RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 LINC00208Q96KT6 92 aa11.47□□□□□ -0.57
TTC39C-209ENST00000584250 SMIM20Q8N5G0 67 aa11.42□□□□□ -0.58
TTC39C-209ENST00000584250 KLKP1Q107X0 134 aa11.41□□□□□ -0.58
TTC39C-209ENST00000584250 TRAV7A0A075B6U4 112 aa11.38□□□□□ -0.59
TTC39C-209ENST00000584250 H3BPC8 53 aa11.38□□□□□ -0.59
TTC39C-209ENST00000584250 FCGBPQ9Y6R7 5405 aaPredicted RBP11.37□□□□□ -0.59
TTC39C-209ENST00000584250 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.34□□□□□ -0.59
TTC39C-209ENST00000584250 KRTAP19-6Q3LI70 58 aa11.31□□□□□ -0.6
TTC39C-209ENST00000584250 KRTAP9-7A8MTY7 169 aa11.23□□□□□ -0.61
TTC39C-209ENST00000584250 SERP2Q8N6R1 65 aa11.21□□□□□ -0.61
TTC39C-209ENST00000584250 KRTAP3-2Q9BYR7 98 aa11.2□□□□□ -0.62
TTC39C-209ENST00000584250 A8MUN3 132 aa11.18□□□□□ -0.62
TTC39C-209ENST00000584250 NDUFC1O43677 76 aa11.17□□□□□ -0.62
TTC39C-209ENST00000584250 SPRR2GQ9BYE4 73 aa11.17□□□□□ -0.62
TTC39C-209ENST00000584250 MT1BP07438 61 aa11.14□□□□□ -0.63
TTC39C-209ENST00000584250 SNURFQ9Y675 71 aa11.12□□□□□ -0.63
TTC39C-209ENST00000584250 KRTAP19-8Q3LI54 63 aa11.09□□□□□ -0.63
TTC39C-209ENST00000584250 C20orf197Q8N268 126 aa11.09□□□□□ -0.63
TTC39C-209ENST00000584250 COX7CP15954 63 aa11.03□□□□□ -0.64
TTC39C-209ENST00000584250 Q5VV11 94 aa11.02□□□□□ -0.65
TTC39C-209ENST00000584250 DMAC1Q96GE9 116 aa11.02□□□□□ -0.65
TTC39C-209ENST00000584250 H0YAA0 97 aa11.01□□□□□ -0.65
TTC39C-209ENST00000584250 ADM2Q7Z4H4 148 aa10.97□□□□□ -0.65
TTC39C-209ENST00000584250 ANAPC13Q9BS18 74 aa10.95□□□□□ -0.66
TTC39C-209ENST00000584250 CRIPTQ9P021 101 aa10.95□□□□□ -0.66
TTC39C-209ENST00000584250 MACF1Q9UPN3 7388 aaKnown RBP10.92□□□□□ -0.66
TTC39C-209ENST00000584250 SPANXA2-OT1Q8N9U9 137 aa10.86□□□□□ -0.67
TTC39C-209ENST00000584250 ACYP2P14621 99 aa10.85□□□□□ -0.67
TTC39C-209ENST00000584250 A6NN06 94 aa10.83□□□□□ -0.68
TTC39C-209ENST00000584250 P0C880 135 aa10.82□□□□□ -0.68
TTC39C-209ENST00000584250 SYNE2Q8WXH0 6885 aaKnown RBP10.79□□□□□ -0.68
TTC39C-209ENST00000584250 KRTAP10-5P60370 271 aa10.78□□□□□ -0.68
TTC39C-209ENST00000584250 CYSTM1Q9H1C7 97 aa10.77□□□□□ -0.69
TTC39C-209ENST00000584250 CCDC179H3BU77 68 aa10.72□□□□□ -0.69
TTC39C-209ENST00000584250 H7BZZ5 65 aa10.72□□□□□ -0.69
TTC39C-209ENST00000584250 CHKB-CPT1BH3BT56 60 aa10.67□□□□□ -0.7
TTC39C-209ENST00000584250 R4GN34 69 aa10.62□□□□□ -0.71
TTC39C-209ENST00000584250 SPTSSBQ8NFR3 76 aa10.6□□□□□ -0.71
TTC39C-209ENST00000584250 M0QZ58 72 aa10.59□□□□□ -0.71
TTC39C-209ENST00000584250 KRTAP6-3Q3LI67 103 aa10.59□□□□□ -0.71
TTC39C-209ENST00000584250 COA5Q86WW8 74 aa10.54□□□□□ -0.72
TTC39C-209ENST00000584250 MT1XP80297 61 aa10.48□□□□□ -0.73
TTC39C-209ENST00000584250 LINC01554Q52M75 96 aa10.45□□□□□ -0.74
TTC39C-209ENST00000584250 PLAC4Q8WY50 150 aa10.45□□□□□ -0.74
TTC39C-209ENST00000584250 ATP5EP56381 51 aaPredicted RBP10.38□□□□□ -0.75
TTC39C-209ENST00000584250 TMEM258P61165 79 aa10.32□□□□□ -0.76
TTC39C-209ENST00000584250 PRO2289Q9P1D8 64 aa10.32□□□□□ -0.76
TTC39C-209ENST00000584250 KRTAP13-4Q3LI77 160 aa10.22□□□□□ -0.77
TTC39C-209ENST00000584250 KRTAP5-9P26371 169 aa10.2□□□□□ -0.78
TTC39C-209ENST00000584250 SEC61GP60059 68 aa10.14□□□□□ -0.79
TTC39C-209ENST00000584250 KMT2DO14686 5537 aa10.13□□□□□ -0.79
TTC39C-209ENST00000584250 MUC12Q9UKN1 5478 aa10.12□□□□□ -0.79
TTC39C-209ENST00000584250 PCP4P48539 62 aa10.12□□□□□ -0.79
TTC39C-209ENST00000584250 SERP1Q9Y6X1 66 aa10.12□□□□□ -0.79
TTC39C-209ENST00000584250 KRTAP12-2P59991 146 aa10.09□□□□□ -0.79
TTC39C-209ENST00000584250 NEBP20929 6669 aa10.09□□□□□ -0.79
TTC39C-209ENST00000584250 KRTAP10-7P60409 375 aaPredicted RBP10.02□□□□□ -0.81
TTC39C-209ENST00000584250 KRTAP4-8A0A0G2JLE6 195 aa10.01□□□□□ -0.81
TTC39C-209ENST00000584250 KRTAP4-8Q9BYQ9 185 aa10.01□□□□□ -0.81
TTC39C-209ENST00000584250 A0A1B0GU69 56 aa9.99□□□□□ -0.81
TTC39C-209ENST00000584250 KRTAP8-1Q8IUC2 63 aa9.97□□□□□ -0.81
TTC39C-209ENST00000584250 SPRR2FQ96RM1 72 aa9.96□□□□□ -0.82
TTC39C-209ENST00000584250 A0A1B0GU33 70 aa9.92□□□□□ -0.82
TTC39C-209ENST00000584250 KRTAP10-12P60413 245 aa9.91□□□□□ -0.82
TTC39C-209ENST00000584250 SPATA8Q6RVD6 105 aa9.9□□□□□ -0.82
TTC39C-209ENST00000584250 LINC01558Q9Y6Z2 57 aa9.89□□□□□ -0.83
TTC39C-209ENST00000584250 MDN1Q9NU22 5596 aa9.87□□□□□ -0.83
TTC39C-209ENST00000584250 A0A0D9SG42 100 aa9.86□□□□□ -0.83
TTC39C-209ENST00000584250 PRR15LQ9BU68 103 aa9.85□□□□□ -0.83
TTC39C-209ENST00000584250 KRTAP20-1Q3LI63 56 aa9.81□□□□□ -0.84
TTC39C-209ENST00000584250 CAMK2N1Q7Z7J9 78 aa9.79□□□□□ -0.84
TTC39C-209ENST00000584250 SPRR2EP22531 72 aa9.76□□□□□ -0.85
TTC39C-209ENST00000584250 SPRR2BP35325 72 aa9.76□□□□□ -0.85
TTC39C-209ENST00000584250 SPRR2AP35326 72 aa9.76□□□□□ -0.85
TTC39C-209ENST00000584250 LCE1AQ5T7P2 110 aa9.7□□□□□ -0.86
TTC39C-209ENST00000584250 KRTAP12-1P59990 96 aa9.68□□□□□ -0.86
TTC39C-209ENST00000584250 SPINT4Q6UDR6 99 aa9.67□□□□□ -0.86
TTC39C-209ENST00000584250 V9GYY9 64 aa9.65□□□□□ -0.86
TTC39C-209ENST00000584250 SMIM26A0A096LP01 95 aa9.64□□□□□ -0.87
TTC39C-209ENST00000584250 RPS28P62857 69 aaKnown RBP9.63□□□□□ -0.87
TTC39C-209ENST00000584250 Q1T7F1 81 aa9.62□□□□□ -0.87
TTC39C-209ENST00000584250 A8MU10 97 aa9.59□□□□□ -0.87
TTC39C-209ENST00000584250 KRTAP2-3P0C7H8 128 aa9.55□□□□□ -0.88
TTC39C-209ENST00000584250 KRTAP2-4Q9BYR9 128 aa9.55□□□□□ -0.88
TTC39C-209ENST00000584250 UQCR11O14957 56 aa9.54□□□□□ -0.88
TTC39C-209ENST00000584250 PSPHP1O15172 72 aa9.53□□□□□ -0.88
TTC39C-209ENST00000584250 SPRR2DP22532 72 aa9.42□□□□□ -0.9
TTC39C-209ENST00000584250 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
TTC39C-209ENST00000584250 KRTAP19-7Q3SYF9 63 aa9.37□□□□□ -0.91
TTC39C-209ENST00000584250 C10orf95Q9H7T3 257 aa9.26□□□□□ -0.93
TTC39C-209ENST00000584250 MT1EP04732 61 aa9.25□□□□□ -0.93
TTC39C-209ENST00000584250 KRTAP2-2Q9BYT5 123 aa9.25□□□□□ -0.93
TTC39C-209ENST00000584250 KRTAP2-1Q9BYU5 128 aa9.25□□□□□ -0.93
TTC39C-209ENST00000584250 A6NED7 52 aa9.24□□□□□ -0.93
TTC39C-209ENST00000584250 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
TTC39C-209ENST00000584250 KRTAP4-6Q9BYQ5 205 aa9.21□□□□□ -0.94
TTC39C-209ENST00000584250 KRTAP19-5Q3LI72 72 aa9.18□□□□□ -0.94
TTC39C-209ENST00000584250 LCE3BQ5TA77 95 aa9.16□□□□□ -0.94
TTC39C-209ENST00000584250 LCE5AQ5TCM9 118 aa9.11□□□□□ -0.95
TTC39C-209ENST00000584250 KRTAP19-3Q7Z4W3 81 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms