RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 MUC17Q685J3 4493 aa8.81□□□□□ -1
SREBF1-218ENST00000578469 COX6B2Q6YFQ2 88 aa8.78□□□□□ -1
SREBF1-218ENST00000578469 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
SREBF1-218ENST00000578469 V9GYY9 64 aa8.74□□□□□ -1.01
SREBF1-218ENST00000578469 Q1T7F1 81 aa8.71□□□□□ -1.02
SREBF1-218ENST00000578469 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
SREBF1-218ENST00000578469 SPTSSBQ8NFR3 76 aa8.66□□□□□ -1.02
SREBF1-218ENST00000578469 RBM12B-AS1Q9P1G2 102 aa8.64□□□□□ -1.03
SREBF1-218ENST00000578469 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
SREBF1-218ENST00000578469 CRCT1Q9UGL9 99 aa8.59□□□□□ -1.03
SREBF1-218ENST00000578469 FSIP2Q5CZC0 6907 aa8.57□□□□□ -1.04
SREBF1-218ENST00000578469 H1FX-AS1Q4G0G2 97 aa8.55□□□□□ -1.04
SREBF1-218ENST00000578469 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
SREBF1-218ENST00000578469 PSPHP1O15172 72 aa8.53□□□□□ -1.04
SREBF1-218ENST00000578469 S4R3F8 94 aa8.51□□□□□ -1.05
SREBF1-218ENST00000578469 A0A1B0GU69 56 aa8.47□□□□□ -1.05
SREBF1-218ENST00000578469 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
SREBF1-218ENST00000578469 Q5VV11 94 aa8.45□□□□□ -1.06
SREBF1-218ENST00000578469 SEC61GP60059 68 aa8.44□□□□□ -1.06
SREBF1-218ENST00000578469 LCA10Q71F78 164 aa8.44□□□□□ -1.06
SREBF1-218ENST00000578469 CSAG1Q6PB30 78 aa8.33□□□□□ -1.08
SREBF1-218ENST00000578469 A6NED7 52 aa8.32□□□□□ -1.08
SREBF1-218ENST00000578469 LCE2CQ5TA81 110 aa8.31□□□□□ -1.08
SREBF1-218ENST00000578469 MT1HP80294 61 aa8.29□□□□□ -1.08
SREBF1-218ENST00000578469 BRK1Q8WUW1 75 aa8.27□□□□□ -1.09
SREBF1-218ENST00000578469 KRTAP19-2Q3LHN2 52 aa8.25□□□□□ -1.09
SREBF1-218ENST00000578469 M0R2T5 61 aa8.22□□□□□ -1.09
SREBF1-218ENST00000578469 UQCR11O14957 56 aa8.22□□□□□ -1.09
SREBF1-218ENST00000578469 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
SREBF1-218ENST00000578469 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
SREBF1-218ENST00000578469 A0A1B0GU33 70 aa8.18□□□□□ -1.1
SREBF1-218ENST00000578469 CDC42SE1Q9NRR8 79 aa8.16□□□□□ -1.1
SREBF1-218ENST00000578469 MIR22HGQ0VDD5 57 aa8.14□□□□□ -1.11
SREBF1-218ENST00000578469 H0YAA0 97 aa8.13□□□□□ -1.11
SREBF1-218ENST00000578469 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
SREBF1-218ENST00000578469 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
SREBF1-218ENST00000578469 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
SREBF1-218ENST00000578469 FLGP20930 4061 aaPredicted RBP8.06□□□□□ -1.12
SREBF1-218ENST00000578469 KRTAP9-7A8MTY7 169 aa8.05□□□□□ -1.12
SREBF1-218ENST00000578469 P0C880 135 aa8.04□□□□□ -1.12
SREBF1-218ENST00000578469 A8MU10 97 aa8.02□□□□□ -1.13
SREBF1-218ENST00000578469 KRTAP9-1A8MXZ3 250 aaPredicted RBP8□□□□□ -1.13
SREBF1-218ENST00000578469 M0QZ58 72 aa7.93□□□□□ -1.14
SREBF1-218ENST00000578469 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
SREBF1-218ENST00000578469 USH2AO75445 5202 aa7.87□□□□□ -1.15
SREBF1-218ENST00000578469 SSPOA2VEC9 5147 aa7.87□□□□□ -1.15
SREBF1-218ENST00000578469 R4GN34 69 aa7.85□□□□□ -1.15
SREBF1-218ENST00000578469 K7ERS5 55 aa7.83□□□□□ -1.16
SREBF1-218ENST00000578469 PMAIP1Q13794 54 aa7.83□□□□□ -1.16
SREBF1-218ENST00000578469 A0A0D9SG42 100 aa7.81□□□□□ -1.16
SREBF1-218ENST00000578469 LCE2BO14633 110 aa7.8□□□□□ -1.16
SREBF1-218ENST00000578469 CRIPTQ9P021 101 aa7.79□□□□□ -1.16
SREBF1-218ENST00000578469 FCGBPQ9Y6R7 5405 aaPredicted RBP7.78□□□□□ -1.16
SREBF1-218ENST00000578469 KRTAP9-8Q9BYQ0 159 aa7.75□□□□□ -1.17
SREBF1-218ENST00000578469 A6NN06 94 aa7.73□□□□□ -1.17
SREBF1-218ENST00000578469 LINC01554Q52M75 96 aa7.7□□□□□ -1.18
SREBF1-218ENST00000578469 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
SREBF1-218ENST00000578469 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.18
SREBF1-218ENST00000578469 KRTAP12-1P59990 96 aa7.63□□□□□ -1.19
SREBF1-218ENST00000578469 MT2AP02795 61 aa7.62□□□□□ -1.19
SREBF1-218ENST00000578469 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
SREBF1-218ENST00000578469 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
SREBF1-218ENST00000578469 KRTAP12-2P59991 146 aa7.6□□□□□ -1.19
SREBF1-218ENST00000578469 SVIPQ8NHG7 77 aa7.59□□□□□ -1.19
SREBF1-218ENST00000578469 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.19
SREBF1-218ENST00000578469 MT1FP04733 61 aa7.56□□□□□ -1.2
SREBF1-218ENST00000578469 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
SREBF1-218ENST00000578469 KTN1-AS1Q86SY8 53 aa7.52□□□□□ -1.21
SREBF1-218ENST00000578469 KRTAP9-3Q9BYQ3 159 aa7.52□□□□□ -1.21
SREBF1-218ENST00000578469 ROMO1P60602 79 aa7.45□□□□□ -1.22
SREBF1-218ENST00000578469 KRTAP19-6Q3LI70 58 aa7.43□□□□□ -1.22
SREBF1-218ENST00000578469 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
SREBF1-218ENST00000578469 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
SREBF1-218ENST00000578469 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
SREBF1-218ENST00000578469 KRTAP19-8Q3LI54 63 aa7.32□□□□□ -1.24
SREBF1-218ENST00000578469 PRAC1Q96KF2 57 aa7.28□□□□□ -1.24
SREBF1-218ENST00000578469 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
SREBF1-218ENST00000578469 NEBP20929 6669 aa7.18□□□□□ -1.26
SREBF1-218ENST00000578469 MT1BP07438 61 aa7.18□□□□□ -1.26
SREBF1-218ENST00000578469 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
SREBF1-218ENST00000578469 MUC12Q9UKN1 5478 aa7.09□□□□□ -1.27
SREBF1-218ENST00000578469 TNP1P09430 55 aa7.05□□□□□ -1.28
SREBF1-218ENST00000578469 KRTAP20-1Q3LI63 56 aa7.04□□□□□ -1.28
SREBF1-218ENST00000578469 PRO2289Q9P1D8 64 aa6.99□□□□□ -1.29
SREBF1-218ENST00000578469 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
SREBF1-218ENST00000578469 MT1XP80297 61 aa6.96□□□□□ -1.3
SREBF1-218ENST00000578469 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
SREBF1-218ENST00000578469 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
SREBF1-218ENST00000578469 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
SREBF1-218ENST00000578469 MDN1Q9NU22 5596 aa6.88□□□□□ -1.31
SREBF1-218ENST00000578469 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
SREBF1-218ENST00000578469 KMT2DO14686 5537 aa6.83□□□□□ -1.32
SREBF1-218ENST00000578469 KRTAP5-9P26371 169 aa6.82□□□□□ -1.32
SREBF1-218ENST00000578469 KRTAP2-3P0C7H8 128 aa6.73□□□□□ -1.33
SREBF1-218ENST00000578469 KRTAP2-4Q9BYR9 128 aa6.73□□□□□ -1.33
SREBF1-218ENST00000578469 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
SREBF1-218ENST00000578469 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
SREBF1-218ENST00000578469 LCE3AQ5TA76 89 aa6.67□□□□□ -1.34
SREBF1-218ENST00000578469 SPRR2EP22531 72 aa6.57□□□□□ -1.36
SREBF1-218ENST00000578469 SPRR2BP35325 72 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms