RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 Q5VSD8 79 aa5.75□□□□□ -1.49
CDK5RAP3-225ENST00000582482 KRTAP3-1Q9BYR8 98 aa5.73□□□□□ -1.49
CDK5RAP3-225ENST00000582482 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.49
CDK5RAP3-225ENST00000582482 A0A1B0GU69 56 aa5.7□□□□□ -1.5
CDK5RAP3-225ENST00000582482 A8MUU9 505 aa5.7□□□□□ -1.5
CDK5RAP3-225ENST00000582482 LRP2P98164 4655 aa5.7□□□□□ -1.5
CDK5RAP3-225ENST00000582482 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
CDK5RAP3-225ENST00000582482 C20orf166-AS1Q96NR2 134 aa5.7□□□□□ -1.5
CDK5RAP3-225ENST00000582482 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
CDK5RAP3-225ENST00000582482 KRTAP10-8P60410 259 aa5.65□□□□□ -1.51
CDK5RAP3-225ENST00000582482 KRTAP4-5Q9BYR2 181 aa5.61□□□□□ -1.51
CDK5RAP3-225ENST00000582482 ADM2Q7Z4H4 148 aa5.6□□□□□ -1.51
CDK5RAP3-225ENST00000582482 MT1HL1P0DM35 61 aa5.58□□□□□ -1.52
CDK5RAP3-225ENST00000582482 XP32Q5T750 250 aa5.57□□□□□ -1.52
CDK5RAP3-225ENST00000582482 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
CDK5RAP3-225ENST00000582482 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
CDK5RAP3-225ENST00000582482 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
CDK5RAP3-225ENST00000582482 SPATA8Q6RVD6 105 aa5.53□□□□□ -1.52
CDK5RAP3-225ENST00000582482 UQCR11O14957 56 aa5.52□□□□□ -1.53
CDK5RAP3-225ENST00000582482 H0YAA0 97 aa5.51□□□□□ -1.53
CDK5RAP3-225ENST00000582482 RPL37P61927 97 aaKnown RBP5.5□□□□□ -1.53
CDK5RAP3-225ENST00000582482 COX6B2Q6YFQ2 88 aa5.5□□□□□ -1.53
CDK5RAP3-225ENST00000582482 MUC2Q02817 5179 aa5.49□□□□□ -1.53
CDK5RAP3-225ENST00000582482 HERC2O95714 4834 aa5.45□□□□□ -1.54
CDK5RAP3-225ENST00000582482 A0A1B0GU33 70 aa5.42□□□□□ -1.54
CDK5RAP3-225ENST00000582482 LINC01554Q52M75 96 aa5.42□□□□□ -1.54
CDK5RAP3-225ENST00000582482 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
CDK5RAP3-225ENST00000582482 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.54
CDK5RAP3-225ENST00000582482 A0A0D9SG42 100 aa5.38□□□□□ -1.55
CDK5RAP3-225ENST00000582482 P0C880 135 aa5.37□□□□□ -1.55
CDK5RAP3-225ENST00000582482 KRTAP10-6P60371 365 aaPredicted RBP5.37□□□□□ -1.55
CDK5RAP3-225ENST00000582482 CRIPTQ9P021 101 aa5.37□□□□□ -1.55
CDK5RAP3-225ENST00000582482 S4R3F8 94 aa5.36□□□□□ -1.55
CDK5RAP3-225ENST00000582482 HERC1Q15751 4861 aa5.35□□□□□ -1.55
CDK5RAP3-225ENST00000582482 PCLOQ9Y6V0 5065 aa5.34□□□□□ -1.55
CDK5RAP3-225ENST00000582482 MUC17Q685J3 4493 aa5.34□□□□□ -1.56
CDK5RAP3-225ENST00000582482 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
CDK5RAP3-225ENST00000582482 KRTAP4-1Q9BYQ7 146 aa5.29□□□□□ -1.56
CDK5RAP3-225ENST00000582482 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
CDK5RAP3-225ENST00000582482 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
CDK5RAP3-225ENST00000582482 BIRC6Q9NR09 4857 aa5.24□□□□□ -1.57
CDK5RAP3-225ENST00000582482 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
CDK5RAP3-225ENST00000582482 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
CDK5RAP3-225ENST00000582482 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
CDK5RAP3-225ENST00000582482 SPINT4Q6UDR6 99 aa5.14□□□□□ -1.59
CDK5RAP3-225ENST00000582482 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
CDK5RAP3-225ENST00000582482 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
CDK5RAP3-225ENST00000582482 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
CDK5RAP3-225ENST00000582482 UBR4Q5T4S7 5183 aa5.11□□□□□ -1.59
CDK5RAP3-225ENST00000582482 ROMO1P60602 79 aa5.1□□□□□ -1.59
CDK5RAP3-225ENST00000582482 K7ERS5 55 aa5.08□□□□□ -1.6
CDK5RAP3-225ENST00000582482 KRTAP12-1P59990 96 aa5.08□□□□□ -1.6
CDK5RAP3-225ENST00000582482 SEC61BP60468 96 aaKnown RBP5.06□□□□□ -1.6
CDK5RAP3-225ENST00000582482 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
CDK5RAP3-225ENST00000582482 M0QZ58 72 aa5.05□□□□□ -1.6
CDK5RAP3-225ENST00000582482 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
CDK5RAP3-225ENST00000582482 R4GN34 69 aa4.98□□□□□ -1.61
CDK5RAP3-225ENST00000582482 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
CDK5RAP3-225ENST00000582482 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
CDK5RAP3-225ENST00000582482 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
CDK5RAP3-225ENST00000582482 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
CDK5RAP3-225ENST00000582482 KRTAP9-6A0A140TA67 174 aa4.9□□□□□ -1.62
CDK5RAP3-225ENST00000582482 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.62
CDK5RAP3-225ENST00000582482 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.62
CDK5RAP3-225ENST00000582482 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.64
CDK5RAP3-225ENST00000582482 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
CDK5RAP3-225ENST00000582482 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
CDK5RAP3-225ENST00000582482 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
CDK5RAP3-225ENST00000582482 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
CDK5RAP3-225ENST00000582482 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
CDK5RAP3-225ENST00000582482 M0R2T5 61 aa4.73□□□□□ -1.65
CDK5RAP3-225ENST00000582482 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.65
CDK5RAP3-225ENST00000582482 MT1HP80294 61 aa4.69□□□□□ -1.66
CDK5RAP3-225ENST00000582482 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
CDK5RAP3-225ENST00000582482 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
CDK5RAP3-225ENST00000582482 MT1FP04733 61 aa4.63□□□□□ -1.67
CDK5RAP3-225ENST00000582482 USH2AO75445 5202 aa4.62□□□□□ -1.67
CDK5RAP3-225ENST00000582482 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
CDK5RAP3-225ENST00000582482 MT2AP02795 61 aa4.59□□□□□ -1.67
CDK5RAP3-225ENST00000582482 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
CDK5RAP3-225ENST00000582482 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
CDK5RAP3-225ENST00000582482 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
CDK5RAP3-225ENST00000582482 KMT2DO14686 5537 aa4.47□□□□□ -1.69
CDK5RAP3-225ENST00000582482 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
CDK5RAP3-225ENST00000582482 TNP1P09430 55 aa4.45□□□□□ -1.7
CDK5RAP3-225ENST00000582482 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
CDK5RAP3-225ENST00000582482 MT1BP07438 61 aa4.4□□□□□ -1.7
CDK5RAP3-225ENST00000582482 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
CDK5RAP3-225ENST00000582482 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
CDK5RAP3-225ENST00000582482 MT1XP80297 61 aa4.35□□□□□ -1.71
CDK5RAP3-225ENST00000582482 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.71
CDK5RAP3-225ENST00000582482 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
CDK5RAP3-225ENST00000582482 PP632Q6XCG6 107 aa4.34□□□□□ -1.72
CDK5RAP3-225ENST00000582482 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
CDK5RAP3-225ENST00000582482 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
CDK5RAP3-225ENST00000582482 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
CDK5RAP3-225ENST00000582482 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
CDK5RAP3-225ENST00000582482 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
CDK5RAP3-225ENST00000582482 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
CDK5RAP3-225ENST00000582482 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms