RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 LINC01554Q52M75 96 aa9.4□□□□□ -0.9
ERBB2-212ENST00000582788 ADM2Q7Z4H4 148 aa9.4□□□□□ -0.9
ERBB2-212ENST00000582788 MYCBP2O75592 4640 aa9.39□□□□□ -0.91
ERBB2-212ENST00000582788 C9orf92A6NGG3 77 aa9.37□□□□□ -0.91
ERBB2-212ENST00000582788 MT1HL1P0DM35 61 aa9.36□□□□□ -0.91
ERBB2-212ENST00000582788 A8MUU9 505 aa9.28□□□□□ -0.92
ERBB2-212ENST00000582788 C20orf166-AS1Q96NR2 134 aa9.28□□□□□ -0.92
ERBB2-212ENST00000582788 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
ERBB2-212ENST00000582788 J3QL48 77 aa9.21□□□□□ -0.93
ERBB2-212ENST00000582788 CSAG1Q6PB30 78 aa9.21□□□□□ -0.93
ERBB2-212ENST00000582788 HERC1Q15751 4861 aa9.19□□□□□ -0.94
ERBB2-212ENST00000582788 KRTAP3-1Q9BYR8 98 aa9.19□□□□□ -0.94
ERBB2-212ENST00000582788 H0YAA0 97 aa9.12□□□□□ -0.95
ERBB2-212ENST00000582788 XP32Q5T750 250 aa9.08□□□□□ -0.96
ERBB2-212ENST00000582788 A0A1B0GU33 70 aa9.05□□□□□ -0.96
ERBB2-212ENST00000582788 RPL37P61927 97 aaKnown RBP9.04□□□□□ -0.96
ERBB2-212ENST00000582788 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
ERBB2-212ENST00000582788 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
ERBB2-212ENST00000582788 KRTAP25-1Q3LHN0 102 aa9□□□□□ -0.97
ERBB2-212ENST00000582788 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
ERBB2-212ENST00000582788 HMCN2Q8NDA2 5059 aa8.94□□□□□ -0.98
ERBB2-212ENST00000582788 LPAP08519 4548 aa8.92□□□□□ -0.98
ERBB2-212ENST00000582788 K7ERS5 55 aa8.9□□□□□ -0.98
ERBB2-212ENST00000582788 LRP2P98164 4655 aa8.88□□□□□ -0.99
ERBB2-212ENST00000582788 H3BS24 57 aa8.86□□□□□ -0.99
ERBB2-212ENST00000582788 ROMO1P60602 79 aa8.81□□□□□ -1
ERBB2-212ENST00000582788 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
ERBB2-212ENST00000582788 KRTAP10-6P60371 365 aaPredicted RBP8.76□□□□□ -1.01
ERBB2-212ENST00000582788 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
ERBB2-212ENST00000582788 KRTAP13-4Q3LI77 160 aa8.68□□□□□ -1.02
ERBB2-212ENST00000582788 S4R3F8 94 aa8.68□□□□□ -1.02
ERBB2-212ENST00000582788 UBR4Q5T4S7 5183 aa8.66□□□□□ -1.02
ERBB2-212ENST00000582788 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
ERBB2-212ENST00000582788 A0A0D9SG42 100 aa8.57□□□□□ -1.04
ERBB2-212ENST00000582788 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
ERBB2-212ENST00000582788 P0C880 135 aa8.56□□□□□ -1.04
ERBB2-212ENST00000582788 MUC17Q685J3 4493 aa8.55□□□□□ -1.04
ERBB2-212ENST00000582788 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
ERBB2-212ENST00000582788 RNF213Q63HN8 5207 aa8.45□□□□□ -1.06
ERBB2-212ENST00000582788 KRTAP12-2P59991 146 aa8.39□□□□□ -1.07
ERBB2-212ENST00000582788 SPINT4Q6UDR6 99 aa8.38□□□□□ -1.07
ERBB2-212ENST00000582788 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
ERBB2-212ENST00000582788 MUC2Q02817 5179 aa8.33□□□□□ -1.08
ERBB2-212ENST00000582788 KRTAP19-2Q3LHN2 52 aa8.33□□□□□ -1.08
ERBB2-212ENST00000582788 C10orf95Q9H7T3 257 aa8.29□□□□□ -1.08
ERBB2-212ENST00000582788 M0QZ58 72 aa8.28□□□□□ -1.08
ERBB2-212ENST00000582788 KRTAP15-1Q3LI76 137 aa8.27□□□□□ -1.09
ERBB2-212ENST00000582788 NDUFAF8A1L188 74 aa8.09□□□□□ -1.11
ERBB2-212ENST00000582788 FLGP20930 4061 aaPredicted RBP8.09□□□□□ -1.11
ERBB2-212ENST00000582788 FAT4Q6V0I7 4981 aa8.07□□□□□ -1.12
ERBB2-212ENST00000582788 LCE2CQ5TA81 110 aa8.05□□□□□ -1.12
ERBB2-212ENST00000582788 R4GN34 69 aa8.03□□□□□ -1.12
ERBB2-212ENST00000582788 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
ERBB2-212ENST00000582788 LCE2AQ5TA79 106 aaPredicted RBP7.9□□□□□ -1.15
ERBB2-212ENST00000582788 MT1HP80294 61 aa7.87□□□□□ -1.15
ERBB2-212ENST00000582788 M0R2T5 61 aa7.79□□□□□ -1.16
ERBB2-212ENST00000582788 PLAC4Q8WY50 150 aa7.77□□□□□ -1.17
ERBB2-212ENST00000582788 PP632Q6XCG6 107 aa7.71□□□□□ -1.17
ERBB2-212ENST00000582788 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
ERBB2-212ENST00000582788 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
ERBB2-212ENST00000582788 MT2AP02795 61 aa7.6□□□□□ -1.19
ERBB2-212ENST00000582788 MT1FP04733 61 aa7.57□□□□□ -1.2
ERBB2-212ENST00000582788 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
ERBB2-212ENST00000582788 LUZP6Q538Z0 58 aa7.51□□□□□ -1.21
ERBB2-212ENST00000582788 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
ERBB2-212ENST00000582788 SPRR2GQ9BYE4 73 aa7.51□□□□□ -1.21
ERBB2-212ENST00000582788 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
ERBB2-212ENST00000582788 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
ERBB2-212ENST00000582788 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.22
ERBB2-212ENST00000582788 TNP1P09430 55 aa7.37□□□□□ -1.23
ERBB2-212ENST00000582788 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
ERBB2-212ENST00000582788 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
ERBB2-212ENST00000582788 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
ERBB2-212ENST00000582788 SPRR5A0A1B0GTR4 108 aa7.28□□□□□ -1.24
ERBB2-212ENST00000582788 MT1BP07438 61 aa7.21□□□□□ -1.26
ERBB2-212ENST00000582788 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
ERBB2-212ENST00000582788 FSIP2Q5CZC0 6907 aa7.15□□□□□ -1.26
ERBB2-212ENST00000582788 CRCT1Q9UGL9 99 aa7.12□□□□□ -1.27
ERBB2-212ENST00000582788 LCE2BO14633 110 aa7.11□□□□□ -1.27
ERBB2-212ENST00000582788 USH2AO75445 5202 aa7.08□□□□□ -1.28
ERBB2-212ENST00000582788 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
ERBB2-212ENST00000582788 MT1XP80297 61 aa7.01□□□□□ -1.29
ERBB2-212ENST00000582788 LCE3AQ5TA76 89 aa7□□□□□ -1.29
ERBB2-212ENST00000582788 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
ERBB2-212ENST00000582788 KRTAP8-1Q8IUC2 63 aa6.84□□□□□ -1.31
ERBB2-212ENST00000582788 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
ERBB2-212ENST00000582788 KRTAP10-7P60409 375 aaPredicted RBP6.77□□□□□ -1.33
ERBB2-212ENST00000582788 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
ERBB2-212ENST00000582788 KRTAP19-6Q3LI70 58 aa6.74□□□□□ -1.33
ERBB2-212ENST00000582788 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
ERBB2-212ENST00000582788 INE1O15225 51 aa6.69□□□□□ -1.34
ERBB2-212ENST00000582788 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
ERBB2-212ENST00000582788 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
ERBB2-212ENST00000582788 MACF1Q9UPN3 7388 aaKnown RBP6.49□□□□□ -1.37
ERBB2-212ENST00000582788 KMT2DO14686 5537 aa6.49□□□□□ -1.37
ERBB2-212ENST00000582788 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
ERBB2-212ENST00000582788 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
ERBB2-212ENST00000582788 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
ERBB2-212ENST00000582788 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
ERBB2-212ENST00000582788 SYNE2Q8WXH0 6885 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 237.7 ms