RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 SMIM20Q8N5G0 67 aa8.93□□□□□ -0.98
ATG4D-203ENST00000585752 KRTAP9-7A8MTY7 169 aa8.9□□□□□ -0.98
ATG4D-203ENST00000585752 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.98
ATG4D-203ENST00000585752 TRAV7A0A075B6U4 112 aa8.85□□□□□ -0.99
ATG4D-203ENST00000585752 KLKP1Q107X0 134 aa8.84□□□□□ -0.99
ATG4D-203ENST00000585752 FCGBPQ9Y6R7 5405 aaPredicted RBP8.83□□□□□ -1
ATG4D-203ENST00000585752 A8MUN3 132 aa8.81□□□□□ -1
ATG4D-203ENST00000585752 CSAG1Q6PB30 78 aa8.81□□□□□ -1
ATG4D-203ENST00000585752 LCA10Q71F78 164 aa8.81□□□□□ -1
ATG4D-203ENST00000585752 KRTAP19-6Q3LI70 58 aa8.72□□□□□ -1.01
ATG4D-203ENST00000585752 NDUFC1O43677 76 aa8.71□□□□□ -1.02
ATG4D-203ENST00000585752 SERP2Q8N6R1 65 aa8.68□□□□□ -1.02
ATG4D-203ENST00000585752 MACF1Q9UPN3 7388 aaKnown RBP8.65□□□□□ -1.02
ATG4D-203ENST00000585752 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
ATG4D-203ENST00000585752 SNURFQ9Y675 71 aa8.64□□□□□ -1.03
ATG4D-203ENST00000585752 DMAC1Q96GE9 116 aa8.63□□□□□ -1.03
ATG4D-203ENST00000585752 C20orf197Q8N268 126 aa8.61□□□□□ -1.03
ATG4D-203ENST00000585752 SYNE2Q8WXH0 6885 aaKnown RBP8.6□□□□□ -1.03
ATG4D-203ENST00000585752 ACYP2P14621 99 aa8.55□□□□□ -1.04
ATG4D-203ENST00000585752 COX7CP15954 63 aa8.5□□□□□ -1.05
ATG4D-203ENST00000585752 Q5VV11 94 aa8.47□□□□□ -1.05
ATG4D-203ENST00000585752 H0YAA0 97 aa8.46□□□□□ -1.06
ATG4D-203ENST00000585752 CHKB-CPT1BH3BT56 60 aa8.46□□□□□ -1.06
ATG4D-203ENST00000585752 SPANXA2-OT1Q8N9U9 137 aa8.46□□□□□ -1.06
ATG4D-203ENST00000585752 SPTSSBQ8NFR3 76 aa8.45□□□□□ -1.06
ATG4D-203ENST00000585752 ANAPC13Q9BS18 74 aa8.43□□□□□ -1.06
ATG4D-203ENST00000585752 A6NN06 94 aa8.42□□□□□ -1.06
ATG4D-203ENST00000585752 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
ATG4D-203ENST00000585752 CRIPTQ9P021 101 aa8.4□□□□□ -1.06
ATG4D-203ENST00000585752 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
ATG4D-203ENST00000585752 KRTAP6-3Q3LI67 103 aa8.37□□□□□ -1.07
ATG4D-203ENST00000585752 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
ATG4D-203ENST00000585752 MT1BP07438 61 aa8.32□□□□□ -1.08
ATG4D-203ENST00000585752 H7BZZ5 65 aa8.25□□□□□ -1.09
ATG4D-203ENST00000585752 COA5Q86WW8 74 aa8.23□□□□□ -1.09
ATG4D-203ENST00000585752 R4GN34 69 aa8.23□□□□□ -1.09
ATG4D-203ENST00000585752 P0C880 135 aa8.21□□□□□ -1.1
ATG4D-203ENST00000585752 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.1
ATG4D-203ENST00000585752 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
ATG4D-203ENST00000585752 CCDC179H3BU77 68 aa8.18□□□□□ -1.1
ATG4D-203ENST00000585752 M0QZ58 72 aa8.16□□□□□ -1.1
ATG4D-203ENST00000585752 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
ATG4D-203ENST00000585752 SEC61GP60059 68 aa8.07□□□□□ -1.12
ATG4D-203ENST00000585752 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
ATG4D-203ENST00000585752 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
ATG4D-203ENST00000585752 NEBP20929 6669 aa8.04□□□□□ -1.12
ATG4D-203ENST00000585752 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
ATG4D-203ENST00000585752 SERP1Q9Y6X1 66 aa8.02□□□□□ -1.13
ATG4D-203ENST00000585752 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
ATG4D-203ENST00000585752 MUC12Q9UKN1 5478 aa7.96□□□□□ -1.14
ATG4D-203ENST00000585752 TMEM258P61165 79 aa7.95□□□□□ -1.14
ATG4D-203ENST00000585752 KRTAP5-9P26371 169 aa7.91□□□□□ -1.14
ATG4D-203ENST00000585752 A0A1B0GU69 56 aa7.85□□□□□ -1.15
ATG4D-203ENST00000585752 KRTAP20-1Q3LI63 56 aa7.83□□□□□ -1.16
ATG4D-203ENST00000585752 A0A1B0GU33 70 aa7.81□□□□□ -1.16
ATG4D-203ENST00000585752 MT1XP80297 61 aa7.8□□□□□ -1.16
ATG4D-203ENST00000585752 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
ATG4D-203ENST00000585752 PRR15LQ9BU68 103 aa7.77□□□□□ -1.17
ATG4D-203ENST00000585752 SPRR2FQ96RM1 72 aa7.76□□□□□ -1.17
ATG4D-203ENST00000585752 KMT2DO14686 5537 aa7.75□□□□□ -1.17
ATG4D-203ENST00000585752 MDN1Q9NU22 5596 aa7.74□□□□□ -1.17
ATG4D-203ENST00000585752 KRTAP8-1Q8IUC2 63 aa7.72□□□□□ -1.17
ATG4D-203ENST00000585752 A0A0D9SG42 100 aa7.7□□□□□ -1.18
ATG4D-203ENST00000585752 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
ATG4D-203ENST00000585752 SPRR2EP22531 72 aa7.67□□□□□ -1.18
ATG4D-203ENST00000585752 SPRR2BP35325 72 aa7.67□□□□□ -1.18
ATG4D-203ENST00000585752 SPRR2AP35326 72 aa7.67□□□□□ -1.18
ATG4D-203ENST00000585752 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
ATG4D-203ENST00000585752 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
ATG4D-203ENST00000585752 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
ATG4D-203ENST00000585752 SMIM26A0A096LP01 95 aa7.62□□□□□ -1.19
ATG4D-203ENST00000585752 KRTAP2-3P0C7H8 128 aa7.61□□□□□ -1.19
ATG4D-203ENST00000585752 KRTAP2-4Q9BYR9 128 aa7.61□□□□□ -1.19
ATG4D-203ENST00000585752 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
ATG4D-203ENST00000585752 PCP4P48539 62 aa7.57□□□□□ -1.2
ATG4D-203ENST00000585752 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
ATG4D-203ENST00000585752 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
ATG4D-203ENST00000585752 V9GYY9 64 aa7.5□□□□□ -1.21
ATG4D-203ENST00000585752 A8MU10 97 aa7.47□□□□□ -1.21
ATG4D-203ENST00000585752 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
ATG4D-203ENST00000585752 UQCR11O14957 56 aa7.46□□□□□ -1.22
ATG4D-203ENST00000585752 KRTAP10-7P60409 375 aaPredicted RBP7.46□□□□□ -1.22
ATG4D-203ENST00000585752 LCE1AQ5T7P2 110 aa7.45□□□□□ -1.22
ATG4D-203ENST00000585752 SPRR2DP22532 72 aa7.42□□□□□ -1.22
ATG4D-203ENST00000585752 KRTAP10-12P60413 245 aa7.42□□□□□ -1.22
ATG4D-203ENST00000585752 Q1T7F1 81 aa7.38□□□□□ -1.23
ATG4D-203ENST00000585752 PSPHP1O15172 72 aa7.36□□□□□ -1.23
ATG4D-203ENST00000585752 KRTAP2-2Q9BYT5 123 aa7.36□□□□□ -1.23
ATG4D-203ENST00000585752 KRTAP2-1Q9BYU5 128 aa7.36□□□□□ -1.23
ATG4D-203ENST00000585752 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
ATG4D-203ENST00000585752 RPS28P62857 69 aaKnown RBP7.29□□□□□ -1.24
ATG4D-203ENST00000585752 K7ERS5 55 aa7.22□□□□□ -1.25
ATG4D-203ENST00000585752 LCE3BQ5TA77 95 aa7.21□□□□□ -1.26
ATG4D-203ENST00000585752 A6NED7 52 aa7.18□□□□□ -1.26
ATG4D-203ENST00000585752 TNP1P09430 55 aa7.11□□□□□ -1.27
ATG4D-203ENST00000585752 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.27
ATG4D-203ENST00000585752 KRTAP19-7Q3SYF9 63 aa6.95□□□□□ -1.3
ATG4D-203ENST00000585752 MT1EP04732 61 aa6.93□□□□□ -1.3
ATG4D-203ENST00000585752 KRTAP19-3Q7Z4W3 81 aa6.92□□□□□ -1.3
ATG4D-203ENST00000585752 LCE5AQ5TCM9 118 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms