RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	SMIM20	Q8N5G0	67 aa		4.74	□□□□□ -1.65
NARF-222	ENST00000583908	MT1F	P04733	61 aa		4.72	□□□□□ -1.65
NARF-222	ENST00000583908	KRTAP19-4	Q3LI73	84 aa		4.72	□□□□□ -1.65
NARF-222	ENST00000583908	MT-ATP8	P03928	68 aa		4.7	□□□□□ -1.66
NARF-222	ENST00000583908	KRTAP19-1	Q8IUB9	90 aa		4.7	□□□□□ -1.66
NARF-222	ENST00000583908	KRTAP3-1	Q9BYR8	98 aa		4.7	□□□□□ -1.66
NARF-222	ENST00000583908	CRCT1	Q9UGL9	99 aa		4.7	□□□□□ -1.66
NARF-222	ENST00000583908	FAM236A	A0A1B0GUQ0	79 aa		4.69	□□□□□ -1.66
NARF-222	ENST00000583908	FAM236B	A0A1B0GV22	79 aa		4.69	□□□□□ -1.66
NARF-222	ENST00000583908	LCA10	Q71F78	164 aa		4.69	□□□□□ -1.66
NARF-222	ENST00000583908	NDUFC1	O43677	76 aa		4.67	□□□□□ -1.66
NARF-222	ENST00000583908	KRTAP4-12	Q9BQ66	201 aa		4.67	□□□□□ -1.66
NARF-222	ENST00000583908	TRAV7	A0A075B6U4	112 aa		4.66	□□□□□ -1.66
NARF-222	ENST00000583908	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.64	□□□□□ -1.67
NARF-222	ENST00000583908	KLKP1	Q107X0	134 aa		4.64	□□□□□ -1.67
NARF-222	ENST00000583908	KRTAP9-3	Q9BYQ3	159 aa		4.63	□□□□□ -1.67
NARF-222	ENST00000583908	LCE3B	Q5TA77	95 aa		4.61	□□□□□ -1.67
NARF-222	ENST00000583908	DMAC1	Q96GE9	116 aa		4.59	□□□□□ -1.67
NARF-222	ENST00000583908	USH2A	O75445	5202 aa		4.56	□□□□□ -1.68
NARF-222	ENST00000583908		H0YAA0	97 aa		4.56	□□□□□ -1.68
NARF-222	ENST00000583908	SERP2	Q8N6R1	65 aa		4.56	□□□□□ -1.68
NARF-222	ENST00000583908	CRIPT	Q9P021	101 aa		4.56	□□□□□ -1.68
NARF-222	ENST00000583908	SPTSSB	Q8NFR3	76 aa		4.55	□□□□□ -1.68
NARF-222	ENST00000583908	ACYP2	P14621	99 aa		4.54	□□□□□ -1.68
NARF-222	ENST00000583908	C20orf197	Q8N268	126 aa		4.54	□□□□□ -1.68
NARF-222	ENST00000583908	CHKB-CPT1B	H3BT56	60 aa		4.51	□□□□□ -1.69
NARF-222	ENST00000583908	SNURF	Q9Y675	71 aa		4.51	□□□□□ -1.69
NARF-222	ENST00000583908	LCE4A	Q5TA78	99 aa		4.49	□□□□□ -1.69
NARF-222	ENST00000583908	ADM2	Q7Z4H4	148 aa		4.49	□□□□□ -1.69
NARF-222	ENST00000583908	SPANXA2-OT1	Q8N9U9	137 aa		4.49	□□□□□ -1.69
NARF-222	ENST00000583908	SSPO	A2VEC9	5147 aa		4.49	□□□□□ -1.69
NARF-222	ENST00000583908	KRTAP23-1	A1A580	65 aa		4.48	□□□□□ -1.69
NARF-222	ENST00000583908		Q5VV11	94 aa		4.48	□□□□□ -1.69
NARF-222	ENST00000583908	SPRR2G	Q9BYE4	73 aa		4.48	□□□□□ -1.69
NARF-222	ENST00000583908	COX7C	P15954	63 aa		4.44	□□□□□ -1.7
NARF-222	ENST00000583908	KRTAP19-6	Q3LI70	58 aa		4.44	□□□□□ -1.7
NARF-222	ENST00000583908	KRTAP9-9	Q9BYP9	154 aa		4.44	□□□□□ -1.7
NARF-222	ENST00000583908	KRTAP9-4	Q9BYQ2	154 aa		4.44	□□□□□ -1.7
NARF-222	ENST00000583908	KRTAP9-7	A8MTY7	169 aa		4.43	□□□□□ -1.7
NARF-222	ENST00000583908		R4GN34	69 aa		4.43	□□□□□ -1.7
NARF-222	ENST00000583908	KRTAP19-8	Q3LI54	63 aa		4.41	□□□□□ -1.7
NARF-222	ENST00000583908	ANAPC13	Q9BS18	74 aa		4.39	□□□□□ -1.71
NARF-222	ENST00000583908	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.39	□□□□□ -1.71
NARF-222	ENST00000583908	MACF1	Q9UPN3	7388 aa	Known RBP	4.38	□□□□□ -1.71
NARF-222	ENST00000583908		A6NN06	94 aa		4.37	□□□□□ -1.71
NARF-222	ENST00000583908		M0QZ58	72 aa		4.36	□□□□□ -1.71
NARF-222	ENST00000583908	MT1B	P07438	61 aa		4.35	□□□□□ -1.71
NARF-222	ENST00000583908		P0C880	135 aa		4.34	□□□□□ -1.71
NARF-222	ENST00000583908	COA5	Q86WW8	74 aa		4.34	□□□□□ -1.71
NARF-222	ENST00000583908	SYNE2	Q8WXH0	6885 aa	Known RBP	4.33	□□□□□ -1.72
NARF-222	ENST00000583908	PLAC4	Q8WY50	150 aa		4.33	□□□□□ -1.72
NARF-222	ENST00000583908	SEC61G	P60059	68 aa		4.32	□□□□□ -1.72
NARF-222	ENST00000583908		H7BZZ5	65 aa		4.31	□□□□□ -1.72
NARF-222	ENST00000583908	PRO2289	Q9P1D8	64 aa		4.31	□□□□□ -1.72
NARF-222	ENST00000583908	KRTAP4-8	A0A0G2JLE6	195 aa		4.3	□□□□□ -1.72
NARF-222	ENST00000583908	LINC01554	Q52M75	96 aa		4.29	□□□□□ -1.72
NARF-222	ENST00000583908	LCE1D	Q5T752	114 aa		4.28	□□□□□ -1.72
NARF-222	ENST00000583908	SERP1	Q9Y6X1	66 aa		4.28	□□□□□ -1.72
NARF-222	ENST00000583908	ATP5E	P56381	51 aa	Predicted RBP	4.27	□□□□□ -1.73
NARF-222	ENST00000583908	KRTAP10-5	P60370	271 aa		4.27	□□□□□ -1.73
NARF-222	ENST00000583908	CYSTM1	Q9H1C7	97 aa		4.23	□□□□□ -1.73
NARF-222	ENST00000583908	CCDC179	H3BU77	68 aa		4.21	□□□□□ -1.74
NARF-222	ENST00000583908	TMEM258	P61165	79 aa		4.17	□□□□□ -1.74
NARF-222	ENST00000583908		A0A1B0GU69	56 aa		4.16	□□□□□ -1.74
NARF-222	ENST00000583908	KRTAP6-3	Q3LI67	103 aa		4.15	□□□□□ -1.75
NARF-222	ENST00000583908	LCE5A	Q5TCM9	118 aa		4.15	□□□□□ -1.75
NARF-222	ENST00000583908	PRR15L	Q9BU68	103 aa		4.15	□□□□□ -1.75
NARF-222	ENST00000583908		A0A1B0GU33	70 aa		4.14	□□□□□ -1.75
NARF-222	ENST00000583908	KRTAP4-7	Q9BYR0	210 aa		4.13	□□□□□ -1.75
NARF-222	ENST00000583908	MT1X	P80297	61 aa		4.12	□□□□□ -1.75
NARF-222	ENST00000583908	CAMK2N1	Q7Z7J9	78 aa		4.11	□□□□□ -1.75
NARF-222	ENST00000583908	KRTAP4-9	Q9BYQ8	210 aa		4.11	□□□□□ -1.75
NARF-222	ENST00000583908	KRTAP15-1	Q3LI76	137 aa		4.1	□□□□□ -1.75
NARF-222	ENST00000583908	RPS28	P62857	69 aa	Known RBP	4.09	□□□□□ -1.75
NARF-222	ENST00000583908	KRTAP13-4	Q3LI77	160 aa		4.09	□□□□□ -1.75
NARF-222	ENST00000583908	SMIM26	A0A096LP01	95 aa		4.07	□□□□□ -1.76
NARF-222	ENST00000583908		A0A0D9SG42	100 aa		4.07	□□□□□ -1.76
NARF-222	ENST00000583908	KRTAP12-2	P59991	146 aa		4.07	□□□□□ -1.76
NARF-222	ENST00000583908	NEB	P20929	6669 aa		4.05	□□□□□ -1.76
NARF-222	ENST00000583908	SPATA8	Q6RVD6	105 aa		4.04	□□□□□ -1.76
NARF-222	ENST00000583908	SPINT4	Q6UDR6	99 aa		4.02	□□□□□ -1.77
NARF-222	ENST00000583908	LINC01558	Q9Y6Z2	57 aa		4.02	□□□□□ -1.77
NARF-222	ENST00000583908	KRTAP4-11	Q9BYQ6	195 aa		4.01	□□□□□ -1.77
NARF-222	ENST00000583908	PRO0628	Q9UI54	55 aa		4.01	□□□□□ -1.77
NARF-222	ENST00000583908	KRTAP8-1	Q8IUC2	63 aa		4	□□□□□ -1.77
NARF-222	ENST00000583908	KRTAP5-9	P26371	169 aa		3.99	□□□□□ -1.77
NARF-222	ENST00000583908		V9GYY9	64 aa		3.99	□□□□□ -1.77
NARF-222	ENST00000583908	MUC12	Q9UKN1	5478 aa		3.97	□□□□□ -1.77
NARF-222	ENST00000583908	KMT2D	O14686	5537 aa		3.95	□□□□□ -1.78
NARF-222	ENST00000583908	UQCR11	O14957	56 aa		3.95	□□□□□ -1.78
NARF-222	ENST00000583908	KRTAP4-2	Q9BYR5	136 aa		3.95	□□□□□ -1.78
NARF-222	ENST00000583908	KRTAP12-1	P59990	96 aa		3.94	□□□□□ -1.78
NARF-222	ENST00000583908	KRTAP10-12	P60413	245 aa		3.94	□□□□□ -1.78
NARF-222	ENST00000583908	SPRR2F	Q96RM1	72 aa		3.94	□□□□□ -1.78
NARF-222	ENST00000583908	KRTAP10-7	P60409	375 aa	Predicted RBP	3.93	□□□□□ -1.78
NARF-222	ENST00000583908		A8MU10	97 aa		3.91	□□□□□ -1.78
NARF-222	ENST00000583908	MDN1	Q9NU22	5596 aa		3.89	□□□□□ -1.79
NARF-222	ENST00000583908		K7ERS5	55 aa		3.87	□□□□□ -1.79
NARF-222	ENST00000583908	SPRR2E	P22531	72 aa		3.86	□□□□□ -1.79
NARF-222	ENST00000583908	SPRR2B	P35325	72 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms