RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 LCA10Q71F78 164 aa3.08□□□□□ -1.92
TRAF4-213ENST00000578917 LINC00208Q96KT6 92 aa3.08□□□□□ -1.92
TRAF4-213ENST00000578917 KRTAP4-8Q9BYQ9 185 aa3.08□□□□□ -1.92
TRAF4-213ENST00000578917 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
TRAF4-213ENST00000578917 NDUFC1O43677 76 aa3.04□□□□□ -1.92
TRAF4-213ENST00000578917 K7ERU9 68 aa3.03□□□□□ -1.92
TRAF4-213ENST00000578917 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
TRAF4-213ENST00000578917 OCR1Q9BZK8 76 aa3.03□□□□□ -1.92
TRAF4-213ENST00000578917 A8MUN3 132 aa3.02□□□□□ -1.93
TRAF4-213ENST00000578917 KLKP1Q107X0 134 aa3.01□□□□□ -1.93
TRAF4-213ENST00000578917 H3BPC8 53 aa3□□□□□ -1.93
TRAF4-213ENST00000578917 IMUPQ9GZP8 106 aa3□□□□□ -1.93
TRAF4-213ENST00000578917 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
TRAF4-213ENST00000578917 MT-ATP8P03928 68 aa2.98□□□□□ -1.93
TRAF4-213ENST00000578917 SMIM20Q8N5G0 67 aa2.98□□□□□ -1.93
TRAF4-213ENST00000578917 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
TRAF4-213ENST00000578917 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
TRAF4-213ENST00000578917 Q5VV11 94 aa2.96□□□□□ -1.94
TRAF4-213ENST00000578917 CRIPTQ9P021 101 aa2.96□□□□□ -1.94
TRAF4-213ENST00000578917 TRAV7A0A075B6U4 112 aa2.95□□□□□ -1.94
TRAF4-213ENST00000578917 ADM2Q7Z4H4 148 aa2.95□□□□□ -1.94
TRAF4-213ENST00000578917 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
TRAF4-213ENST00000578917 SPRR2GQ9BYE4 73 aa2.94□□□□□ -1.94
TRAF4-213ENST00000578917 A6NN06 94 aa2.92□□□□□ -1.94
TRAF4-213ENST00000578917 H0YAA0 97 aa2.92□□□□□ -1.94
TRAF4-213ENST00000578917 ACYP2P14621 99 aa2.92□□□□□ -1.94
TRAF4-213ENST00000578917 C20orf197Q8N268 126 aa2.92□□□□□ -1.94
TRAF4-213ENST00000578917 DMAC1Q96GE9 116 aa2.92□□□□□ -1.94
TRAF4-213ENST00000578917 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
TRAF4-213ENST00000578917 SPTSSBQ8NFR3 76 aa2.91□□□□□ -1.94
TRAF4-213ENST00000578917 CHKB-CPT1BH3BT56 60 aa2.9□□□□□ -1.95
TRAF4-213ENST00000578917 KRTAP19-8Q3LI54 63 aa2.9□□□□□ -1.95
TRAF4-213ENST00000578917 SNURFQ9Y675 71 aa2.9□□□□□ -1.95
TRAF4-213ENST00000578917 R4GN34 69 aa2.89□□□□□ -1.95
TRAF4-213ENST00000578917 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
TRAF4-213ENST00000578917 MT1BP07438 61 aa2.88□□□□□ -1.95
TRAF4-213ENST00000578917 SERP2Q8N6R1 65 aa2.87□□□□□ -1.95
TRAF4-213ENST00000578917 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
TRAF4-213ENST00000578917 M0QZ58 72 aa2.86□□□□□ -1.95
TRAF4-213ENST00000578917 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
TRAF4-213ENST00000578917 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
TRAF4-213ENST00000578917 P0C880 135 aa2.85□□□□□ -1.95
TRAF4-213ENST00000578917 LINC01554Q52M75 96 aa2.85□□□□□ -1.95
TRAF4-213ENST00000578917 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.95
TRAF4-213ENST00000578917 KRTAP4-8A0A0G2JLE6 195 aa2.83□□□□□ -1.96
TRAF4-213ENST00000578917 H3BS24 57 aa2.83□□□□□ -1.96
TRAF4-213ENST00000578917 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
TRAF4-213ENST00000578917 SPANXA2-OT1Q8N9U9 137 aa2.82□□□□□ -1.96
TRAF4-213ENST00000578917 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
TRAF4-213ENST00000578917 COX7CP15954 63 aa2.78□□□□□ -1.96
TRAF4-213ENST00000578917 SEC61GP60059 68 aa2.77□□□□□ -1.97
TRAF4-213ENST00000578917 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
TRAF4-213ENST00000578917 NEBP20929 6669 aa2.76□□□□□ -1.97
TRAF4-213ENST00000578917 COA5Q86WW8 74 aa2.75□□□□□ -1.97
TRAF4-213ENST00000578917 ANAPC13Q9BS18 74 aa2.75□□□□□ -1.97
TRAF4-213ENST00000578917 SERP1Q9Y6X1 66 aa2.75□□□□□ -1.97
TRAF4-213ENST00000578917 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
TRAF4-213ENST00000578917 KRTAP4-7Q9BYR0 210 aa2.74□□□□□ -1.97
TRAF4-213ENST00000578917 MT1XP80297 61 aa2.73□□□□□ -1.97
TRAF4-213ENST00000578917 KRTAP19-4Q3LI73 84 aa2.72□□□□□ -1.97
TRAF4-213ENST00000578917 H7BZZ5 65 aa2.71□□□□□ -1.98
TRAF4-213ENST00000578917 CAMK2N1Q7Z7J9 78 aa2.7□□□□□ -1.98
TRAF4-213ENST00000578917 PCP4P48539 62 aa2.68□□□□□ -1.98
TRAF4-213ENST00000578917 CYSTM1Q9H1C7 97 aa2.68□□□□□ -1.98
TRAF4-213ENST00000578917 KMT2DO14686 5537 aa2.68□□□□□ -1.98
TRAF4-213ENST00000578917 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
TRAF4-213ENST00000578917 A0A0D9SG42 100 aa2.67□□□□□ -1.98
TRAF4-213ENST00000578917 A0A1B0GU33 70 aa2.67□□□□□ -1.98
TRAF4-213ENST00000578917 KRTAP8-1Q8IUC2 63 aa2.67□□□□□ -1.98
TRAF4-213ENST00000578917 KRTAP4-9Q9BYQ8 210 aa2.67□□□□□ -1.98
TRAF4-213ENST00000578917 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
TRAF4-213ENST00000578917 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
TRAF4-213ENST00000578917 A0A1B0GU69 56 aa2.65□□□□□ -1.99
TRAF4-213ENST00000578917 CCDC179H3BU77 68 aa2.65□□□□□ -1.99
TRAF4-213ENST00000578917 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
TRAF4-213ENST00000578917 KRTAP13-4Q3LI77 160 aa2.65□□□□□ -1.99
TRAF4-213ENST00000578917 SPATA8Q6RVD6 105 aa2.65□□□□□ -1.99
TRAF4-213ENST00000578917 SPINT4Q6UDR6 99 aa2.64□□□□□ -1.99
TRAF4-213ENST00000578917 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
TRAF4-213ENST00000578917 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
TRAF4-213ENST00000578917 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
TRAF4-213ENST00000578917 KRTAP10-7P60409 375 aaPredicted RBP2.62□□□□□ -1.99
TRAF4-213ENST00000578917 SPRR2EP22531 72 aa2.61□□□□□ -1.99
TRAF4-213ENST00000578917 SPRR2BP35325 72 aa2.61□□□□□ -1.99
TRAF4-213ENST00000578917 SPRR2AP35326 72 aa2.61□□□□□ -1.99
TRAF4-213ENST00000578917 ATP5EP56381 51 aaPredicted RBP2.61□□□□□ -1.99
TRAF4-213ENST00000578917 PRR15LQ9BU68 103 aa2.61□□□□□ -1.99
TRAF4-213ENST00000578917 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
TRAF4-213ENST00000578917 SMIM26A0A096LP01 95 aa2.6□□□□□ -1.99
TRAF4-213ENST00000578917 LCE4AQ5TA78 99 aa2.6□□□□□ -1.99
TRAF4-213ENST00000578917 KRTAP10-12P60413 245 aa2.59□□□□□ -1.99
TRAF4-213ENST00000578917 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
TRAF4-213ENST00000578917 TMEM258P61165 79 aa2.56□□□□□ -2
TRAF4-213ENST00000578917 KRTAP12-1P59990 96 aa2.55□□□□□ -2
TRAF4-213ENST00000578917 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
TRAF4-213ENST00000578917 A8MU10 97 aa2.54□□□□□ -2
TRAF4-213ENST00000578917 LCE1AQ5T7P2 110 aa2.54□□□□□ -2
TRAF4-213ENST00000578917 KRTAP2-2Q9BYT5 123 aa2.53□□□□□ -2
TRAF4-213ENST00000578917 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
TRAF4-213ENST00000578917 SPRR2DP22532 72 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms