RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 LCA10Q71F78 164 aa5.69□□□□□ -1.5
CDK5RAP3-213ENST00000579605 SMCPP49901 116 aaPredicted RBP5.66□□□□□ -1.5
CDK5RAP3-213ENST00000579605 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
CDK5RAP3-213ENST00000579605 KLKP1Q107X0 134 aa5.65□□□□□ -1.5
CDK5RAP3-213ENST00000579605 SPCS1Q9Y6A9 102 aa5.63□□□□□ -1.51
CDK5RAP3-213ENST00000579605 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
CDK5RAP3-213ENST00000579605 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
CDK5RAP3-213ENST00000579605 KRTAP3-3Q9BYR6 98 aa5.57□□□□□ -1.52
CDK5RAP3-213ENST00000579605 CRIPTQ9P021 101 aa5.56□□□□□ -1.52
CDK5RAP3-213ENST00000579605 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
CDK5RAP3-213ENST00000579605 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
CDK5RAP3-213ENST00000579605 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
CDK5RAP3-213ENST00000579605 CYP4F30PQ9H0H9 118 aa5.53□□□□□ -1.52
CDK5RAP3-213ENST00000579605 PRO2289Q9P1D8 64 aa5.53□□□□□ -1.52
CDK5RAP3-213ENST00000579605 PRO0461Q9UI25 63 aa5.53□□□□□ -1.52
CDK5RAP3-213ENST00000579605 A0A087WVE0 104 aa5.5□□□□□ -1.53
CDK5RAP3-213ENST00000579605 MT1XP80297 61 aa5.5□□□□□ -1.53
CDK5RAP3-213ENST00000579605 K7EP34 96 aa5.48□□□□□ -1.53
CDK5RAP3-213ENST00000579605 COL5A1-AS1Q5SY13 56 aa5.47□□□□□ -1.53
CDK5RAP3-213ENST00000579605 LOC101927531A0A1B0GV80 90 aa5.46□□□□□ -1.54
CDK5RAP3-213ENST00000579605 TRAV22A0A0B4J277 110 aa5.45□□□□□ -1.54
CDK5RAP3-213ENST00000579605 NDUFC1O43677 76 aa5.45□□□□□ -1.54
CDK5RAP3-213ENST00000579605 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
CDK5RAP3-213ENST00000579605 LOC105371267A0A1B0GV96 52 aa5.43□□□□□ -1.54
CDK5RAP3-213ENST00000579605 H0YAA0 97 aa5.42□□□□□ -1.54
CDK5RAP3-213ENST00000579605 GTF2H5Q6ZYL4 71 aa5.4□□□□□ -1.54
CDK5RAP3-213ENST00000579605 A8MUN3 132 aa5.38□□□□□ -1.55
CDK5RAP3-213ENST00000579605 ETDBQ3ZM63 59 aa5.38□□□□□ -1.55
CDK5RAP3-213ENST00000579605 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
CDK5RAP3-213ENST00000579605 F8W1H4 67 aa5.37□□□□□ -1.55
CDK5RAP3-213ENST00000579605 H0Y9P7 68 aa5.36□□□□□ -1.55
CDK5RAP3-213ENST00000579605 UQCRQO14949 82 aa5.36□□□□□ -1.55
CDK5RAP3-213ENST00000579605 ACYP1P07311 99 aa5.36□□□□□ -1.55
CDK5RAP3-213ENST00000579605 PLAC4Q8WY50 150 aa5.36□□□□□ -1.55
CDK5RAP3-213ENST00000579605 HMCN1Q96RW7 5635 aa5.36□□□□□ -1.55
CDK5RAP3-213ENST00000579605 ATOX1O00244 68 aa5.35□□□□□ -1.55
CDK5RAP3-213ENST00000579605 HIST1H4AP62805 103 aaKnown RBP5.32□□□□□ -1.56
CDK5RAP3-213ENST00000579605 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
CDK5RAP3-213ENST00000579605 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
CDK5RAP3-213ENST00000579605 ATP5EP2Q5VTU8 51 aa5.29□□□□□ -1.56
CDK5RAP3-213ENST00000579605 KRTAP10-7P60409 375 aaPredicted RBP5.27□□□□□ -1.57
CDK5RAP3-213ENST00000579605 R4GN34 69 aa5.26□□□□□ -1.57
CDK5RAP3-213ENST00000579605 LINC00208Q96KT6 92 aa5.25□□□□□ -1.57
CDK5RAP3-213ENST00000579605 C20orf197Q8N268 126 aa5.23□□□□□ -1.57
CDK5RAP3-213ENST00000579605 FAM240AA0A1B0GVK7 77 aa5.22□□□□□ -1.57
CDK5RAP3-213ENST00000579605 M0QZ58 72 aa5.21□□□□□ -1.58
CDK5RAP3-213ENST00000579605 P0C880 135 aa5.21□□□□□ -1.58
CDK5RAP3-213ENST00000579605 MT4P47944 62 aa5.21□□□□□ -1.58
CDK5RAP3-213ENST00000579605 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
CDK5RAP3-213ENST00000579605 MP68P56378 58 aa5.2□□□□□ -1.58
CDK5RAP3-213ENST00000579605 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
CDK5RAP3-213ENST00000579605 PCP4L1A6NKN8 68 aa5.16□□□□□ -1.58
CDK5RAP3-213ENST00000579605 LINC01554Q52M75 96 aa5.16□□□□□ -1.58
CDK5RAP3-213ENST00000579605 LINC00643Q86TS7 51 aa5.16□□□□□ -1.58
CDK5RAP3-213ENST00000579605 OCR1Q9BZK8 76 aa5.13□□□□□ -1.59
CDK5RAP3-213ENST00000579605 KRTAP3-2Q9BYR7 98 aa5.12□□□□□ -1.59
CDK5RAP3-213ENST00000579605 DMAC1Q96GE9 116 aa5.1□□□□□ -1.59
CDK5RAP3-213ENST00000579605 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
CDK5RAP3-213ENST00000579605 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
CDK5RAP3-213ENST00000579605 H3BPC8 53 aa5.08□□□□□ -1.6
CDK5RAP3-213ENST00000579605 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
CDK5RAP3-213ENST00000579605 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
CDK5RAP3-213ENST00000579605 MT-ATP8P03928 68 aa5.03□□□□□ -1.6
CDK5RAP3-213ENST00000579605 TRAV7A0A075B6U4 112 aa5□□□□□ -1.61
CDK5RAP3-213ENST00000579605 SCGB1A1P11684 91 aa5□□□□□ -1.61
CDK5RAP3-213ENST00000579605 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
CDK5RAP3-213ENST00000579605 CYSTM1Q9H1C7 97 aa4.98□□□□□ -1.61
CDK5RAP3-213ENST00000579605 ACYP2P14621 99 aa4.96□□□□□ -1.62
CDK5RAP3-213ENST00000579605 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
CDK5RAP3-213ENST00000579605 SPTSSBQ8NFR3 76 aa4.96□□□□□ -1.62
CDK5RAP3-213ENST00000579605 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
CDK5RAP3-213ENST00000579605 MT1EP04732 61 aa4.92□□□□□ -1.62
CDK5RAP3-213ENST00000579605 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
CDK5RAP3-213ENST00000579605 CHKB-CPT1BH3BT56 60 aa4.89□□□□□ -1.63
CDK5RAP3-213ENST00000579605 J3QR89 54 aa4.88□□□□□ -1.63
CDK5RAP3-213ENST00000579605 A0A1B0GV90 55 aa4.84□□□□□ -1.63
CDK5RAP3-213ENST00000579605 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
CDK5RAP3-213ENST00000579605 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
CDK5RAP3-213ENST00000579605 MT1GP13640 62 aa4.8□□□□□ -1.64
CDK5RAP3-213ENST00000579605 SMIM20Q8N5G0 67 aa4.79□□□□□ -1.64
CDK5RAP3-213ENST00000579605 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
CDK5RAP3-213ENST00000579605 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
CDK5RAP3-213ENST00000579605 MT1MQ8N339 61 aa4.73□□□□□ -1.65
CDK5RAP3-213ENST00000579605 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
CDK5RAP3-213ENST00000579605 SNURFQ9Y675 71 aa4.72□□□□□ -1.65
CDK5RAP3-213ENST00000579605 SPANXA2-OT1Q8N9U9 137 aa4.68□□□□□ -1.66
CDK5RAP3-213ENST00000579605 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
CDK5RAP3-213ENST00000579605 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
CDK5RAP3-213ENST00000579605 A0A0D9SG42 100 aa4.64□□□□□ -1.67
CDK5RAP3-213ENST00000579605 SEC61GP60059 68 aa4.62□□□□□ -1.67
CDK5RAP3-213ENST00000579605 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
CDK5RAP3-213ENST00000579605 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
CDK5RAP3-213ENST00000579605 MT1LQ93083 61 aa4.59□□□□□ -1.67
CDK5RAP3-213ENST00000579605 COA5Q86WW8 74 aa4.58□□□□□ -1.68
CDK5RAP3-213ENST00000579605 K7ERU9 68 aa4.57□□□□□ -1.68
CDK5RAP3-213ENST00000579605 SPATA8Q6RVD6 105 aa4.57□□□□□ -1.68
CDK5RAP3-213ENST00000579605 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
CDK5RAP3-213ENST00000579605 SERP2Q8N6R1 65 aa4.54□□□□□ -1.68
CDK5RAP3-213ENST00000579605 A0A1B0GU33 70 aa4.53□□□□□ -1.68
CDK5RAP3-213ENST00000579605 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms