RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 LINC01558Q9Y6Z2 57 aa10.29□□□□□ -0.76
ATG4D-204ENST00000586417 RBM12B-AS1Q9P1G2 102 aa10.24□□□□□ -0.77
ATG4D-204ENST00000586417 PSPHP1O15172 72 aa10.23□□□□□ -0.77
ATG4D-204ENST00000586417 H1FX-AS1Q4G0G2 97 aa10.2□□□□□ -0.78
ATG4D-204ENST00000586417 PRR15LQ9BU68 103 aa10.2□□□□□ -0.78
ATG4D-204ENST00000586417 KRTAP19-2Q3LHN2 52 aa10.19□□□□□ -0.78
ATG4D-204ENST00000586417 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
ATG4D-204ENST00000586417 Q5VV11 94 aa10.16□□□□□ -0.78
ATG4D-204ENST00000586417 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
ATG4D-204ENST00000586417 LCA10Q71F78 164 aa10.16□□□□□ -0.78
ATG4D-204ENST00000586417 S4R3F8 94 aa10.14□□□□□ -0.79
ATG4D-204ENST00000586417 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
ATG4D-204ENST00000586417 FAT4Q6V0I7 4981 aa10.09□□□□□ -0.79
ATG4D-204ENST00000586417 A0A1B0GU69 56 aa10.06□□□□□ -0.8
ATG4D-204ENST00000586417 FLGP20930 4061 aaPredicted RBP10.01□□□□□ -0.81
ATG4D-204ENST00000586417 SEC61GP60059 68 aa9.93□□□□□ -0.82
ATG4D-204ENST00000586417 MT1HP80294 61 aa9.9□□□□□ -0.82
ATG4D-204ENST00000586417 A6NED7 52 aa9.89□□□□□ -0.83
ATG4D-204ENST00000586417 CSAG1Q6PB30 78 aa9.88□□□□□ -0.83
ATG4D-204ENST00000586417 BRK1Q8WUW1 75 aa9.87□□□□□ -0.83
ATG4D-204ENST00000586417 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
ATG4D-204ENST00000586417 KRTAP10-6P60371 365 aaPredicted RBP9.82□□□□□ -0.84
ATG4D-204ENST00000586417 LCE2AQ5TA79 106 aaPredicted RBP9.81□□□□□ -0.84
ATG4D-204ENST00000586417 A8MU10 97 aa9.79□□□□□ -0.84
ATG4D-204ENST00000586417 UQCR11O14957 56 aa9.78□□□□□ -0.84
ATG4D-204ENST00000586417 M0R2T5 61 aa9.75□□□□□ -0.85
ATG4D-204ENST00000586417 CDC42SE1Q9NRR8 79 aa9.75□□□□□ -0.85
ATG4D-204ENST00000586417 A0A1B0GU33 70 aa9.74□□□□□ -0.85
ATG4D-204ENST00000586417 H0YAA0 97 aa9.72□□□□□ -0.85
ATG4D-204ENST00000586417 P0C880 135 aa9.72□□□□□ -0.85
ATG4D-204ENST00000586417 ADM2Q7Z4H4 148 aa9.72□□□□□ -0.85
ATG4D-204ENST00000586417 SPATA8Q6RVD6 105 aa9.7□□□□□ -0.86
ATG4D-204ENST00000586417 PRO0628Q9UI54 55 aa9.7□□□□□ -0.86
ATG4D-204ENST00000586417 MIR22HGQ0VDD5 57 aa9.68□□□□□ -0.86
ATG4D-204ENST00000586417 KRTAP13-4Q3LI77 160 aa9.58□□□□□ -0.88
ATG4D-204ENST00000586417 LORP23490 312 aaPredicted RBP9.55□□□□□ -0.88
ATG4D-204ENST00000586417 KRTAP9-8Q9BYQ0 159 aa9.49□□□□□ -0.89
ATG4D-204ENST00000586417 M0QZ58 72 aa9.42□□□□□ -0.9
ATG4D-204ENST00000586417 MT2AP02795 61 aa9.42□□□□□ -0.9
ATG4D-204ENST00000586417 MT1FP04733 61 aa9.36□□□□□ -0.91
ATG4D-204ENST00000586417 A0A0D9SG42 100 aa9.35□□□□□ -0.91
ATG4D-204ENST00000586417 R4GN34 69 aa9.35□□□□□ -0.91
ATG4D-204ENST00000586417 PMAIP1Q13794 54 aa9.32□□□□□ -0.92
ATG4D-204ENST00000586417 A6NN06 94 aa9.3□□□□□ -0.92
ATG4D-204ENST00000586417 KRTAP10-10P60014 251 aa9.3□□□□□ -0.92
ATG4D-204ENST00000586417 SVIPQ8NHG7 77 aa9.25□□□□□ -0.93
ATG4D-204ENST00000586417 CRIPTQ9P021 101 aa9.22□□□□□ -0.93
ATG4D-204ENST00000586417 KRTAP12-1P59990 96 aa9.19□□□□□ -0.94
ATG4D-204ENST00000586417 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
ATG4D-204ENST00000586417 KRTAP12-2P59991 146 aa9.18□□□□□ -0.94
ATG4D-204ENST00000586417 K7ERS5 55 aa9.17□□□□□ -0.94
ATG4D-204ENST00000586417 KRTAP9-3Q9BYQ3 159 aa9.16□□□□□ -0.94
ATG4D-204ENST00000586417 SPINT4Q6UDR6 99 aa9.1□□□□□ -0.95
ATG4D-204ENST00000586417 SPRR2GQ9BYE4 73 aa9.07□□□□□ -0.96
ATG4D-204ENST00000586417 KRTAP19-1Q8IUB9 90 aa9.06□□□□□ -0.96
ATG4D-204ENST00000586417 LCE2DQ5TA82 110 aaPredicted RBP9.02□□□□□ -0.97
ATG4D-204ENST00000586417 LCE2BO14633 110 aa8.99□□□□□ -0.97
ATG4D-204ENST00000586417 KTN1-AS1Q86SY8 53 aa8.97□□□□□ -0.97
ATG4D-204ENST00000586417 KRTAP9-2Q9BYQ4 174 aa8.94□□□□□ -0.98
ATG4D-204ENST00000586417 USH2AO75445 5202 aa8.92□□□□□ -0.98
ATG4D-204ENST00000586417 ROMO1P60602 79 aa8.86□□□□□ -0.99
ATG4D-204ENST00000586417 FSIP2Q5CZC0 6907 aa8.85□□□□□ -0.99
ATG4D-204ENST00000586417 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
ATG4D-204ENST00000586417 PRAC1Q96KF2 57 aa8.77□□□□□ -1.01
ATG4D-204ENST00000586417 MT1BP07438 61 aa8.76□□□□□ -1.01
ATG4D-204ENST00000586417 CAMK2N1Q7Z7J9 78 aa8.75□□□□□ -1.01
ATG4D-204ENST00000586417 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
ATG4D-204ENST00000586417 C10orf95Q9H7T3 257 aa8.7□□□□□ -1.02
ATG4D-204ENST00000586417 SSPOA2VEC9 5147 aa8.68□□□□□ -1.02
ATG4D-204ENST00000586417 CRCT1Q9UGL9 99 aa8.54□□□□□ -1.04
ATG4D-204ENST00000586417 KRTAP25-1Q3LHN0 102 aa8.53□□□□□ -1.04
ATG4D-204ENST00000586417 KRTAP19-6Q3LI70 58 aa8.49□□□□□ -1.05
ATG4D-204ENST00000586417 MT1XP80297 61 aa8.45□□□□□ -1.06
ATG4D-204ENST00000586417 KRTAP10-5P60370 271 aa8.43□□□□□ -1.06
ATG4D-204ENST00000586417 FCGBPQ9Y6R7 5405 aaPredicted RBP8.41□□□□□ -1.06
ATG4D-204ENST00000586417 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
ATG4D-204ENST00000586417 PRO2289Q9P1D8 64 aa8.35□□□□□ -1.07
ATG4D-204ENST00000586417 TNP1P09430 55 aa8.35□□□□□ -1.07
ATG4D-204ENST00000586417 PP632Q6XCG6 107 aa8.15□□□□□ -1.1
ATG4D-204ENST00000586417 KRTAP23-1A1A580 65 aa8.14□□□□□ -1.11
ATG4D-204ENST00000586417 KRTAP10-7P60409 375 aaPredicted RBP8.12□□□□□ -1.11
ATG4D-204ENST00000586417 LCE3AQ5TA76 89 aa8.04□□□□□ -1.12
ATG4D-204ENST00000586417 KRTAP10-12P60413 245 aa8.01□□□□□ -1.13
ATG4D-204ENST00000586417 MACF1Q9UPN3 7388 aaKnown RBP7.98□□□□□ -1.13
ATG4D-204ENST00000586417 KMT2DO14686 5537 aa7.97□□□□□ -1.13
ATG4D-204ENST00000586417 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.93□□□□□ -1.14
ATG4D-204ENST00000586417 KRTAP8-1Q8IUC2 63 aa7.87□□□□□ -1.15
ATG4D-204ENST00000586417 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
ATG4D-204ENST00000586417 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
ATG4D-204ENST00000586417 SYNE2Q8WXH0 6885 aaKnown RBP7.86□□□□□ -1.15
ATG4D-204ENST00000586417 KRTAP12-3P60328 96 aa7.69□□□□□ -1.18
ATG4D-204ENST00000586417 KRTAP19-5Q3LI72 72 aa7.64□□□□□ -1.19
ATG4D-204ENST00000586417 KRTAP9-7A8MTY7 169 aa7.62□□□□□ -1.19
ATG4D-204ENST00000586417 KRTAP6-3Q3LI67 103 aa7.59□□□□□ -1.19
ATG4D-204ENST00000586417 KRTAP15-1Q3LI76 137 aa7.58□□□□□ -1.2
ATG4D-204ENST00000586417 KRTAP5-9P26371 169 aa7.55□□□□□ -1.2
ATG4D-204ENST00000586417 KRTAP19-7Q3SYF9 63 aa7.54□□□□□ -1.2
ATG4D-204ENST00000586417 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
ATG4D-204ENST00000586417 MUC12Q9UKN1 5478 aa7.49□□□□□ -1.21
ATG4D-204ENST00000586417 MDN1Q9NU22 5596 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms