RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 MT-ATP8P03928 68 aa6.56□□□□□ -1.36
DNMT1-204ENST00000585843 H3BPC8 53 aa6.54□□□□□ -1.36
DNMT1-204ENST00000585843 KLKP1Q107X0 134 aa6.54□□□□□ -1.36
DNMT1-204ENST00000585843 SSPOA2VEC9 5147 aa6.52□□□□□ -1.37
DNMT1-204ENST00000585843 A8MUN3 132 aa6.5□□□□□ -1.37
DNMT1-204ENST00000585843 FAM236AA0A1B0GUQ0 79 aa6.48□□□□□ -1.37
DNMT1-204ENST00000585843 FAM236BA0A1B0GV22 79 aa6.48□□□□□ -1.37
DNMT1-204ENST00000585843 SMIM20Q8N5G0 67 aa6.47□□□□□ -1.37
DNMT1-204ENST00000585843 TRAV7A0A075B6U4 112 aa6.45□□□□□ -1.38
DNMT1-204ENST00000585843 NDUFC1O43677 76 aa6.45□□□□□ -1.38
DNMT1-204ENST00000585843 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
DNMT1-204ENST00000585843 DMAC1Q96GE9 116 aa6.36□□□□□ -1.39
DNMT1-204ENST00000585843 FCGBPQ9Y6R7 5405 aaPredicted RBP6.34□□□□□ -1.4
DNMT1-204ENST00000585843 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
DNMT1-204ENST00000585843 H0YAA0 97 aa6.32□□□□□ -1.4
DNMT1-204ENST00000585843 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
DNMT1-204ENST00000585843 CRIPTQ9P021 101 aa6.3□□□□□ -1.4
DNMT1-204ENST00000585843 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
DNMT1-204ENST00000585843 SERP2Q8N6R1 65 aa6.29□□□□□ -1.4
DNMT1-204ENST00000585843 SNURFQ9Y675 71 aa6.28□□□□□ -1.4
DNMT1-204ENST00000585843 ACYP2P14621 99 aa6.27□□□□□ -1.41
DNMT1-204ENST00000585843 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
DNMT1-204ENST00000585843 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
DNMT1-204ENST00000585843 Q5VV11 94 aa6.24□□□□□ -1.41
DNMT1-204ENST00000585843 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
DNMT1-204ENST00000585843 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
DNMT1-204ENST00000585843 MT1BP07438 61 aa6.2□□□□□ -1.42
DNMT1-204ENST00000585843 SPANXA2-OT1Q8N9U9 137 aa6.19□□□□□ -1.42
DNMT1-204ENST00000585843 SPTSSBQ8NFR3 76 aa6.18□□□□□ -1.42
DNMT1-204ENST00000585843 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
DNMT1-204ENST00000585843 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
DNMT1-204ENST00000585843 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
DNMT1-204ENST00000585843 P0C880 135 aa6.13□□□□□ -1.43
DNMT1-204ENST00000585843 COX7CP15954 63 aa6.13□□□□□ -1.43
DNMT1-204ENST00000585843 H3BS24 57 aa6.1□□□□□ -1.43
DNMT1-204ENST00000585843 R4GN34 69 aa6.1□□□□□ -1.43
DNMT1-204ENST00000585843 A6NN06 94 aa6.09□□□□□ -1.43
DNMT1-204ENST00000585843 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
DNMT1-204ENST00000585843 M0QZ58 72 aa6.05□□□□□ -1.44
DNMT1-204ENST00000585843 SYNE2Q8WXH0 6885 aaKnown RBP6.04□□□□□ -1.44
DNMT1-204ENST00000585843 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
DNMT1-204ENST00000585843 ANAPC13Q9BS18 74 aa6.03□□□□□ -1.44
DNMT1-204ENST00000585843 H7BZZ5 65 aa6□□□□□ -1.45
DNMT1-204ENST00000585843 LCE3BQ5TA77 95 aa6□□□□□ -1.45
DNMT1-204ENST00000585843 COA5Q86WW8 74 aa6□□□□□ -1.45
DNMT1-204ENST00000585843 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
DNMT1-204ENST00000585843 CYSTM1Q9H1C7 97 aa5.98□□□□□ -1.45
DNMT1-204ENST00000585843 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
DNMT1-204ENST00000585843 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
DNMT1-204ENST00000585843 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
DNMT1-204ENST00000585843 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
DNMT1-204ENST00000585843 CCDC179H3BU77 68 aa5.88□□□□□ -1.47
DNMT1-204ENST00000585843 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
DNMT1-204ENST00000585843 SEC61GP60059 68 aa5.86□□□□□ -1.47
DNMT1-204ENST00000585843 MT1XP80297 61 aa5.86□□□□□ -1.47
DNMT1-204ENST00000585843 SERP1Q9Y6X1 66 aa5.84□□□□□ -1.47
DNMT1-204ENST00000585843 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
DNMT1-204ENST00000585843 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
DNMT1-204ENST00000585843 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
DNMT1-204ENST00000585843 A0A1B0GU33 70 aa5.72□□□□□ -1.49
DNMT1-204ENST00000585843 A0A1B0GU69 56 aa5.7□□□□□ -1.5
DNMT1-204ENST00000585843 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
DNMT1-204ENST00000585843 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
DNMT1-204ENST00000585843 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
DNMT1-204ENST00000585843 TMEM258P61165 79 aa5.68□□□□□ -1.5
DNMT1-204ENST00000585843 SPATA8Q6RVD6 105 aa5.67□□□□□ -1.5
DNMT1-204ENST00000585843 KMT2DO14686 5537 aa5.67□□□□□ -1.5
DNMT1-204ENST00000585843 NEBP20929 6669 aa5.66□□□□□ -1.5
DNMT1-204ENST00000585843 A0A0D9SG42 100 aa5.66□□□□□ -1.5
DNMT1-204ENST00000585843 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
DNMT1-204ENST00000585843 KRTAP5-9P26371 169 aa5.65□□□□□ -1.5
DNMT1-204ENST00000585843 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.5
DNMT1-204ENST00000585843 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
DNMT1-204ENST00000585843 PRR15LQ9BU68 103 aa5.6□□□□□ -1.51
DNMT1-204ENST00000585843 MDN1Q9NU22 5596 aa5.59□□□□□ -1.51
DNMT1-204ENST00000585843 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
DNMT1-204ENST00000585843 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.51
DNMT1-204ENST00000585843 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
DNMT1-204ENST00000585843 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
DNMT1-204ENST00000585843 SMIM26A0A096LP01 95 aa5.57□□□□□ -1.52
DNMT1-204ENST00000585843 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
DNMT1-204ENST00000585843 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
DNMT1-204ENST00000585843 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
DNMT1-204ENST00000585843 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
DNMT1-204ENST00000585843 A8MU10 97 aa5.5□□□□□ -1.53
DNMT1-204ENST00000585843 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
DNMT1-204ENST00000585843 SPRR2EP22531 72 aa5.43□□□□□ -1.54
DNMT1-204ENST00000585843 SPRR2BP35325 72 aa5.43□□□□□ -1.54
DNMT1-204ENST00000585843 SPRR2AP35326 72 aa5.43□□□□□ -1.54
DNMT1-204ENST00000585843 UQCR11O14957 56 aa5.41□□□□□ -1.54
DNMT1-204ENST00000585843 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
DNMT1-204ENST00000585843 V9GYY9 64 aa5.36□□□□□ -1.55
DNMT1-204ENST00000585843 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
DNMT1-204ENST00000585843 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
DNMT1-204ENST00000585843 Q1T7F1 81 aa5.32□□□□□ -1.56
DNMT1-204ENST00000585843 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
DNMT1-204ENST00000585843 PCP4P48539 62 aa5.3□□□□□ -1.56
DNMT1-204ENST00000585843 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
DNMT1-204ENST00000585843 PSPHP1O15172 72 aa5.29□□□□□ -1.56
DNMT1-204ENST00000585843 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms