RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 LINC00208Q96KT6 92 aa6.22□□□□□ -1.41
TRAF4-214ENST00000580073 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
TRAF4-214ENST00000580073 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
TRAF4-214ENST00000580073 SCGB1A1P11684 91 aa6.2□□□□□ -1.42
TRAF4-214ENST00000580073 C5orf47Q569G3 176 aa6.19□□□□□ -1.42
TRAF4-214ENST00000580073 MP68P56378 58 aa6.16□□□□□ -1.42
TRAF4-214ENST00000580073 A6NN06 94 aa6.14□□□□□ -1.43
TRAF4-214ENST00000580073 TRAV7A0A075B6U4 112 aa6.13□□□□□ -1.43
TRAF4-214ENST00000580073 LCA10Q71F78 164 aa6.13□□□□□ -1.43
TRAF4-214ENST00000580073 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
TRAF4-214ENST00000580073 H3BPC8 53 aa6.12□□□□□ -1.43
TRAF4-214ENST00000580073 Q5VV11 94 aa6.11□□□□□ -1.43
TRAF4-214ENST00000580073 S4R3F8 94 aa6.11□□□□□ -1.43
TRAF4-214ENST00000580073 NEBP20929 6669 aa6.09□□□□□ -1.43
TRAF4-214ENST00000580073 SMIM20Q8N5G0 67 aa6.08□□□□□ -1.44
TRAF4-214ENST00000580073 CSAG1Q6PB30 78 aa6.06□□□□□ -1.44
TRAF4-214ENST00000580073 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
TRAF4-214ENST00000580073 SNURFQ9Y675 71 aa6.02□□□□□ -1.45
TRAF4-214ENST00000580073 MT1BP07438 61 aa6.01□□□□□ -1.45
TRAF4-214ENST00000580073 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
TRAF4-214ENST00000580073 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
TRAF4-214ENST00000580073 A8MUN3 132 aa6□□□□□ -1.45
TRAF4-214ENST00000580073 KRTAP20-1Q3LI63 56 aa6□□□□□ -1.45
TRAF4-214ENST00000580073 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
TRAF4-214ENST00000580073 MUC12Q9UKN1 5478 aa5.99□□□□□ -1.45
TRAF4-214ENST00000580073 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
TRAF4-214ENST00000580073 C20orf197Q8N268 126 aa5.97□□□□□ -1.45
TRAF4-214ENST00000580073 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
TRAF4-214ENST00000580073 CRIPTQ9P021 101 aa5.93□□□□□ -1.46
TRAF4-214ENST00000580073 NDUFC1O43677 76 aa5.92□□□□□ -1.46
TRAF4-214ENST00000580073 COX7CP15954 63 aa5.91□□□□□ -1.46
TRAF4-214ENST00000580073 CYSTM1Q9H1C7 97 aa5.9□□□□□ -1.46
TRAF4-214ENST00000580073 H0YAA0 97 aa5.84□□□□□ -1.47
TRAF4-214ENST00000580073 ACYP2P14621 99 aa5.84□□□□□ -1.47
TRAF4-214ENST00000580073 SPANXA2-OT1Q8N9U9 137 aa5.84□□□□□ -1.47
TRAF4-214ENST00000580073 ADM2Q7Z4H4 148 aa5.81□□□□□ -1.48
TRAF4-214ENST00000580073 ANAPC13Q9BS18 74 aa5.81□□□□□ -1.48
TRAF4-214ENST00000580073 H7BZZ5 65 aa5.79□□□□□ -1.48
TRAF4-214ENST00000580073 KRTAP3-2Q9BYR7 98 aa5.79□□□□□ -1.48
TRAF4-214ENST00000580073 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
TRAF4-214ENST00000580073 CCDC179H3BU77 68 aa5.77□□□□□ -1.49
TRAF4-214ENST00000580073 P0C880 135 aa5.77□□□□□ -1.49
TRAF4-214ENST00000580073 KMT2DO14686 5537 aa5.77□□□□□ -1.49
TRAF4-214ENST00000580073 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
TRAF4-214ENST00000580073 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
TRAF4-214ENST00000580073 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
TRAF4-214ENST00000580073 CHKB-CPT1BH3BT56 60 aa5.71□□□□□ -1.5
TRAF4-214ENST00000580073 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.5
TRAF4-214ENST00000580073 COA5Q86WW8 74 aa5.7□□□□□ -1.5
TRAF4-214ENST00000580073 SPRR2EP22531 72 aa5.69□□□□□ -1.5
TRAF4-214ENST00000580073 SPRR2BP35325 72 aa5.69□□□□□ -1.5
TRAF4-214ENST00000580073 SPRR2AP35326 72 aa5.69□□□□□ -1.5
TRAF4-214ENST00000580073 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
TRAF4-214ENST00000580073 PLAC4Q8WY50 150 aa5.66□□□□□ -1.5
TRAF4-214ENST00000580073 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
TRAF4-214ENST00000580073 MT1XP80297 61 aa5.59□□□□□ -1.51
TRAF4-214ENST00000580073 R4GN34 69 aa5.59□□□□□ -1.51
TRAF4-214ENST00000580073 M0QZ58 72 aa5.58□□□□□ -1.52
TRAF4-214ENST00000580073 KRTAP12-2P59991 146 aa5.58□□□□□ -1.52
TRAF4-214ENST00000580073 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
TRAF4-214ENST00000580073 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
TRAF4-214ENST00000580073 KRTAP13-4Q3LI77 160 aa5.53□□□□□ -1.52
TRAF4-214ENST00000580073 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
TRAF4-214ENST00000580073 SPRR2DP22532 72 aa5.52□□□□□ -1.53
TRAF4-214ENST00000580073 LINC01554Q52M75 96 aa5.49□□□□□ -1.53
TRAF4-214ENST00000580073 ATP5EP56381 51 aaPredicted RBP5.48□□□□□ -1.53
TRAF4-214ENST00000580073 TMEM258P61165 79 aa5.46□□□□□ -1.54
TRAF4-214ENST00000580073 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
TRAF4-214ENST00000580073 SEC61GP60059 68 aa5.38□□□□□ -1.55
TRAF4-214ENST00000580073 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
TRAF4-214ENST00000580073 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
TRAF4-214ENST00000580073 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
TRAF4-214ENST00000580073 A0A1B0GU33 70 aa5.36□□□□□ -1.55
TRAF4-214ENST00000580073 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
TRAF4-214ENST00000580073 A0A1B0GU69 56 aa5.35□□□□□ -1.55
TRAF4-214ENST00000580073 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
TRAF4-214ENST00000580073 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
TRAF4-214ENST00000580073 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
TRAF4-214ENST00000580073 A0A0D9SG42 100 aa5.3□□□□□ -1.56
TRAF4-214ENST00000580073 PCP4P48539 62 aa5.3□□□□□ -1.56
TRAF4-214ENST00000580073 A8MU10 97 aa5.24□□□□□ -1.57
TRAF4-214ENST00000580073 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
TRAF4-214ENST00000580073 PRR15LQ9BU68 103 aa5.2□□□□□ -1.58
TRAF4-214ENST00000580073 SPINT4Q6UDR6 99 aa5.18□□□□□ -1.58
TRAF4-214ENST00000580073 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
TRAF4-214ENST00000580073 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.59
TRAF4-214ENST00000580073 Q1T7F1 81 aa5.13□□□□□ -1.59
TRAF4-214ENST00000580073 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
TRAF4-214ENST00000580073 PSPHP1O15172 72 aa5.1□□□□□ -1.59
TRAF4-214ENST00000580073 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.6
TRAF4-214ENST00000580073 UQCR11O14957 56 aa5.08□□□□□ -1.6
TRAF4-214ENST00000580073 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
TRAF4-214ENST00000580073 V9GYY9 64 aa5.06□□□□□ -1.6
TRAF4-214ENST00000580073 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
TRAF4-214ENST00000580073 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
TRAF4-214ENST00000580073 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
TRAF4-214ENST00000580073 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
TRAF4-214ENST00000580073 MT1EP04732 61 aa4.98□□□□□ -1.61
TRAF4-214ENST00000580073 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
TRAF4-214ENST00000580073 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 1078.4 ms