RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 TRAV7A0A075B6U4 112 aa8.52□□□□□ -1.05
LIMD2-211ENST00000583211 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
LIMD2-211ENST00000583211 LCE2BO14633 110 aa8.46□□□□□ -1.06
LIMD2-211ENST00000583211 NDUFC1O43677 76 aa8.43□□□□□ -1.06
LIMD2-211ENST00000583211 USH2AO75445 5202 aa8.41□□□□□ -1.06
LIMD2-211ENST00000583211 DMAC1Q96GE9 116 aa8.4□□□□□ -1.06
LIMD2-211ENST00000583211 SERP2Q8N6R1 65 aa8.35□□□□□ -1.07
LIMD2-211ENST00000583211 H0YAA0 97 aa8.31□□□□□ -1.08
LIMD2-211ENST00000583211 SNURFQ9Y675 71 aa8.3□□□□□ -1.08
LIMD2-211ENST00000583211 SSPOA2VEC9 5147 aa8.27□□□□□ -1.08
LIMD2-211ENST00000583211 KRTAP19-1Q8IUB9 90 aa8.26□□□□□ -1.09
LIMD2-211ENST00000583211 C20orf197Q8N268 126 aa8.26□□□□□ -1.09
LIMD2-211ENST00000583211 ACYP2P14621 99 aa8.25□□□□□ -1.09
LIMD2-211ENST00000583211 CRIPTQ9P021 101 aa8.24□□□□□ -1.09
LIMD2-211ENST00000583211 SPRR2GQ9BYE4 73 aa8.23□□□□□ -1.09
LIMD2-211ENST00000583211 SPANXA2-OT1Q8N9U9 137 aa8.2□□□□□ -1.1
LIMD2-211ENST00000583211 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
LIMD2-211ENST00000583211 COX7CP15954 63 aa8.16□□□□□ -1.1
LIMD2-211ENST00000583211 KRTAP19-6Q3LI70 58 aa8.16□□□□□ -1.1
LIMD2-211ENST00000583211 KRTAP19-8Q3LI54 63 aa8.12□□□□□ -1.11
LIMD2-211ENST00000583211 SPTSSBQ8NFR3 76 aa8.11□□□□□ -1.11
LIMD2-211ENST00000583211 Q5VV11 94 aa8.1□□□□□ -1.11
LIMD2-211ENST00000583211 CHKB-CPT1BH3BT56 60 aa8.08□□□□□ -1.12
LIMD2-211ENST00000583211 MT1BP07438 61 aa8.06□□□□□ -1.12
LIMD2-211ENST00000583211 FCGBPQ9Y6R7 5405 aaPredicted RBP8.03□□□□□ -1.12
LIMD2-211ENST00000583211 P0C880 135 aa8.01□□□□□ -1.13
LIMD2-211ENST00000583211 ANAPC13Q9BS18 74 aa8.01□□□□□ -1.13
LIMD2-211ENST00000583211 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
LIMD2-211ENST00000583211 H7BZZ5 65 aa7.98□□□□□ -1.13
LIMD2-211ENST00000583211 R4GN34 69 aa7.97□□□□□ -1.13
LIMD2-211ENST00000583211 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.96□□□□□ -1.14
LIMD2-211ENST00000583211 CYSTM1Q9H1C7 97 aa7.96□□□□□ -1.14
LIMD2-211ENST00000583211 COA5Q86WW8 74 aa7.92□□□□□ -1.14
LIMD2-211ENST00000583211 M0QZ58 72 aa7.9□□□□□ -1.14
LIMD2-211ENST00000583211 A6NN06 94 aa7.88□□□□□ -1.15
LIMD2-211ENST00000583211 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
LIMD2-211ENST00000583211 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
LIMD2-211ENST00000583211 PLAC4Q8WY50 150 aa7.79□□□□□ -1.16
LIMD2-211ENST00000583211 MACF1Q9UPN3 7388 aaKnown RBP7.77□□□□□ -1.16
LIMD2-211ENST00000583211 KRTAP9-7A8MTY7 169 aa7.77□□□□□ -1.17
LIMD2-211ENST00000583211 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
LIMD2-211ENST00000583211 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
LIMD2-211ENST00000583211 SEC61GP60059 68 aa7.7□□□□□ -1.18
LIMD2-211ENST00000583211 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
LIMD2-211ENST00000583211 SERP1Q9Y6X1 66 aa7.68□□□□□ -1.18
LIMD2-211ENST00000583211 SYNE2Q8WXH0 6885 aaKnown RBP7.64□□□□□ -1.19
LIMD2-211ENST00000583211 MT1XP80297 61 aa7.64□□□□□ -1.19
LIMD2-211ENST00000583211 TMEM258P61165 79 aa7.6□□□□□ -1.19
LIMD2-211ENST00000583211 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
LIMD2-211ENST00000583211 KRTAP6-3Q3LI67 103 aa7.55□□□□□ -1.2
LIMD2-211ENST00000583211 A0A1B0GU33 70 aa7.53□□□□□ -1.2
LIMD2-211ENST00000583211 A0A1B0GU69 56 aa7.52□□□□□ -1.21
LIMD2-211ENST00000583211 PCP4P48539 62 aa7.5□□□□□ -1.21
LIMD2-211ENST00000583211 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
LIMD2-211ENST00000583211 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
LIMD2-211ENST00000583211 PRR15LQ9BU68 103 aa7.41□□□□□ -1.22
LIMD2-211ENST00000583211 A0A0D9SG42 100 aa7.39□□□□□ -1.23
LIMD2-211ENST00000583211 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
LIMD2-211ENST00000583211 CAMK2N1Q7Z7J9 78 aa7.36□□□□□ -1.23
LIMD2-211ENST00000583211 KRTAP5-9P26371 169 aa7.35□□□□□ -1.23
LIMD2-211ENST00000583211 SMIM26A0A096LP01 95 aa7.33□□□□□ -1.24
LIMD2-211ENST00000583211 KMT2DO14686 5537 aa7.28□□□□□ -1.24
LIMD2-211ENST00000583211 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
LIMD2-211ENST00000583211 KRTAP10-7P60409 375 aaPredicted RBP7.28□□□□□ -1.24
LIMD2-211ENST00000583211 KRTAP10-12P60413 245 aa7.28□□□□□ -1.24
LIMD2-211ENST00000583211 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
LIMD2-211ENST00000583211 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
LIMD2-211ENST00000583211 A8MU10 97 aa7.21□□□□□ -1.26
LIMD2-211ENST00000583211 MUC12Q9UKN1 5478 aa7.19□□□□□ -1.26
LIMD2-211ENST00000583211 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
LIMD2-211ENST00000583211 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
LIMD2-211ENST00000583211 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
LIMD2-211ENST00000583211 UQCR11O14957 56 aa7.16□□□□□ -1.26
LIMD2-211ENST00000583211 V9GYY9 64 aa7.15□□□□□ -1.26
LIMD2-211ENST00000583211 NEBP20929 6669 aa7.14□□□□□ -1.27
LIMD2-211ENST00000583211 Q1T7F1 81 aa7.1□□□□□ -1.27
LIMD2-211ENST00000583211 PSPHP1O15172 72 aa7.01□□□□□ -1.29
LIMD2-211ENST00000583211 MIR22HGQ0VDD5 57 aa7□□□□□ -1.29
LIMD2-211ENST00000583211 SPRR2EP22531 72 aa6.99□□□□□ -1.29
LIMD2-211ENST00000583211 SPRR2BP35325 72 aa6.99□□□□□ -1.29
LIMD2-211ENST00000583211 SPRR2AP35326 72 aa6.99□□□□□ -1.29
LIMD2-211ENST00000583211 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
LIMD2-211ENST00000583211 MDN1Q9NU22 5596 aa6.99□□□□□ -1.29
LIMD2-211ENST00000583211 LCE1AQ5T7P2 110 aa6.94□□□□□ -1.3
LIMD2-211ENST00000583211 C10orf95Q9H7T3 257 aa6.93□□□□□ -1.3
LIMD2-211ENST00000583211 TNP1P09430 55 aa6.88□□□□□ -1.31
LIMD2-211ENST00000583211 KRTAP20-1Q3LI63 56 aa6.85□□□□□ -1.31
LIMD2-211ENST00000583211 K7ERS5 55 aa6.84□□□□□ -1.31
LIMD2-211ENST00000583211 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
LIMD2-211ENST00000583211 A6NED7 52 aa6.81□□□□□ -1.32
LIMD2-211ENST00000583211 KRTAP2-3P0C7H8 128 aa6.76□□□□□ -1.33
LIMD2-211ENST00000583211 SPRR2DP22532 72 aa6.76□□□□□ -1.33
LIMD2-211ENST00000583211 KRTAP2-4Q9BYR9 128 aa6.76□□□□□ -1.33
LIMD2-211ENST00000583211 MT1EP04732 61 aa6.75□□□□□ -1.33
LIMD2-211ENST00000583211 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
LIMD2-211ENST00000583211 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
LIMD2-211ENST00000583211 KRTAP25-1Q3LHN0 102 aa6.65□□□□□ -1.34
LIMD2-211ENST00000583211 KRTAP19-3Q7Z4W3 81 aa6.65□□□□□ -1.34
LIMD2-211ENST00000583211 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
LIMD2-211ENST00000583211 CDC42SE1Q9NRR8 79 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms