CIRBP-208ENST00000586548 KRTAP10-6P60371 365 aaPredicted RBP10.84□□□□□ -0.67
CIRBP-208ENST00000586548 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
CIRBP-208ENST00000586548 H0YAA0 97 aa10.77□□□□□ -0.69
CIRBP-208ENST00000586548 UBR4Q5T4S7 5183 aa10.73□□□□□ -0.69
CIRBP-208ENST00000586548 ADM2Q7Z4H4 148 aa10.72□□□□□ -0.69
CIRBP-208ENST00000586548 P0C880 135 aa10.7□□□□□ -0.7
CIRBP-208ENST00000586548 PMAIP1Q13794 54 aa10.69□□□□□ -0.7
CIRBP-208ENST00000586548 MUC2Q02817 5179 aa10.68□□□□□ -0.7
CIRBP-208ENST00000586548 FLGP20930 4061 aaPredicted RBP10.61□□□□□ -0.71
CIRBP-208ENST00000586548 A6NN06 94 aa10.61□□□□□ -0.71
CIRBP-208ENST00000586548 KRTAP13-4Q3LI77 160 aa10.58□□□□□ -0.72
CIRBP-208ENST00000586548 RNF213Q63HN8 5207 aa10.57□□□□□ -0.72
CIRBP-208ENST00000586548 LCE2CQ5TA81 110 aa10.49□□□□□ -0.73
CIRBP-208ENST00000586548 M0QZ58 72 aa10.47□□□□□ -0.73
CIRBP-208ENST00000586548 A0A0D9SG42 100 aa10.4□□□□□ -0.74
CIRBP-208ENST00000586548 K7ERS5 55 aa10.38□□□□□ -0.75
CIRBP-208ENST00000586548 KTN1-AS1Q86SY8 53 aa10.34□□□□□ -0.75
CIRBP-208ENST00000586548 R4GN34 69 aa10.33□□□□□ -0.76
CIRBP-208ENST00000586548 LORP23490 312 aaPredicted RBP10.28□□□□□ -0.76
CIRBP-208ENST00000586548 FAT4Q6V0I7 4981 aa10.27□□□□□ -0.77
CIRBP-208ENST00000586548 MT1HP80294 61 aa10.26□□□□□ -0.77
CIRBP-208ENST00000586548 M0R2T5 61 aa10.21□□□□□ -0.78
CIRBP-208ENST00000586548 KRTAP12-1P59990 96 aa10.2□□□□□ -0.78
CIRBP-208ENST00000586548 KRTAP12-2P59991 146 aa10.18□□□□□ -0.78
CIRBP-208ENST00000586548 CRIPTQ9P021 101 aa10.16□□□□□ -0.78
CIRBP-208ENST00000586548 LINC01554Q52M75 96 aa10.15□□□□□ -0.78
CIRBP-208ENST00000586548 SPINT4Q6UDR6 99 aa10.13□□□□□ -0.79
CIRBP-208ENST00000586548 ROMO1P60602 79 aa10□□□□□ -0.81
CIRBP-208ENST00000586548 PRAC1Q96KF2 57 aa9.99□□□□□ -0.81
CIRBP-208ENST00000586548 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
CIRBP-208ENST00000586548 MT2AP02795 61 aa9.93□□□□□ -0.82
CIRBP-208ENST00000586548 KRTAP9-8Q9BYQ0 159 aa9.92□□□□□ -0.82
CIRBP-208ENST00000586548 MT1FP04733 61 aa9.87□□□□□ -0.83
CIRBP-208ENST00000586548 SPRR2GQ9BYE4 73 aa9.87□□□□□ -0.83
CIRBP-208ENST00000586548 KRTAP10-10P60014 251 aa9.85□□□□□ -0.83
CIRBP-208ENST00000586548 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
CIRBP-208ENST00000586548 KRTAP25-1Q3LHN0 102 aa9.7□□□□□ -0.86
CIRBP-208ENST00000586548 CAMK2N1Q7Z7J9 78 aa9.7□□□□□ -0.86
CIRBP-208ENST00000586548 C10orf95Q9H7T3 257 aa9.63□□□□□ -0.87
CIRBP-208ENST00000586548 PLAC4Q8WY50 150 aa9.6□□□□□ -0.87
CIRBP-208ENST00000586548 KRTAP19-8Q3LI54 63 aa9.57□□□□□ -0.88
CIRBP-208ENST00000586548 KRTAP9-3Q9BYQ3 159 aa9.55□□□□□ -0.88
CIRBP-208ENST00000586548 MT1BP07438 61 aa9.42□□□□□ -0.9
CIRBP-208ENST00000586548 TNP1P09430 55 aa9.29□□□□□ -0.92
CIRBP-208ENST00000586548 LCE2BO14633 110 aa9.23□□□□□ -0.93
CIRBP-208ENST00000586548 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-208ENST00000586548 MT1XP80297 61 aa9.17□□□□□ -0.94
CIRBP-208ENST00000586548 PP632Q6XCG6 107 aa9.17□□□□□ -0.94
CIRBP-208ENST00000586548 KRTAP9-2Q9BYQ4 174 aa9.17□□□□□ -0.94
CIRBP-208ENST00000586548 KRTAP10-5P60370 271 aa9.16□□□□□ -0.94
CIRBP-208ENST00000586548 KRTAP23-1A1A580 65 aa9.11□□□□□ -0.95
CIRBP-208ENST00000586548 PRO2289Q9P1D8 64 aa9.04□□□□□ -0.96
CIRBP-208ENST00000586548 USH2AO75445 5202 aa8.97□□□□□ -0.97
CIRBP-208ENST00000586548 FSIP2Q5CZC0 6907 aa8.91□□□□□ -0.98
CIRBP-208ENST00000586548 LCE3AQ5TA76 89 aa8.85□□□□□ -0.99
CIRBP-208ENST00000586548 KRTAP10-7P60409 375 aaPredicted RBP8.81□□□□□ -1
CIRBP-208ENST00000586548 KRTAP10-12P60413 245 aa8.8□□□□□ -1
CIRBP-208ENST00000586548 CRCT1Q9UGL9 99 aa8.77□□□□□ -1.01
CIRBP-208ENST00000586548 KRTAP8-1Q8IUC2 63 aa8.68□□□□□ -1.02
CIRBP-208ENST00000586548 SSPOA2VEC9 5147 aa8.68□□□□□ -1.02
CIRBP-208ENST00000586548 KRTAP9-6A0A140TA67 174 aa8.66□□□□□ -1.02
CIRBP-208ENST00000586548 KRTAP15-1Q3LI76 137 aa8.66□□□□□ -1.02
CIRBP-208ENST00000586548 KRTAP19-6Q3LI70 58 aa8.63□□□□□ -1.03
CIRBP-208ENST00000586548 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
CIRBP-208ENST00000586548 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
CIRBP-208ENST00000586548 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
CIRBP-208ENST00000586548 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
CIRBP-208ENST00000586548 KRTAP19-5Q3LI72 72 aa8.34□□□□□ -1.07
CIRBP-208ENST00000586548 KMT2DO14686 5537 aa8.31□□□□□ -1.08
CIRBP-208ENST00000586548 SPRR5A0A1B0GTR4 108 aa8.25□□□□□ -1.09
CIRBP-208ENST00000586548 KRTAP19-7Q3SYF9 63 aa8.17□□□□□ -1.1
CIRBP-208ENST00000586548 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.12□□□□□ -1.11
CIRBP-208ENST00000586548 MACF1Q9UPN3 7388 aaKnown RBP8.1□□□□□ -1.11
CIRBP-208ENST00000586548 NDUFAF8A1L188 74 aa8.09□□□□□ -1.11
CIRBP-208ENST00000586548 LUZP6Q538Z0 58 aa8.09□□□□□ -1.11
CIRBP-208ENST00000586548 MT1EP04732 61 aa8.02□□□□□ -1.13
CIRBP-208ENST00000586548 LCE3CQ5T5A8 94 aa7.95□□□□□ -1.14
CIRBP-208ENST00000586548 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
CIRBP-208ENST00000586548 SYNE2Q8WXH0 6885 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms